Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- golgi 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G400600.1 | Wheat | nucleus | 86.34 | 84.1 |
| TraesCS2A01G403400.1 | Wheat | cytosol | 85.42 | 83.96 |
| TraesCS7B01G110500.1 | Wheat | cytosol, plastid, vacuole | 18.48 | 77.25 |
| TraesCS3B01G029300.1 | Wheat | peroxisome | 15.81 | 71.63 |
| Os05t0153132-00 | Rice | cytosol | 15.71 | 58.4 |
| TraesCS3B01G029100.1 | Wheat | cytosol, nucleus, plasma membrane | 52.98 | 51.96 |
| TraesCS5B01G359000.1 | Wheat | cytosol | 47.02 | 51.29 |
| TraesCS3B01G029000.1 | Wheat | cytosol, nucleus, plasma membrane | 51.85 | 51.01 |
| TraesCS2B01G596800.1 | Wheat | cytosol | 47.23 | 49.3 |
| TraesCS2B01G461900.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane, plastid | 50.41 | 47.39 |
| TraesCS2B01G590500.1 | Wheat | cytosol | 25.77 | 40.95 |
| OQU79703 | Sorghum | cytosol | 35.52 | 40.09 |
| TraesCS2B01G590700.1 | Wheat | cytosol | 25.87 | 38.77 |
| OQU84284 | Sorghum | mitochondrion, nucleus, plasma membrane, plastid | 33.26 | 38.21 |
| TraesCS3B01G183600.1 | Wheat | mitochondrion, nucleus | 14.17 | 36.6 |
| TraesCS3B01G183800.2 | Wheat | nucleus | 13.35 | 35.33 |
| TraesCS3B01G034500.5 | Wheat | nucleus | 37.99 | 33.21 |
| TraesCS5B01G264000.1 | Wheat | nucleus | 14.78 | 31.79 |
| TraesCS1B01G415800.1 | Wheat | cytosol | 26.9 | 31.04 |
| TraesCS3B01G303300.1 | Wheat | nucleus | 16.84 | 30.94 |
| TraesCS3B01G183000.1 | Wheat | nucleus, plastid | 14.17 | 30.53 |
| TraesCS1B01G415500.2 | Wheat | nucleus | 16.94 | 29.41 |
| TraesCS1B01G146400.2 | Wheat | plastid | 15.3 | 28.71 |
| KRH36075 | Soybean | nucleus | 12.73 | 23.48 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G421500.1 | EnsemblPlantsGene:TraesCS2B01G421500 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44422 | PANTHER:PTHR44422:SF3 | PFAM:PF00179 | PFscan:PS50127 | SEG:seg |
| SMART:SM00212 | SUPFAM:SSF54495 | TIGR:cd00195 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2B:+:606612139..606616418
Molecular Weight (calculated)
105618.0 Da
IEP (calculated)
5.190
GRAVY (calculated)
-0.207
Length
974 amino acids
Sequence
(BLAST)
(BLAST)
001: MQTWRLTFQG KRVCLVYEEF NSLVITSLPG ISSDVCSGRV VLCFLRVALT ICTGCLREPS TTDLVGNFVR RNSIQKRWTS WQNLRRSTYL LDLVSFGYES
101: DGVSSRGLVV PDTWVHNDSL PVGTVAILCV DGSVVTRKAC DVNVVDRSYF YPGEVVGSAS DLGGQIGVVT NVTVAVDLIE RTVRGGEPAK IVKGVPPSRL
201: RRVKGLSLGD YVVSGPWLGR VVEVSTDVYV LFDDGAMCKV PDAESKMLRS VAKADALYRP EMNSPFYPGQ RVTGDPCAVF KPSRWLNGHW RPERRAGTVT
301: KLEMSGALVH WIASAHGGTD QQLVQESAPP AYQNPGNLTF FGSASACTWG VADTCFLRKT SDDSLPAAGE TNKGAGDDYF DGHRRTRCRD VGRYVELDQL
401: PMSVASTRST VDVLWQDGTR QLGAPSTSLV PFNILNEQEF LPGQFVVDNA FPAANAPADA AIGVTGDDDG AGASATRRVG FVTSLDCKDQ MVHVSWFKAA
501: SRPGQAREID CDDTVSAYSL EREPEHYAYY GDVVVRLLPS GSTDGPSAPP SQGNHEKKAD LSWVGRVVDL PDGFVQVKWG DGSTSTENVP QNPIGVDGDQ
601: DPAGRDGPAA ITTGHLGSAV SFVIGWASNV LARGKRCLAD WSSPSSSGSE LSAAAENVGA PETVPGGGDH PRDGAAREVV DGDDSASEGK EAADANGNEE
701: SFHFLHFDVG DSPPDHHYLD TADQGDCRGK WVKIVQREWK ILENNLPDTI YVRAFENRID LLRAVMVGAS GTPYHDGLFF FDLLLPPSYL DAPPQVYYHS
801: FGLCLNPNLY ASRTVCLSLL NTFGGEGTEI WSPATSSLLQ VLVSIQGLVL NNQPYYNEAG YEALVGTPKG CRNALPYNEN AYLLTLRTML HLLRRPPLGF
901: EEFVRDHFRR RGRFILRACE AYLQGCDVGT LCSEACATKR SSERQCSPGL RFTLANLVPR LVAAFVEIGA EGCV
101: DGVSSRGLVV PDTWVHNDSL PVGTVAILCV DGSVVTRKAC DVNVVDRSYF YPGEVVGSAS DLGGQIGVVT NVTVAVDLIE RTVRGGEPAK IVKGVPPSRL
201: RRVKGLSLGD YVVSGPWLGR VVEVSTDVYV LFDDGAMCKV PDAESKMLRS VAKADALYRP EMNSPFYPGQ RVTGDPCAVF KPSRWLNGHW RPERRAGTVT
301: KLEMSGALVH WIASAHGGTD QQLVQESAPP AYQNPGNLTF FGSASACTWG VADTCFLRKT SDDSLPAAGE TNKGAGDDYF DGHRRTRCRD VGRYVELDQL
401: PMSVASTRST VDVLWQDGTR QLGAPSTSLV PFNILNEQEF LPGQFVVDNA FPAANAPADA AIGVTGDDDG AGASATRRVG FVTSLDCKDQ MVHVSWFKAA
501: SRPGQAREID CDDTVSAYSL EREPEHYAYY GDVVVRLLPS GSTDGPSAPP SQGNHEKKAD LSWVGRVVDL PDGFVQVKWG DGSTSTENVP QNPIGVDGDQ
601: DPAGRDGPAA ITTGHLGSAV SFVIGWASNV LARGKRCLAD WSSPSSSGSE LSAAAENVGA PETVPGGGDH PRDGAAREVV DGDDSASEGK EAADANGNEE
701: SFHFLHFDVG DSPPDHHYLD TADQGDCRGK WVKIVQREWK ILENNLPDTI YVRAFENRID LLRAVMVGAS GTPYHDGLFF FDLLLPPSYL DAPPQVYYHS
801: FGLCLNPNLY ASRTVCLSLL NTFGGEGTEI WSPATSSLLQ VLVSIQGLVL NNQPYYNEAG YEALVGTPKG CRNALPYNEN AYLLTLRTML HLLRRPPLGF
901: EEFVRDHFRR RGRFILRACE AYLQGCDVGT LCSEACATKR SSERQCSPGL RFTLANLVPR LVAAFVEIGA EGCV
001: MVEIKDSSNV RKLKEEFLRD FKRFDTVEDF SDHHYAAEGS PAKLSLWHLK FKGRPKNWVK DIQKEWKILD KNLPETIFVR ACESRIDLLR AVIIGAEGTP
101: YHDGLFFFDI QFPDTYPSVP PKVHYHSGGL RINPNLYKCG KVCLSLISTW TGKKREKWLP KESTMLQLLV SIQALILNEK PYYNEPGYEK SMGTPLGESY
201: SKDYSENVFV FSLKTMHFEE FVRSHFFVRS HDIVKACNAY KDGAPVGSID KGGVKKQTRQ RGSLKFRINV TSFMKTVVDE FVNLGAIREA NHRGEPNPTL
301: FSCFFFCYLE LIICSV
101: YHDGLFFFDI QFPDTYPSVP PKVHYHSGGL RINPNLYKCG KVCLSLISTW TGKKREKWLP KESTMLQLLV SIQALILNEK PYYNEPGYEK SMGTPLGESY
201: SKDYSENVFV FSLKTMHFEE FVRSHFFVRS HDIVKACNAY KDGAPVGSID KGGVKKQTRQ RGSLKFRINV TSFMKTVVDE FVNLGAIREA NHRGEPNPTL
301: FSCFFFCYLE LIICSV
Arabidopsis Description
UBC39Putative ubiquitin-conjugating enzyme E2 39 [Source:UniProtKB/Swiss-Prot;Acc:F4HPP7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.