Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G030200.1 | Wheat | endoplasmic reticulum | 20.91 | 96.28 |
| TraesCS3B01G029100.1 | Wheat | cytosol, nucleus, plasma membrane | 95.45 | 95.17 |
| TraesCS3B01G029300.1 | Wheat | peroxisome | 18.38 | 84.65 |
| TraesCS7B01G110500.1 | Wheat | cytosol, plastid, vacuole | 17.17 | 72.96 |
| TraesCS2B01G461900.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane, plastid | 64.85 | 61.97 |
| Os05t0153132-00 | Rice | cytosol | 15.25 | 57.63 |
| TraesCS2B01G421500.1 | Wheat | golgi, mitochondrion, plasma membrane | 51.01 | 51.85 |
| TraesCS5B01G359000.1 | Wheat | cytosol | 46.36 | 51.4 |
| TraesCS2B01G596800.1 | Wheat | cytosol | 47.37 | 50.27 |
| TraesCS2B01G590500.1 | Wheat | cytosol | 29.39 | 47.47 |
| TraesCS2B01G590700.1 | Wheat | cytosol | 29.7 | 45.23 |
| OQU79703 | Sorghum | cytosol | 35.76 | 41.02 |
| OQU84284 | Sorghum | mitochondrion, nucleus, plasma membrane, plastid | 31.52 | 36.79 |
| TraesCS3B01G183600.1 | Wheat | mitochondrion, nucleus | 13.94 | 36.6 |
| TraesCS3B01G183800.2 | Wheat | nucleus | 13.33 | 35.87 |
| TraesCS3B01G034500.5 | Wheat | nucleus | 35.96 | 31.96 |
| TraesCS3B01G183000.1 | Wheat | nucleus, plastid | 14.24 | 31.19 |
| TraesCS5B01G264000.1 | Wheat | nucleus | 14.14 | 30.91 |
| TraesCS3B01G303300.1 | Wheat | nucleus | 16.16 | 30.19 |
| TraesCS1B01G415800.1 | Wheat | cytosol | 25.35 | 29.74 |
| TraesCS1B01G415500.2 | Wheat | nucleus | 16.67 | 29.41 |
| TraesCS1B01G146400.2 | Wheat | plastid | 14.95 | 28.52 |
| KRH36075 | Soybean | nucleus | 13.23 | 24.81 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G029000.1 | EnsemblPlantsGene:TraesCS3B01G029000 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44422 | PANTHER:PTHR44422:SF3 | PFAM:PF00179 | PFscan:PS50127 | SEG:seg |
| SMART:SM00212 | SUPFAM:SSF54495 | TIGR:cd00195 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr3B:+:12472486..12476081
Molecular Weight (calculated)
109683.0 Da
IEP (calculated)
4.503
GRAVY (calculated)
-0.298
Length
990 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVVPAAASP NLYLLDLVSS GPKLIDRGLV LPDGEVDNIY LPVDTFQLLR IDDTVVYKNI SDITVVDRSH LYPGQVVGSA SDMGGQIGVV TGVNTMLNLA
101: KLDNKGLPIK VIRGVSPSSL RRIRSLNLGD FVVSGPWLGR VVEVSIDIDV LFDDGAVCRV TDAESKNLVG VCVNRHTRHR HQMNSIFHQG QSVGGPDACS
201: IFKAARWLNG YWHPERDLGT IMKLETSGVL VYWVASMHCG TDKELLEASA PSAYQNLDDL RFFCASYNCC WGLADRCFFL ETSSNEGGGT CSPDQHDDDN
301: DDDGDDDDGE DEEEEYNACS EDNQEECEAS TSQVLPPMKQ KDARFYRKQL RKLVFEGHRR VQRSQVMRHV EVEFPMLVAN TRTTVDVVWQ DGTRQQGRPS
401: ATIVPFGIWN EQEFFPGQHV VANVLPVNAA VDTTADVITT NVNNDIAASG TRLAERVGIV KSMQHEDQTV CVSWFKTPGH PDEVMEVECD DTISAYDLRL
501: DSNHSAYYGD VVIRIVPSVS TNDGESAPLL QGNKKKNVVP ADLSWVGRVV ELPNGHVQVK WGDDSMSTVS PHEIVVIKDE HYMELWLEMG DWVEDNGVDD
601: APEEPVAANM DIDLQNLDND VESVSPVMSR TRLLGLSFRS LLQLTSDMVA RGKGYLMNWR SLSSSSLPSS ELPTPVNDDS IGGAVVETSD AAVDVTSHGF
701: DGGRKAAGAT CCSDESLCFP RFDVLQISPL DHHYLDTTDQ GASRAKSWAK AVQKEWKILE NDLPETIYMQ AFEDRMDLLR VVMVGASGTP YHDGLFFFDL
801: QLPPSYPDAP PQVYYHSFGL RLNPNLYESG TVCLSLLNTF GGEGTEVWSS TESSLLQVVV SIQGLVLNDK PYYNESGYET MVDKPEGRRN ALPYSENAYL
901: LTLRTMLHLL RRPPRGFEEF VKEHFRHQGR FVLRACNALL QGNIVDNAHA TEESRKQPCS AGLRLALTKV VPSLVAAFTE IRAEGCEEYQ
101: KLDNKGLPIK VIRGVSPSSL RRIRSLNLGD FVVSGPWLGR VVEVSIDIDV LFDDGAVCRV TDAESKNLVG VCVNRHTRHR HQMNSIFHQG QSVGGPDACS
201: IFKAARWLNG YWHPERDLGT IMKLETSGVL VYWVASMHCG TDKELLEASA PSAYQNLDDL RFFCASYNCC WGLADRCFFL ETSSNEGGGT CSPDQHDDDN
301: DDDGDDDDGE DEEEEYNACS EDNQEECEAS TSQVLPPMKQ KDARFYRKQL RKLVFEGHRR VQRSQVMRHV EVEFPMLVAN TRTTVDVVWQ DGTRQQGRPS
401: ATIVPFGIWN EQEFFPGQHV VANVLPVNAA VDTTADVITT NVNNDIAASG TRLAERVGIV KSMQHEDQTV CVSWFKTPGH PDEVMEVECD DTISAYDLRL
501: DSNHSAYYGD VVIRIVPSVS TNDGESAPLL QGNKKKNVVP ADLSWVGRVV ELPNGHVQVK WGDDSMSTVS PHEIVVIKDE HYMELWLEMG DWVEDNGVDD
601: APEEPVAANM DIDLQNLDND VESVSPVMSR TRLLGLSFRS LLQLTSDMVA RGKGYLMNWR SLSSSSLPSS ELPTPVNDDS IGGAVVETSD AAVDVTSHGF
701: DGGRKAAGAT CCSDESLCFP RFDVLQISPL DHHYLDTTDQ GASRAKSWAK AVQKEWKILE NDLPETIYMQ AFEDRMDLLR VVMVGASGTP YHDGLFFFDL
801: QLPPSYPDAP PQVYYHSFGL RLNPNLYESG TVCLSLLNTF GGEGTEVWSS TESSLLQVVV SIQGLVLNDK PYYNESGYET MVDKPEGRRN ALPYSENAYL
901: LTLRTMLHLL RRPPRGFEEF VKEHFRHQGR FVLRACNALL QGNIVDNAHA TEESRKQPCS AGLRLALTKV VPSLVAAFTE IRAEGCEEYQ
001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
Arabidopsis Description
Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.