Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G015200.1 | Wheat | cytosol | 94.88 | 94.6 |
| TraesCS3A01G030200.1 | Wheat | endoplasmic reticulum | 18.05 | 83.72 |
| TraesCS2A01G441700.1 | Wheat | cytosol | 20.46 | 81.93 |
| TraesCS3A01G030400.1 | Wheat | plasma membrane | 81.04 | 81.04 |
| Os05t0153132-00 | Rice | cytosol | 15.05 | 57.25 |
| TraesCS2A01G403400.1 | Wheat | cytosol | 53.96 | 54.29 |
| TraesCS2A01G586300.1 | Wheat | nucleus | 48.75 | 49.95 |
| OQU79703 | Sorghum | cytosol | 36.41 | 42.06 |
| TraesCS3A01G157200.1 | Wheat | mitochondrion, nucleus, plastid | 13.64 | 36.36 |
| OQU84284 | Sorghum | mitochondrion, nucleus, plasma membrane, plastid | 30.59 | 35.97 |
| TraesCS3A01G157300.2 | Wheat | nucleus | 13.14 | 35.69 |
| TraesCS3A01G047700.3 | Wheat | nucleus | 36.51 | 32.7 |
| TraesCS1A01G388400.1 | Wheat | cytosol | 26.38 | 31.2 |
| TraesCS3A01G156300.1 | Wheat | nucleus, plastid | 14.14 | 31.06 |
| TraesCS3A01G269200.1 | Wheat | nucleus | 16.05 | 30.19 |
| TraesCS1A01G129500.2 | Wheat | nucleus | 14.84 | 30.02 |
| TraesCS1A01G388000.1 | Wheat | cytosol, mitochondrion, nucleus | 16.25 | 28.88 |
| KRH36075 | Soybean | nucleus | 13.14 | 24.81 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G031600.1 | EnsemblPlantsGene:TraesCS3A01G031600 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | ncoils:Coil | PANTHER:PTHR44422 | PANTHER:PTHR44422:SF3 | PFAM:PF00179 | PFscan:PS50127 |
| SEG:seg | SMART:SM00212 | SUPFAM:SSF54495 | TIGR:cd00195 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr3A:-:17375773..17380038
Molecular Weight (calculated)
111256.0 Da
IEP (calculated)
4.717
GRAVY (calculated)
-0.343
Length
997 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVVPAAPSP NIYRLDLVSF GRMVLDRGLV LPEAKVGNVY LPVDKFKLLR IDDCIVRKSV SDIKVMDRSH LYPGQVVASA SDMEGQLGVV TGVNTLLNLA
101: KLDNNGMATK IIKGVSPSSL RRVRSLNLGD FVVSGPWLGR VVEVYIDIDV LFQDGAVCRV TDAEAVSKNL ERVPDSYTMV RMHRHQMNSR FHQGQHVTGS
201: DSCSVFKAAR WLNGYWHPQR EIGTIMKVET SGVLVYWVAS MHCGTDMELV EASAPPAYQN PDDLTFFCAS YNCCWGLADR CFFLETSSTE GDATSAPDQH
301: NNDDDNKEEE EEEEEEQYSA CSQDNQDECE ASTSQVVPPT KQNDVRFYWK QLRKVRFEGH RWGKHLQAMR HVEVEFPMVV ANTCTTVDVL WQDGTRHHGR
401: PSATLVPFGI VNEQEFFPGQ HVVANALPIN ASVDATGDPN DMTTTGVNND NVAPGTRPME RVGIVKSLQY EDQTVCVSWF KTTRHPDEVK EVECDDTVSA
501: YDLKIDSSHS VYYGDIVIRL LPSGSTNNGE STPLLQGKKK ENGVDADLSW VGRVVELPNG HVQVKWGDGS MSTVLPHEIT VVKDKHYMEL WLEMGDWVED
601: DGTDDAPEET AAANTEINLQ NLNNDVDDVN LAMSRTSLLG FSFQSFLQLT SDVVARGKGY LMNWWPWSSS LPSSELPAHT NDDSIGGAAM ETSDAAVDVT
701: SHGFAKGMKD ADATCFCDEP FCFPCFDVLQ ISPLDHHYLD TTDKEMQGAS RGKSWAKTVQ KEWKILENGL PETIYVRVFE DRMDLLRVVM VGASGTPYHH
801: GLFFFDLQLP PSYPDAPPQV YYHSFGLRLN PNLYECGTVC LSLLNTFGGE DTEVWSPTTS SLLQVVVSIQ GLVLNDQPYY NEAGYETLVG RPEGHRNALP
901: YNENAYLLTL RTMQHLLCRP PRGFEEFVKE HFRRRGRFVL RTCNAWLQEN VVDDAHATEA TRKHPCSTGL RLALTNVAPS LVAAFAKLGV EGCEEFQ
101: KLDNNGMATK IIKGVSPSSL RRVRSLNLGD FVVSGPWLGR VVEVYIDIDV LFQDGAVCRV TDAEAVSKNL ERVPDSYTMV RMHRHQMNSR FHQGQHVTGS
201: DSCSVFKAAR WLNGYWHPQR EIGTIMKVET SGVLVYWVAS MHCGTDMELV EASAPPAYQN PDDLTFFCAS YNCCWGLADR CFFLETSSTE GDATSAPDQH
301: NNDDDNKEEE EEEEEEQYSA CSQDNQDECE ASTSQVVPPT KQNDVRFYWK QLRKVRFEGH RWGKHLQAMR HVEVEFPMVV ANTCTTVDVL WQDGTRHHGR
401: PSATLVPFGI VNEQEFFPGQ HVVANALPIN ASVDATGDPN DMTTTGVNND NVAPGTRPME RVGIVKSLQY EDQTVCVSWF KTTRHPDEVK EVECDDTVSA
501: YDLKIDSSHS VYYGDIVIRL LPSGSTNNGE STPLLQGKKK ENGVDADLSW VGRVVELPNG HVQVKWGDGS MSTVLPHEIT VVKDKHYMEL WLEMGDWVED
601: DGTDDAPEET AAANTEINLQ NLNNDVDDVN LAMSRTSLLG FSFQSFLQLT SDVVARGKGY LMNWWPWSSS LPSSELPAHT NDDSIGGAAM ETSDAAVDVT
701: SHGFAKGMKD ADATCFCDEP FCFPCFDVLQ ISPLDHHYLD TTDKEMQGAS RGKSWAKTVQ KEWKILENGL PETIYVRVFE DRMDLLRVVM VGASGTPYHH
801: GLFFFDLQLP PSYPDAPPQV YYHSFGLRLN PNLYECGTVC LSLLNTFGGE DTEVWSPTTS SLLQVVVSIQ GLVLNDQPYY NEAGYETLVG RPEGHRNALP
901: YNENAYLLTL RTMQHLLCRP PRGFEEFVKE HFRRRGRFVL RTCNAWLQEN VVDDAHATEA TRKHPCSTGL RLALTNVAPS LVAAFAKLGV EGCEEFQ
001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
Arabidopsis Description
Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.