Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G029300.1 | Wheat | peroxisome | 19.98 | 93.49 |
| TraesCS3A01G030400.1 | Wheat | plasma membrane | 85.19 | 85.96 |
| TraesCS3D01G015200.1 | Wheat | cytosol | 79.42 | 79.9 |
| TraesCS7D01G206600.1 | Wheat | cytosol | 17.1 | 73.82 |
| TraesCS4D01G289700.1 | Wheat | cytosol | 15.71 | 69.0 |
| Os05t0153132-00 | Rice | cytosol | 15.41 | 59.16 |
| TraesCS2D01G400600.1 | Wheat | nucleus | 54.87 | 55.2 |
| TraesCS2D01G600300.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 48.41 | 50.05 |
| TraesCS2D01G051900.1 | Wheat | cytosol | 46.92 | 48.11 |
| OQU79703 | Sorghum | cytosol | 35.79 | 41.71 |
| TraesCS5D01G272300.1 | Wheat | cytosol, nucleus, plastid | 12.82 | 37.72 |
| OQU84284 | Sorghum | mitochondrion, nucleus, plasma membrane, plastid | 30.82 | 36.56 |
| TraesCS3D01G164800.2 | Wheat | mitochondrion, nucleus, plastid | 13.42 | 35.71 |
| TraesCS3D01G164900.3 | Wheat | nucleus | 12.92 | 35.33 |
| TraesCS3D01G032000.4 | Wheat | nucleus | 36.18 | 32.7 |
| TraesCS3D01G164200.1 | Wheat | nucleus, plastid | 14.41 | 32.15 |
| TraesCS5D01G272400.1 | Wheat | nucleus | 13.92 | 30.91 |
| TraesCS3D01G269000.1 | Wheat | nucleus | 15.81 | 30.0 |
| TraesCS1D01G396300.1 | Wheat | nucleus | 25.35 | 29.86 |
| TraesCS1D01G396000.2 | Wheat | cytosol, mitochondrion, nucleus | 16.1 | 28.98 |
| TraesCS1D01G125200.2 | Wheat | plastid | 14.71 | 28.41 |
| KRH36075 | Soybean | nucleus | 13.52 | 25.76 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G015300.1 | EnsemblPlantsGene:TraesCS3D01G015300 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44422 | PANTHER:PTHR44422:SF3 | PFAM:PF00179 | PFscan:PS50127 | SEG:seg |
| SMART:SM00212 | SUPFAM:SSF54495 | TIGR:cd00195 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr3D:-:5406532..5410203
Molecular Weight (calculated)
111064.0 Da
IEP (calculated)
4.593
GRAVY (calculated)
-0.333
Length
1006 amino acids
Sequence
(BLAST)
(BLAST)
0001: MVVPAAASPN LYLLDLVKSG RMLIDRGLVL PDGQVDNIYL PVDTFKLLRI DDSVVYKNVG DIKVVDRSHL YPGQVVGLAS DMGGQIGVVT GVNTVLNLAK
0101: LDNNGVPTKV IRGVSPSSLR RVRSLNLGDF VVSGPWLGRV VEVSIDVDVL FDDGAVCRIT DADSTNLARV HEIGTMETLH RHQMNSQFHQ GQQVSLRGAC
0201: SLFKDARWLN GYWHPYRQVG TIMKVETSGV LVYWVASRHC GTDKGLVEAS APPAYQNPND LTFFCAASNC CWGLADRCFF LETSSAKGHA ACTPDQNKNN
0301: NDDDDEKEEE WEEWEGEEYN ACSQDNQDEC EAASTSQVVP PTKQNDARFY RKQLRKVVFE GHRRAQRPRV MRHVEVEFPM VVANTCTTVD VLWQDGTRQH
0401: GRPSATLVPF GIVNEQEFFP GQHVVADVIL NNDVIDTTGD HVGGTTTTSF NNDIAAAGIG PTKCVGIVKS LQYEDQTVCV SWLKTPRHPN EAREVECHDT
0501: VSAYDLKLDS NHSAYYGDIV IRLLPPGSTD DGESTPPLQG NKKTNAIPAD LSWVGRVVEL PNGHIQVKWG DGSMSTVLPH EIAVVKDEHY MELWNEMGDW
0601: VEDDGIDGDL LEDDGIDDAP EEPAAASTDL GNDVEGVNPA VSSTSLLGFS FRSLLQLTGD MVARGKGYLM NWQPSSTSLP SSELPVPTDD DSIGGAAMVI
0701: SDADVTSHGY DKERTKAADA DATCCCDESF YFPCFDVLQI SPLDHHYLDS TDQEMQGASR GKSWAKTVQK EWKILEKDLP ETIYVRAFED RMDLLRVVMV
0801: GASGTPYDHG LFFFDLQLPP SYPDAPPQVY YHSFGLRLNP NLYESGTVCL SLLNTFGGEG TEVWSSATSS LLQVVVSIQG LVLNDQPYYN EAGYETLAGK
0901: PEGHRNALPY NENAYLLTLR TMQHLLRRPP RGFEEFIKEH FRRQGKFVLR TCNVWLQGNV VDDAHATEAT RKRPCSAGLR LALTNMTPSL VAAFTEIGAE
1001: GCEEFQ
0101: LDNNGVPTKV IRGVSPSSLR RVRSLNLGDF VVSGPWLGRV VEVSIDVDVL FDDGAVCRIT DADSTNLARV HEIGTMETLH RHQMNSQFHQ GQQVSLRGAC
0201: SLFKDARWLN GYWHPYRQVG TIMKVETSGV LVYWVASRHC GTDKGLVEAS APPAYQNPND LTFFCAASNC CWGLADRCFF LETSSAKGHA ACTPDQNKNN
0301: NDDDDEKEEE WEEWEGEEYN ACSQDNQDEC EAASTSQVVP PTKQNDARFY RKQLRKVVFE GHRRAQRPRV MRHVEVEFPM VVANTCTTVD VLWQDGTRQH
0401: GRPSATLVPF GIVNEQEFFP GQHVVADVIL NNDVIDTTGD HVGGTTTTSF NNDIAAAGIG PTKCVGIVKS LQYEDQTVCV SWLKTPRHPN EAREVECHDT
0501: VSAYDLKLDS NHSAYYGDIV IRLLPPGSTD DGESTPPLQG NKKTNAIPAD LSWVGRVVEL PNGHIQVKWG DGSMSTVLPH EIAVVKDEHY MELWNEMGDW
0601: VEDDGIDGDL LEDDGIDDAP EEPAAASTDL GNDVEGVNPA VSSTSLLGFS FRSLLQLTGD MVARGKGYLM NWQPSSTSLP SSELPVPTDD DSIGGAAMVI
0701: SDADVTSHGY DKERTKAADA DATCCCDESF YFPCFDVLQI SPLDHHYLDS TDQEMQGASR GKSWAKTVQK EWKILEKDLP ETIYVRAFED RMDLLRVVMV
0801: GASGTPYDHG LFFFDLQLPP SYPDAPPQVY YHSFGLRLNP NLYESGTVCL SLLNTFGGEG TEVWSSATSS LLQVVVSIQG LVLNDQPYYN EAGYETLAGK
0901: PEGHRNALPY NENAYLLTLR TMQHLLRRPP RGFEEFIKEH FRRQGKFVLR TCNVWLQGNV VDDAHATEAT RKRPCSAGLR LALTNMTPSL VAAFTEIGAE
1001: GCEEFQ
001: MVEIKDSSNV RKLKEEFLRD FKRFDTVEDF SDHHYAAEGS PAKLSLWHLK FKGRPKNWVK DIQKEWKILD KNLPETIFVR ACESRIDLLR AVIIGAEGTP
101: YHDGLFFFDI QFPDTYPSVP PKVHYHSGGL RINPNLYKCG KVCLSLISTW TGKKREKWLP KESTMLQLLV SIQALILNEK PYYNEPGYEK SMGTPLGESY
201: SKDYSENVFV FSLKTMHFEE FVRSHFFVRS HDIVKACNAY KDGAPVGSID KGGVKKQTRQ RGSLKFRINV TSFMKTVVDE FVNLGAIREA NHRGEPNPTL
301: FSCFFFCYLE LIICSV
101: YHDGLFFFDI QFPDTYPSVP PKVHYHSGGL RINPNLYKCG KVCLSLISTW TGKKREKWLP KESTMLQLLV SIQALILNEK PYYNEPGYEK SMGTPLGESY
201: SKDYSENVFV FSLKTMHFEE FVRSHFFVRS HDIVKACNAY KDGAPVGSID KGGVKKQTRQ RGSLKFRINV TSFMKTVVDE FVNLGAIREA NHRGEPNPTL
301: FSCFFFCYLE LIICSV
Arabidopsis Description
UBC39Putative ubiquitin-conjugating enzyme E2 39 [Source:UniProtKB/Swiss-Prot;Acc:F4HPP7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.