Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G403400.1 | Wheat | cytosol | 92.1 | 92.94 |
| TraesCS2B01G421500.1 | Wheat | golgi, mitochondrion, plasma membrane | 84.1 | 86.34 |
| TraesCS7D01G206600.1 | Wheat | cytosol | 18.1 | 77.68 |
| TraesCS4D01G289700.1 | Wheat | cytosol | 15.9 | 69.43 |
| Os05t0153132-00 | Rice | cytosol | 15.5 | 59.16 |
| TraesCS3D01G015200.1 | Wheat | cytosol | 55.2 | 55.2 |
| TraesCS3D01G015300.1 | Wheat | plasma membrane | 55.2 | 54.87 |
| TraesCS2D01G600300.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 51.4 | 52.83 |
| TraesCS2D01G051900.1 | Wheat | cytosol | 51.4 | 52.4 |
| OQU79703 | Sorghum | cytosol | 36.4 | 42.18 |
| TraesCS5D01G272300.1 | Wheat | cytosol, nucleus, plastid | 13.6 | 39.77 |
| OQU84284 | Sorghum | mitochondrion, nucleus, plasma membrane, plastid | 33.5 | 39.5 |
| TraesCS3D01G164800.2 | Wheat | mitochondrion, nucleus, plastid | 13.9 | 36.77 |
| TraesCS3D01G164900.3 | Wheat | nucleus | 13.1 | 35.6 |
| TraesCS3D01G032000.4 | Wheat | nucleus | 39.5 | 35.49 |
| TraesCS5D01G272400.1 | Wheat | nucleus | 14.7 | 32.45 |
| TraesCS3D01G164200.1 | Wheat | nucleus, plastid | 14.3 | 31.71 |
| TraesCS1D01G396300.1 | Wheat | nucleus | 26.8 | 31.38 |
| TraesCS3D01G269000.1 | Wheat | nucleus | 16.4 | 30.94 |
| TraesCS1D01G396000.2 | Wheat | cytosol, mitochondrion, nucleus | 16.9 | 30.23 |
| TraesCS1D01G125200.2 | Wheat | plastid | 15.1 | 28.98 |
| KRH36075 | Soybean | nucleus | 13.4 | 25.38 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G400600.1 | EnsemblPlantsGene:TraesCS2D01G400600 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44422 | PANTHER:PTHR44422:SF3 | PFAM:PF00179 | PFscan:PS50127 | SEG:seg |
| SMART:SM00212 | SUPFAM:SSF54495 | TIGR:cd00195 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2D:+:514945779..514949809
Molecular Weight (calculated)
108960.0 Da
IEP (calculated)
4.545
GRAVY (calculated)
-0.346
Length
1000 amino acids
Sequence
(BLAST)
(BLAST)
001: MNVVAEPSKI YLLDLVSFGH ESDGAGSRGL VVPDTWVHND SLPVGTVAIL CVDGSVVTRK ACDVNVVDRS YFYPGEVVGS ASDLGGQIGV VTNVTVAVDL
101: IERTVRGGEP AKIVKGVPPS RLRRVKGLSL GDYVVSGPWL GRVVEVSTDV YVLFDDGAMC KVPDAESKML RSVAKADALY RPEMNSPFYP GHRVTGDPCA
201: VFKPSRWLNG HWRPERRAGT VTKLEMSGVL VHWIASAHGG TDQQLVQEFA PPAYQNPGNL TFFCSASDCT WGVADTCFLR KTSDDSLPAA AETNKGAGDV
301: ACAHDGNHQE DRPVACSDDE YEYDSDTTEE DERESPSTTT VPTKQQQEMR FYRKQLRKDY FDGHRRARCR DVGRYVELDQ LPMSVASTHT TVDVLWQDGT
401: RQLGAPSTSL VSFNILNEQE FLPGQFVFDN AFPAATAPVD AAVGVTGDDD GSAATRRVGF VRSLDCKDQM VHVSWFKAAS RPGQAREIDC SDTVSAYSLE
501: REPERYAYYG DVVVRLLPSG STDGPSAPPS QGNHKNKADL SWVGRVVDLP DGFVQVKWGD GSTSTIMPSS VLPSEICVIN EQNYDELEAE MGDWVEDDGI
601: DPPQEPATDY TENVPQNPTG VDGDEDPAGR DGPAAIATAR LGSAVSFVIG WASNVLARGK RCLSDWSSPS SSGSELSAAA ENEGAPETVP GGGDHPRDDA
701: AREVIDADDP ASEGKEAADA NGNEEPFRFL HFDVRDSPPD HHYLDTADQG GCGGKRWVKI VQREWKILEN NLPDTIYVRA FENRIDLLRA VMVGASGTPY
801: HDGLFFFDLL LPPSYPDAPP QVYYHSFGLR LNPNLYASGT VCLSLLNTFG GEGTEIWSPA TSSLLQVLVS IQGLVLNNQP YYNEAEYEAL VGTPEGCRNA
901: LPYNENAYLL TLRTMLHLLR RPPLGFEEFV RDHFRRRARF ILRACEAYLQ GCDVGTLCSE ACATKRSSER QCSPGLRFTL ANLVPRLVAA FAEIGAEGCV
101: IERTVRGGEP AKIVKGVPPS RLRRVKGLSL GDYVVSGPWL GRVVEVSTDV YVLFDDGAMC KVPDAESKML RSVAKADALY RPEMNSPFYP GHRVTGDPCA
201: VFKPSRWLNG HWRPERRAGT VTKLEMSGVL VHWIASAHGG TDQQLVQEFA PPAYQNPGNL TFFCSASDCT WGVADTCFLR KTSDDSLPAA AETNKGAGDV
301: ACAHDGNHQE DRPVACSDDE YEYDSDTTEE DERESPSTTT VPTKQQQEMR FYRKQLRKDY FDGHRRARCR DVGRYVELDQ LPMSVASTHT TVDVLWQDGT
401: RQLGAPSTSL VSFNILNEQE FLPGQFVFDN AFPAATAPVD AAVGVTGDDD GSAATRRVGF VRSLDCKDQM VHVSWFKAAS RPGQAREIDC SDTVSAYSLE
501: REPERYAYYG DVVVRLLPSG STDGPSAPPS QGNHKNKADL SWVGRVVDLP DGFVQVKWGD GSTSTIMPSS VLPSEICVIN EQNYDELEAE MGDWVEDDGI
601: DPPQEPATDY TENVPQNPTG VDGDEDPAGR DGPAAIATAR LGSAVSFVIG WASNVLARGK RCLSDWSSPS SSGSELSAAA ENEGAPETVP GGGDHPRDDA
701: AREVIDADDP ASEGKEAADA NGNEEPFRFL HFDVRDSPPD HHYLDTADQG GCGGKRWVKI VQREWKILEN NLPDTIYVRA FENRIDLLRA VMVGASGTPY
801: HDGLFFFDLL LPPSYPDAPP QVYYHSFGLR LNPNLYASGT VCLSLLNTFG GEGTEIWSPA TSSLLQVLVS IQGLVLNNQP YYNEAEYEAL VGTPEGCRNA
901: LPYNENAYLL TLRTMLHLLR RPPLGFEEFV RDHFRRRARF ILRACEAYLQ GCDVGTLCSE ACATKRSSER QCSPGLRFTL ANLVPRLVAA FAEIGAEGCV
001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
Arabidopsis Description
Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.