Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G596800.1 | Wheat | cytosol | 88.39 | 92.18 |
| TraesCS2D01G600300.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 91.16 | 91.16 |
| TraesCS3A01G030200.1 | Wheat | endoplasmic reticulum | 15.83 | 71.63 |
| TraesCS2A01G441700.1 | Wheat | cytosol | 18.19 | 71.08 |
| Os05t0153132-00 | Rice | cytosol | 15.42 | 57.25 |
| TraesCS2A01G403400.1 | Wheat | cytosol | 51.18 | 50.25 |
| TraesCS3A01G030400.1 | Wheat | plasma membrane | 50.57 | 49.35 |
| TraesCS3A01G031600.1 | Wheat | cytosol | 49.95 | 48.75 |
| OQU79703 | Sorghum | cytosol | 37.41 | 42.18 |
| OQU84284 | Sorghum | mitochondrion, nucleus, plasma membrane, plastid | 32.07 | 36.79 |
| TraesCS3A01G157200.1 | Wheat | mitochondrion, nucleus, plastid | 13.87 | 36.1 |
| TraesCS3A01G157300.2 | Wheat | nucleus | 12.74 | 33.79 |
| TraesCS3A01G047700.3 | Wheat | nucleus | 35.56 | 31.09 |
| TraesCS1A01G388400.1 | Wheat | cytosol | 26.41 | 30.49 |
| TraesCS3A01G269200.1 | Wheat | nucleus | 16.44 | 30.19 |
| TraesCS3A01G156300.1 | Wheat | nucleus, plastid | 14.08 | 30.18 |
| TraesCS1A01G388000.1 | Wheat | cytosol, mitochondrion, nucleus | 16.96 | 29.41 |
| TraesCS1A01G129500.2 | Wheat | nucleus | 14.9 | 29.41 |
| KRH36075 | Soybean | nucleus | 13.36 | 24.62 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G586300.1 | EnsemblPlantsGene:TraesCS2A01G586300 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44422 | PANTHER:PTHR44422:SF3 | PFAM:PF00179 | PFscan:PS50127 | SEG:seg |
| SMART:SM00212 | SUPFAM:SSF54495 | TIGR:cd00195 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2A:+:776600184..776603874
Molecular Weight (calculated)
106291.0 Da
IEP (calculated)
4.732
GRAVY (calculated)
-0.325
Length
973 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVAVAAPTT NFYGQDLVSF QSKLGILAPA TWLSHPADEL LMLGIDGLPF SKEAGDTDIA LVDRSFLHVG QAVVSASDVG GQIGVVTGVT TTLDLVDRGG
101: DATGEVIGGL PPSAVRRVRA LSLGDYVVSG QGQWLGRVVE VSLDVDVVFD DGAICRVTDA ESPTMQLRPA ESTPGLHRQQ TNVTFYPGLS VASGDPSVVF
201: GGARWLSGHW KKRHEVGMVT KVEMAGVLVH WIVSAYGHTD EQFLHGSAPP AYQKPENLMY FCSAYECSWG VGDRCFLREG TAASPSSEID SLHDPQHQSS
301: LQSDDSSSSE EEEEEEEEEV EPSPPSLTAG LATAPVDKEE RSYRKQLRKP MFIRYRGRAR RGYQWSAPLR TMTVSRTRTT VNVLWQDGTR QHRVPSTSLN
401: PFDMMNEHEV FPGQYVIDAR DDDFTGGSTV RRVGVVRNLN SKDHTAHVSW FKAASGGREV ECDDEAVSVY DLGRDPDHSV FYGDVVVRTL SSNVSGNNAR
501: QPQVLDLSWV GRVVDLSDGH IQVKWGDDTT SVVLPHEITV ASKEHYSELR AEMGDWLEED SVDNHQESGA ADVDNDPTDT RNIQGARVED GGSSANESDG
601: HAATRTNRLG GVIQSMIRSV VQVLARAKLL YLVNRTSSST SDLPAAGMHN VVEVPTHVSL GGNHVDTSIE GVVTEVVFPP VIRSDETGDG DVKYAVRSGE
701: AATGDDDTLI FPNFDVVQSP PDHHYLDTMD QGSSNGGKSW VKTVQKEWKI LEDSLPDTIY VRAYEDRMDL LRAAMVGASG TPYQHGLFFF DLQLPPSYPA
801: VPPQVYYRSF GLRLNPNLYP SGTVCLSLLN TFGGEGTEVW SPETSSILQV VVSLQALVLN GQPYYNEAGH ETLVDTPEGR RNALPYSENA FLLTLRTALH
901: LLRQPPRGFE GFVTDHFRQR GRHVLMACDA YLRGCIHADE GGMELPCSTG FRIALTNLVP RLVAAFTNMD THG
101: DATGEVIGGL PPSAVRRVRA LSLGDYVVSG QGQWLGRVVE VSLDVDVVFD DGAICRVTDA ESPTMQLRPA ESTPGLHRQQ TNVTFYPGLS VASGDPSVVF
201: GGARWLSGHW KKRHEVGMVT KVEMAGVLVH WIVSAYGHTD EQFLHGSAPP AYQKPENLMY FCSAYECSWG VGDRCFLREG TAASPSSEID SLHDPQHQSS
301: LQSDDSSSSE EEEEEEEEEV EPSPPSLTAG LATAPVDKEE RSYRKQLRKP MFIRYRGRAR RGYQWSAPLR TMTVSRTRTT VNVLWQDGTR QHRVPSTSLN
401: PFDMMNEHEV FPGQYVIDAR DDDFTGGSTV RRVGVVRNLN SKDHTAHVSW FKAASGGREV ECDDEAVSVY DLGRDPDHSV FYGDVVVRTL SSNVSGNNAR
501: QPQVLDLSWV GRVVDLSDGH IQVKWGDDTT SVVLPHEITV ASKEHYSELR AEMGDWLEED SVDNHQESGA ADVDNDPTDT RNIQGARVED GGSSANESDG
601: HAATRTNRLG GVIQSMIRSV VQVLARAKLL YLVNRTSSST SDLPAAGMHN VVEVPTHVSL GGNHVDTSIE GVVTEVVFPP VIRSDETGDG DVKYAVRSGE
701: AATGDDDTLI FPNFDVVQSP PDHHYLDTMD QGSSNGGKSW VKTVQKEWKI LEDSLPDTIY VRAYEDRMDL LRAAMVGASG TPYQHGLFFF DLQLPPSYPA
801: VPPQVYYRSF GLRLNPNLYP SGTVCLSLLN TFGGEGTEVW SPETSSILQV VVSLQALVLN GQPYYNEAGH ETLVDTPEGR RNALPYSENA FLLTLRTALH
901: LLRQPPRGFE GFVTDHFRQR GRHVLMACDA YLRGCIHADE GGMELPCSTG FRIALTNLVP RLVAAFTNMD THG
001: MVEIKDSSNV RKLKEEFLRD FKRFDTVEDF SDHHYAAEGS PAKLSLWHLK FKGRPKNWVK DIQKEWKILD KNLPETIFVR ACESRIDLLR AVIIGAEGTP
101: YHDGLFFFDI QFPDTYPSVP PKVHYHSGGL RINPNLYKCG KVCLSLISTW TGKKREKWLP KESTMLQLLV SIQALILNEK PYYNEPGYEK SMGTPLGESY
201: SKDYSENVFV FSLKTMHFEE FVRSHFFVRS HDIVKACNAY KDGAPVGSID KGGVKKQTRQ RGSLKFRINV TSFMKTVVDE FVNLGAIREA NHRGEPNPTL
301: FSCFFFCYLE LIICSV
101: YHDGLFFFDI QFPDTYPSVP PKVHYHSGGL RINPNLYKCG KVCLSLISTW TGKKREKWLP KESTMLQLLV SIQALILNEK PYYNEPGYEK SMGTPLGESY
201: SKDYSENVFV FSLKTMHFEE FVRSHFFVRS HDIVKACNAY KDGAPVGSID KGGVKKQTRQ RGSLKFRINV TSFMKTVVDE FVNLGAIREA NHRGEPNPTL
301: FSCFFFCYLE LIICSV
Arabidopsis Description
UBC39Putative ubiquitin-conjugating enzyme E2 39 [Source:UniProtKB/Swiss-Prot;Acc:F4HPP7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.