Factsheet for TraesCS2A01G441700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G030200.1	Wheat	endoplasmic reticulum	69.08	80.0
Os05t0153132-00	Rice	cytosol	59.84	56.87
TraesCS3A01G157200.1	Wheat	mitochondrion, nucleus, plastid	46.99	31.28
TraesCS3A01G157300.2	Wheat	nucleus	45.38	30.79
TraesCS1A01G129500.2	Wheat	nucleus	49.0	24.75
TraesCS3A01G156300.1	Wheat	nucleus, plastid	44.58	24.45
TraesCS3A01G269200.1	Wheat	nucleus	48.59	22.83
TraesCS1A01G388000.1	Wheat	cytosol, mitochondrion, nucleus	49.4	21.93
TraesCS2B01G461900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane, plastid	90.76	21.81
TraesCS3A01G030400.1	Wheat	plasma membrane	84.34	21.06
TraesCS3A01G031600.1	Wheat	cytosol	81.93	20.46
TraesCS2A01G403400.1	Wheat	cytosol	75.9	19.07
OQU79703	Sorghum	cytosol	63.45	18.31
TraesCS2A01G586300.1	Wheat	nucleus	71.08	18.19
TraesCS1A01G388400.1	Wheat	cytosol	49.4	14.59
OQU84284	Sorghum	mitochondrion, nucleus, plasma membrane, plastid	48.19	14.15
TraesCS3A01G047700.3	Wheat	nucleus	57.83	12.94
KRH36075	Soybean	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS2A01G441700.1	EnsemblPlantsGene:TraesCS2A01G441700	Gene3D:3.10.110.10	InterPro:IPR000608	InterPro:IPR016135	InterPro:UBQ-conjugat_E2
InterPro:UBQ-conjugating_enzyme/RWD	PANTHER:PTHR44422	PFAM:PF00179	PFscan:PS50127	SEG:seg	SMART:SM00212
SUPFAM:SSF54495	TIGR:cd00195	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr2A:+:691533117..691533934

Molecular Weight (calculated)

27849.4 Da

IEP (calculated)

6.774

GRAVY (calculated)

-0.173

Length

249 amino acids

Sequence
(BLAST)

001: MQGGRRGKNW AKTVQKEWKI LENDLPETIY VQAFEDRMDL LRLVMVGASG TPYNHGLFFF DLQLPPSYPV APPQVYYHSF GLRLNPNLYE SGTVCLSLLG
101: TFDGEGTELW SPATSSLLQV VVSIQGLVLN AQPYYNEAGY EALVGKREGH RNALPYSENA YLLTLRTMLH LMRRPPQGFE KFVNEHFRCR GRFVLRTCNT
201: WLQGCVVGDA HATESSREQP CSAGLRLALA NVVPSLIAAF TEISAEGCD

Best Arabidopsis Sequence Match ( AT1G53025.1 )
(BLAST)

001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR

Arabidopsis Description

Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.