Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G031600.1 | Wheat | cytosol | 94.6 | 94.88 |
| TraesCS3D01G015300.1 | Wheat | plasma membrane | 79.9 | 79.42 |
| TraesCS7D01G206600.1 | Wheat | cytosol | 16.9 | 72.53 |
| TraesCS4D01G289700.1 | Wheat | cytosol | 16.2 | 70.74 |
| Os05t0153132-00 | Rice | cytosol | 15.2 | 58.02 |
| TraesCS2D01G400600.1 | Wheat | nucleus | 55.2 | 55.2 |
| TraesCS2D01G600300.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 49.2 | 50.57 |
| TraesCS2D01G051900.1 | Wheat | cytosol | 48.6 | 49.54 |
| OQU79703 | Sorghum | cytosol | 36.3 | 42.06 |
| TraesCS5D01G272300.1 | Wheat | cytosol, nucleus, plastid | 13.0 | 38.01 |
| OQU84284 | Sorghum | mitochondrion, nucleus, plasma membrane, plastid | 30.5 | 35.97 |
| TraesCS3D01G164800.2 | Wheat | mitochondrion, nucleus, plastid | 13.5 | 35.71 |
| TraesCS3D01G164900.3 | Wheat | nucleus | 12.7 | 34.51 |
| TraesCS3D01G032000.4 | Wheat | nucleus | 35.8 | 32.17 |
| TraesCS3D01G164200.1 | Wheat | nucleus, plastid | 14.3 | 31.71 |
| TraesCS1D01G396300.1 | Wheat | nucleus | 26.3 | 30.8 |
| TraesCS5D01G272400.1 | Wheat | nucleus | 13.9 | 30.68 |
| TraesCS3D01G269000.1 | Wheat | nucleus | 16.0 | 30.19 |
| TraesCS1D01G396000.2 | Wheat | cytosol, mitochondrion, nucleus | 16.0 | 28.62 |
| TraesCS1D01G125200.2 | Wheat | plastid | 14.6 | 28.02 |
| KRH36075 | Soybean | nucleus | 12.8 | 24.24 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G015200.1 | EnsemblPlantsGene:TraesCS3D01G015200 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44422 | PANTHER:PTHR44422:SF3 | PFAM:PF00179 | PFscan:PS50127 | SEG:seg |
| SMART:SM00212 | SUPFAM:SSF54495 | TIGR:cd00195 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr3D:-:5372378..5376739
Molecular Weight (calculated)
111467.0 Da
IEP (calculated)
4.596
GRAVY (calculated)
-0.335
Length
1000 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVVPTAPSP NIYRLDLVSF GRMVLDRGLV LPDAKVGNIY LPVDKFKLLR IDDCIVRKSV SDIKVMDRSH LYTGQVVASA SDMEGQLGVI TGVNTLLNLA
101: KLDNNGMATK IIKGVSPSGL RRVRSLNLGD FVVSGPWLGR VVEVSIDIDV LFADGAICRV TDAEAVSKNL ERVTDSYTMV SMHRHQMNSR FHQGQHVIGS
201: DACSVFKAAR WLNGYWHPQR EIGRIMKVET SGVLVYWVAS MHCGTDKELV EASAPPAYQN PDDLTFFCAS YNCCWGLADR CFFLETSSTE GDAISVPDQH
301: NDDDDNEEED EDEDEEEEEQ YSACSQDNQD ECEASTSQVV PPTKQNDVRF YRKQLRKVRF EGHRWGKHLQ AMRHVEVEFP MVVANTCTTV DVLWQDGTRQ
401: HGRPSATLVP FGIVNEQEFF PGQHVVANVL PTNAAVDATG DPNDMTTTSV NNDNIAPGTR PMQRVGIVKS LQYEDQTVCV SWFKKRRHLD EVKEVECDDT
501: VSAYDLKIDS SHSAYYGDIV IRLLPSGSTD NGESIPLLQG NKKENGVDAD LSWVGRVVEL PNGHVQVKWG DGSMSTVLPH EIAVIKDKHY MELWLEMGDW
601: VEDDGTDDAP EETAAANTEI NLQNLDNDVD GVNLAMSRAS LLGFSFQSFL QLTSDVVARG KGYLMNWWPW SSSLPSSELP AHTNDDSIGG AAMETSDAAI
701: DVTSHGFAEG MKDADATCFC DEPFCFPCFD VLQISPLDHH YLDSTDKEMQ GPSRGKTWAK TVQKEWKILE NGLPETIYVR AFEDRMDLLR VVMVGASGTP
801: YHHGLFFFDL QLPPSYPDAP PQVYYHSFGL RLNPNLYECG TVCLSLLNTF GGEDTEVWSP ATSSLLQVVV SIQGLVLNDQ PYYNEAGYET LVGKPEGHRN
901: ALPYNENAYL LTLRTMQHLL CRPPRGFEEF VKEHFRRRGR FVLRTCNAWL QENVVDDADT TEATRKHPCS TGLRLALTNV APSLVAAFAK LGVEGCEEFH
101: KLDNNGMATK IIKGVSPSGL RRVRSLNLGD FVVSGPWLGR VVEVSIDIDV LFADGAICRV TDAEAVSKNL ERVTDSYTMV SMHRHQMNSR FHQGQHVIGS
201: DACSVFKAAR WLNGYWHPQR EIGRIMKVET SGVLVYWVAS MHCGTDKELV EASAPPAYQN PDDLTFFCAS YNCCWGLADR CFFLETSSTE GDAISVPDQH
301: NDDDDNEEED EDEDEEEEEQ YSACSQDNQD ECEASTSQVV PPTKQNDVRF YRKQLRKVRF EGHRWGKHLQ AMRHVEVEFP MVVANTCTTV DVLWQDGTRQ
401: HGRPSATLVP FGIVNEQEFF PGQHVVANVL PTNAAVDATG DPNDMTTTSV NNDNIAPGTR PMQRVGIVKS LQYEDQTVCV SWFKKRRHLD EVKEVECDDT
501: VSAYDLKIDS SHSAYYGDIV IRLLPSGSTD NGESIPLLQG NKKENGVDAD LSWVGRVVEL PNGHVQVKWG DGSMSTVLPH EIAVIKDKHY MELWLEMGDW
601: VEDDGTDDAP EETAAANTEI NLQNLDNDVD GVNLAMSRAS LLGFSFQSFL QLTSDVVARG KGYLMNWWPW SSSLPSSELP AHTNDDSIGG AAMETSDAAI
701: DVTSHGFAEG MKDADATCFC DEPFCFPCFD VLQISPLDHH YLDSTDKEMQ GPSRGKTWAK TVQKEWKILE NGLPETIYVR AFEDRMDLLR VVMVGASGTP
801: YHHGLFFFDL QLPPSYPDAP PQVYYHSFGL RLNPNLYECG TVCLSLLNTF GGEDTEVWSP ATSSLLQVVV SIQGLVLNDQ PYYNEAGYET LVGKPEGHRN
901: ALPYNENAYL LTLRTMQHLL CRPPRGFEEF VKEHFRRRGR FVLRTCNAWL QENVVDDADT TEATRKHPCS TGLRLALTNV APSLVAAFAK LGVEGCEEFH
001: MVEIKDSSNV RKLKEEFLRD FKRFDTVEDF SDHHYAAEGS PAKLSLWHLK FKGRPKNWVK DIQKEWKILD KNLPETIFVR ACESRIDLLR AVIIGAEGTP
101: YHDGLFFFDI QFPDTYPSVP PKVHYHSGGL RINPNLYKCG KVCLSLISTW TGKKREKWLP KESTMLQLLV SIQALILNEK PYYNEPGYEK SMGTPLGESY
201: SKDYSENVFV FSLKTMHFEE FVRSHFFVRS HDIVKACNAY KDGAPVGSID KGGVKKQTRQ RGSLKFRINV TSFMKTVVDE FVNLGAIREA NHRGEPNPTL
301: FSCFFFCYLE LIICSV
101: YHDGLFFFDI QFPDTYPSVP PKVHYHSGGL RINPNLYKCG KVCLSLISTW TGKKREKWLP KESTMLQLLV SIQALILNEK PYYNEPGYEK SMGTPLGESY
201: SKDYSENVFV FSLKTMHFEE FVRSHFFVRS HDIVKACNAY KDGAPVGSID KGGVKKQTRQ RGSLKFRINV TSFMKTVVDE FVNLGAIREA NHRGEPNPTL
301: FSCFFFCYLE LIICSV
Arabidopsis Description
UBC39Putative ubiquitin-conjugating enzyme E2 39 [Source:UniProtKB/Swiss-Prot;Acc:F4HPP7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.