Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G400600.1 | Wheat | nucleus | 92.94 | 92.1 |
| TraesCS2B01G421500.1 | Wheat | golgi, mitochondrion, plasma membrane | 83.96 | 85.42 |
| TraesCS2A01G441700.1 | Wheat | cytosol | 19.07 | 75.9 |
| TraesCS3A01G030200.1 | Wheat | endoplasmic reticulum | 15.84 | 73.02 |
| Os05t0153132-00 | Rice | cytosol | 15.44 | 58.4 |
| TraesCS3A01G030400.1 | Wheat | plasma membrane | 55.1 | 54.76 |
| TraesCS3A01G031600.1 | Wheat | cytosol | 54.29 | 53.96 |
| TraesCS2A01G586300.1 | Wheat | nucleus | 50.25 | 51.18 |
| OQU79703 | Sorghum | cytosol | 36.13 | 41.48 |
| OQU84284 | Sorghum | mitochondrion, nucleus, plasma membrane, plastid | 33.6 | 39.27 |
| TraesCS3A01G157200.1 | Wheat | mitochondrion, nucleus, plastid | 13.93 | 36.9 |
| TraesCS3A01G157300.2 | Wheat | nucleus | 13.12 | 35.42 |
| TraesCS3A01G047700.3 | Wheat | nucleus | 39.56 | 35.22 |
| TraesCS1A01G388400.1 | Wheat | cytosol | 26.94 | 31.67 |
| TraesCS3A01G269200.1 | Wheat | nucleus | 16.55 | 30.94 |
| TraesCS1A01G129500.2 | Wheat | nucleus | 15.34 | 30.83 |
| TraesCS3A01G156300.1 | Wheat | nucleus, plastid | 14.03 | 30.62 |
| TraesCS1A01G388000.1 | Wheat | cytosol, mitochondrion, nucleus | 16.95 | 29.95 |
| KRH36075 | Soybean | nucleus | 13.72 | 25.76 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G403400.1 | EnsemblPlantsGene:TraesCS2A01G403400 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44422 | PANTHER:PTHR44422:SF3 | PFAM:PF00179 | PFscan:PS50127 | SEG:seg |
| SMART:SM00212 | SUPFAM:SSF54495 | TIGR:cd00195 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2A:+:658906350..658910433
Molecular Weight (calculated)
108649.0 Da
IEP (calculated)
4.593
GRAVY (calculated)
-0.338
Length
991 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVVAEPSKI YLLDLVSFGY ESDGVGSRGL VVPDTWVHND SLPVGTVTIL CVDGSVVTRK AYDVNVVDRS YFHPGEVVGS ASDLGGQIGV VTNVTVAVDL
101: IERTVRGGEP AKIVKGVPPS RLRRVKGLSL GDYVVSGPWF GRVVEVSTDV YVLFDDGAMC KVPDAESKML RSVAKADVLY RPEMNSPFYP GQRVTGDPCA
201: VFKPSRWLNG HWRPERRAGT VTKLEMSGVL VYWIASAHGG TDQQLVQELA PSAYQSPGNL TFFCSASECT WGVADTCFLR KTTDDSLPAA AETNKGAHDG
301: NHQEDQPVAC SDDEYEYDSD TTEEGERESP STATVLTKQQ QEMRFYRKQL RKDYFDGHRR ARCRDVGRYV ELDQLPMSVA STRTTVDVLW QDGTRQLGAP
401: STSLVPFNIL NEQEFLPGQF IVDNAFPAAN APAGAAIGVT GDDDGAAASA TRRVGFVRSL DCKDQMVHVS WFKAASRPGQ AREIDCNDTV SAYSLEREPE
501: RYAYYGDVVV RLLPSGSTDG PSAPPSQGNH EKKHDLSWVG RVVDLPDGFV QVKWGDGSTS TVLPHEICVI NEQKYDELEA AMGEWVEDDG IDPTQEPSTD
601: YTENVPQNPT GVDGDEDPAG RDGPAAITTG RLGSVVWFVI GWTSNVLARG KRCLADWSWS PLSGSELFAA AENVGAPETV PGGGDHPRDG AAREVNDADD
701: SASEGKEAED ANGNEEPFRF LHFDVRDCPL DHHYLDTADQ GVCHGKRWVK IVQREWKILE NNLPDTIYVR AFENRIDLLR AVMVGASGTP YHDGLFFFDF
801: LLPPSYPDAP PQVYYHSYGL RLNPNLYASG TVCLSLLNTF GGEGTEIWSP ATSSLLQVLV SIQGLVLNNQ PYYNEAGYEA LVGTPEGCRN ALQYNENAYL
901: LTLRTMLHLL RRPPLGFEEF VRDHFRRRGT FILRDCEACL QGCDVGTLCS EACATKRSSE RQCSPGLRFT LANLVPRLVA AFTEIGVEGC V
101: IERTVRGGEP AKIVKGVPPS RLRRVKGLSL GDYVVSGPWF GRVVEVSTDV YVLFDDGAMC KVPDAESKML RSVAKADVLY RPEMNSPFYP GQRVTGDPCA
201: VFKPSRWLNG HWRPERRAGT VTKLEMSGVL VYWIASAHGG TDQQLVQELA PSAYQSPGNL TFFCSASECT WGVADTCFLR KTTDDSLPAA AETNKGAHDG
301: NHQEDQPVAC SDDEYEYDSD TTEEGERESP STATVLTKQQ QEMRFYRKQL RKDYFDGHRR ARCRDVGRYV ELDQLPMSVA STRTTVDVLW QDGTRQLGAP
401: STSLVPFNIL NEQEFLPGQF IVDNAFPAAN APAGAAIGVT GDDDGAAASA TRRVGFVRSL DCKDQMVHVS WFKAASRPGQ AREIDCNDTV SAYSLEREPE
501: RYAYYGDVVV RLLPSGSTDG PSAPPSQGNH EKKHDLSWVG RVVDLPDGFV QVKWGDGSTS TVLPHEICVI NEQKYDELEA AMGEWVEDDG IDPTQEPSTD
601: YTENVPQNPT GVDGDEDPAG RDGPAAITTG RLGSVVWFVI GWTSNVLARG KRCLADWSWS PLSGSELFAA AENVGAPETV PGGGDHPRDG AAREVNDADD
701: SASEGKEAED ANGNEEPFRF LHFDVRDCPL DHHYLDTADQ GVCHGKRWVK IVQREWKILE NNLPDTIYVR AFENRIDLLR AVMVGASGTP YHDGLFFFDF
801: LLPPSYPDAP PQVYYHSYGL RLNPNLYASG TVCLSLLNTF GGEGTEIWSP ATSSLLQVLV SIQGLVLNNQ PYYNEAGYEA LVGTPEGCRN ALQYNENAYL
901: LTLRTMLHLL RRPPLGFEEF VRDHFRRRGT FILRDCEACL QGCDVGTLCS EACATKRSSE RQCSPGLRFT LANLVPRLVA AFTEIGVEGC V
001: MEMSLTDSDW DSSSDSGSSE HEEVEFSYGG RAQNIFSNLE ETIGKIDEFL SFERGFMYGD IVRSATEPSG QSGRVINIDM FVNLESTHGK IMKEVDTKRL
101: QKLRSISLSD YVINGPWVGR VDKIVERVSV TLDDGTNYEV LVDGQDKLVA IPPNLLEDSQ YSYYPGQRVQ VKLAHAPRST TWLCGTWRGT QVMGTVCTVE
201: AGLVYVDWVA SIVMEGDRNL TAPQALQNPE SLTLLPCVSH ASWQLGDWCI LPGSSHCDIA ERQTPNVAAY NLNECHKTFQ KGFNRNMQNS GLDELFVITK
301: TKMKVAVMWQ DGSCSLGVDS QQLLPVGAVN AHDFWPEQFV VEKETCNSKK WGVVKAVNAK EQTVKVQWTI QVEKEATGCV DEVMEEIVSA YELLEHPDFG
401: FCFSDVVVKL LPEGKFDPNA DTIVATEAKH LLTESDYSGA YFLSSIGVVT GFKNGSVKVK WANGSTSKVA PCEIWKMERS EYSNSSTVSS EGSVQDLSQK
501: ISQSDEASSN HQETGLVKLY SVGESCNENI PECSSFFLPK AAIGFITNLA SSLFGYQGST SVISSHSRCN DSEDQSDSEV LVQETAESYD NSETNSGEVD
601: MTTTMVNIPI EGKGINKTLD STLLENSRNQ VRFRQFDMVN DCSDHHFLSS DKGLAQSQVT KSWVKKVQQE WSNLEANLPN TIYVRVCEER MDLLRAALVG
701: APGTPYHDGL FFFDIMLPPQ YPHEPPMVHY HSGGMRLNPN LYESGRVCLS LLNTWSGSGT EVWNAGSSSI LQLLLSFQAL VLNEKPYFNE AGYDKQLGRA
801: EGEKNSVSYN ENAFLITCKS MISMLRKPPK HFEMLVKDHF THRAQHVLAA CKAYMEGVPV GSSANLQGNS TTNSTGFKIM LSKLYPKLLE AFSEIGVDCV
901: QEIGPES
101: QKLRSISLSD YVINGPWVGR VDKIVERVSV TLDDGTNYEV LVDGQDKLVA IPPNLLEDSQ YSYYPGQRVQ VKLAHAPRST TWLCGTWRGT QVMGTVCTVE
201: AGLVYVDWVA SIVMEGDRNL TAPQALQNPE SLTLLPCVSH ASWQLGDWCI LPGSSHCDIA ERQTPNVAAY NLNECHKTFQ KGFNRNMQNS GLDELFVITK
301: TKMKVAVMWQ DGSCSLGVDS QQLLPVGAVN AHDFWPEQFV VEKETCNSKK WGVVKAVNAK EQTVKVQWTI QVEKEATGCV DEVMEEIVSA YELLEHPDFG
401: FCFSDVVVKL LPEGKFDPNA DTIVATEAKH LLTESDYSGA YFLSSIGVVT GFKNGSVKVK WANGSTSKVA PCEIWKMERS EYSNSSTVSS EGSVQDLSQK
501: ISQSDEASSN HQETGLVKLY SVGESCNENI PECSSFFLPK AAIGFITNLA SSLFGYQGST SVISSHSRCN DSEDQSDSEV LVQETAESYD NSETNSGEVD
601: MTTTMVNIPI EGKGINKTLD STLLENSRNQ VRFRQFDMVN DCSDHHFLSS DKGLAQSQVT KSWVKKVQQE WSNLEANLPN TIYVRVCEER MDLLRAALVG
701: APGTPYHDGL FFFDIMLPPQ YPHEPPMVHY HSGGMRLNPN LYESGRVCLS LLNTWSGSGT EVWNAGSSSI LQLLLSFQAL VLNEKPYFNE AGYDKQLGRA
801: EGEKNSVSYN ENAFLITCKS MISMLRKPPK HFEMLVKDHF THRAQHVLAA CKAYMEGVPV GSSANLQGNS TTNSTGFKIM LSKLYPKLLE AFSEIGVDCV
901: QEIGPES
Arabidopsis Description
UBC24Probable ubiquitin-conjugating enzyme E2 24 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY10]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.