Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G029300.1 | Wheat | peroxisome | 19.56 | 90.7 |
| TraesCS3A01G030200.1 | Wheat | endoplasmic reticulum | 18.66 | 86.51 |
| TraesCS3D01G015300.1 | Wheat | plasma membrane | 85.96 | 85.19 |
| TraesCS2A01G441700.1 | Wheat | cytosol | 21.06 | 84.34 |
| TraesCS3A01G031600.1 | Wheat | cytosol | 81.04 | 81.04 |
| Os05t0153132-00 | Rice | cytosol | 15.65 | 59.54 |
| TraesCS2A01G403400.1 | Wheat | cytosol | 54.76 | 55.1 |
| TraesCS2A01G586300.1 | Wheat | nucleus | 49.35 | 50.57 |
| OQU79703 | Sorghum | cytosol | 36.51 | 42.18 |
| TraesCS3A01G157200.1 | Wheat | mitochondrion, nucleus, plastid | 13.74 | 36.63 |
| OQU84284 | Sorghum | mitochondrion, nucleus, plasma membrane, plastid | 30.79 | 36.2 |
| TraesCS3A01G157300.2 | Wheat | nucleus | 13.24 | 35.97 |
| TraesCS3A01G047700.3 | Wheat | nucleus | 36.91 | 33.06 |
| TraesCS3A01G156300.1 | Wheat | nucleus, plastid | 14.54 | 31.94 |
| TraesCS1A01G388400.1 | Wheat | cytosol | 26.18 | 30.96 |
| TraesCS1A01G129500.2 | Wheat | nucleus | 15.05 | 30.43 |
| TraesCS3A01G269200.1 | Wheat | nucleus | 15.95 | 30.0 |
| TraesCS1A01G388000.1 | Wheat | cytosol, mitochondrion, nucleus | 15.95 | 28.34 |
| KRH36075 | Soybean | nucleus | 13.04 | 24.62 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G030400.1 | EnsemblPlantsGene:TraesCS3A01G030400 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44422 | PANTHER:PTHR44422:SF3 | PFAM:PF00179 | PFscan:PS50127 | SEG:seg |
| SMART:SM00212 | SUPFAM:SSF54495 | TIGR:cd00195 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr3A:+:16008968..16012791
Molecular Weight (calculated)
110348.0 Da
IEP (calculated)
4.753
GRAVY (calculated)
-0.286
Length
997 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVPAAASPN LYLLDLVKSG RMLIDRGLVL ADGEVDNIYL PVDTFKLLRI DDTVVYKNVG DIKVVDRSHL YPGQVVGSAS DMGGQIGVVT GVNTVLNLAK
101: LDNNGVPTKV IRGVSPSSLR RVRSLNLGDF VVSGPWLGRV VEVSIDVDVL FDDGAICRIT DAESTNLARV REIGTMATLH RHQMNSQFHQ GQHVTLTRAC
201: SLFKDARWLN GYWHPYRQVG TIMKVETSGV LVYWVASRHC GTDKGLVEAS APPAYQNPDD LTFFCASYNC CWGLADRCFF LETSSTKEDA ACAPDQHGDD
301: DDDEVVEEDE DEEEEEEYNA CSQDNQEVCE ASTSHVGPPT KQKDERFYRK QLRKVVFEGH RRAQRPQVMR HVEVEFPMVV ADTCTTVDVL WQDGTRQHGR
401: RSATVVPFGI WNEQEFFPGQ HVVANILPIS AAVDSTGDHD DVITTSVNND IVASGTGPTE RVGIVKSLQY KDQTVCVSWF KTSGHPDEAR EVECDQTISA
501: YDLKLDSNHS AYYGDIVIRI LPSGSTNDAE SAPLLSGNKK KNAVPVDLSW VGRVVELPNG HIQVKWGDGS MSTVSPHEIV AVKDKHYMEL WLEMGDWVED
601: DGIDDAPEEP VAANMEIDLQ NLDNDVESVS PAMSRTSLLG FPFRSLLQFT SDVVARGKGY LMNWRPSSLS PSSELPAPAN DDSIGGAAAM GINDAAVDLT
701: CHGFAGGTKA AYATCCCDES SCFPHFNVLQ MSPLDHHYLD TTDQEMQGAS RGKSWAKTVQ KEWKILENDL PETIYVRAFE DRMDLLRVVM VGASGTPYHH
801: GLFFFDMQLP PSYPDAPPQV YYHSFGLRLN PNLYESGTVC LSLLNTFGGE GTEVWSSATS SLLQVVVSIQ GLVLNDQPYY NEAGYETLVG KPEGRRNALP
901: YNENAYLLTL RTMQHLLRRP PRGFEEFVKE HFRRRGKFVL RTCNVWLQGN VVDDAHAIEA TRKRPCSAGL RLALTNMMPS LVAAFTEIGA VGCEEFQ
101: LDNNGVPTKV IRGVSPSSLR RVRSLNLGDF VVSGPWLGRV VEVSIDVDVL FDDGAICRIT DAESTNLARV REIGTMATLH RHQMNSQFHQ GQHVTLTRAC
201: SLFKDARWLN GYWHPYRQVG TIMKVETSGV LVYWVASRHC GTDKGLVEAS APPAYQNPDD LTFFCASYNC CWGLADRCFF LETSSTKEDA ACAPDQHGDD
301: DDDEVVEEDE DEEEEEEYNA CSQDNQEVCE ASTSHVGPPT KQKDERFYRK QLRKVVFEGH RRAQRPQVMR HVEVEFPMVV ADTCTTVDVL WQDGTRQHGR
401: RSATVVPFGI WNEQEFFPGQ HVVANILPIS AAVDSTGDHD DVITTSVNND IVASGTGPTE RVGIVKSLQY KDQTVCVSWF KTSGHPDEAR EVECDQTISA
501: YDLKLDSNHS AYYGDIVIRI LPSGSTNDAE SAPLLSGNKK KNAVPVDLSW VGRVVELPNG HIQVKWGDGS MSTVSPHEIV AVKDKHYMEL WLEMGDWVED
601: DGIDDAPEEP VAANMEIDLQ NLDNDVESVS PAMSRTSLLG FPFRSLLQFT SDVVARGKGY LMNWRPSSLS PSSELPAPAN DDSIGGAAAM GINDAAVDLT
701: CHGFAGGTKA AYATCCCDES SCFPHFNVLQ MSPLDHHYLD TTDQEMQGAS RGKSWAKTVQ KEWKILENDL PETIYVRAFE DRMDLLRVVM VGASGTPYHH
801: GLFFFDMQLP PSYPDAPPQV YYHSFGLRLN PNLYESGTVC LSLLNTFGGE GTEVWSSATS SLLQVVVSIQ GLVLNDQPYY NEAGYETLVG KPEGRRNALP
901: YNENAYLLTL RTMQHLLRRP PRGFEEFVKE HFRRRGKFVL RTCNVWLQGN VVDDAHAIEA TRKRPCSAGL RLALTNMMPS LVAAFTEIGA VGCEEFQ
001: MVEIKDSSNV RKLKEEFLRD FKRFDTVEDF SDHHYAAEGS PAKLSLWHLK FKGRPKNWVK DIQKEWKILD KNLPETIFVR ACESRIDLLR AVIIGAEGTP
101: YHDGLFFFDI QFPDTYPSVP PKVHYHSGGL RINPNLYKCG KVCLSLISTW TGKKREKWLP KESTMLQLLV SIQALILNEK PYYNEPGYEK SMGTPLGESY
201: SKDYSENVFV FSLKTMHFEE FVRSHFFVRS HDIVKACNAY KDGAPVGSID KGGVKKQTRQ RGSLKFRINV TSFMKTVVDE FVNLGAIREA NHRGEPNPTL
301: FSCFFFCYLE LIICSV
101: YHDGLFFFDI QFPDTYPSVP PKVHYHSGGL RINPNLYKCG KVCLSLISTW TGKKREKWLP KESTMLQLLV SIQALILNEK PYYNEPGYEK SMGTPLGESY
201: SKDYSENVFV FSLKTMHFEE FVRSHFFVRS HDIVKACNAY KDGAPVGSID KGGVKKQTRQ RGSLKFRINV TSFMKTVVDE FVNLGAIREA NHRGEPNPTL
301: FSCFFFCYLE LIICSV
Arabidopsis Description
UBC39Putative ubiquitin-conjugating enzyme E2 39 [Source:UniProtKB/Swiss-Prot;Acc:F4HPP7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.