CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50716	Soybean	nucleus	68.47	62.35
KRH02367	Soybean	cytosol, golgi, nucleus	62.37	54.44
KRH02369	Soybean	cytosol	49.83	44.14
VIT_05s0077g00850.t01	Wine grape	nucleus	52.88	43.09
KRH26136	Soybean	cytosol	41.69	40.46
PGSC0003DMT400011956	Potato	cytosol	43.39	39.88
KRH26135	Soybean	cytosol	41.69	31.62
Solyc01g079290.1.1	Tomato	cytosol	28.47	29.58
KRH58633	Soybean	cytosol, nucleus	38.98	25.67
KRH42541	Soybean	nucleus	38.64	24.05
KRH27240	Soybean	cytosol	41.36	17.33
KRH22096	Soybean	cytosol	41.02	16.74
KRH55293	Soybean	cytosol, peroxisome, plastid	40.68	13.81
KRH21442	Soybean	nucleus	41.02	13.17
KRH20454	Soybean	cytosol, nucleus, peroxisome	40.68	12.86
KRH10881	Soybean	nucleus	40.0	12.77
KRH50043	Soybean	cytosol	39.32	12.51
KRG90672	Soybean	nucleus	40.0	10.5
KRH36075	Soybean	nucleus	0.0	0.0

Protein Annotations

Gene3D:3.10.110.10	MapMan:35.1	UniProt:A0A0R0F7L9	EMBL:ACUP02010303	EnsemblPlantsGene:GLYMA_17G034300	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	GO:GO:0031625	GO:GO:0061630	InterPro:IPR000608	InterPro:IPR016135
EnsemblPlants:KRH02368	ProteinID:KRH02368	ProteinID:KRH02368.1	PFAM:PF00179	PFscan:PS50127	PANTHER:PTHR44273
PANTHER:PTHR44273:SF4	SMART:SM00212	SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI0006EDFA94
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:2506082..2506969

Molecular Weight (calculated)

34221.4 Da

IEP (calculated)

10.014

GRAVY (calculated)

-0.402

Length

295 amino acids

Sequence
(BLAST)

001: MKEWKILEQS LPESIYVRVY ERRIDLMRAV IVGTAGTPYH DGLFFFDIMF PSDYPKHPPM LHFHSFGYRI NPNLYINGKV CLSLLNTWNG KGTEMWDPSK
101: STMLQVLVSI QGLVLNKNPY FNEPLRLFDS ESKSRVYNEN AFIITCYTSF LLLQRPLRNF EAFVSAHFCE RAFPILSACS DYVNGRVEVG YYSSDLRSSS
201: STVRVSREFK EKMIQFYPKL FQAFRLKGAS VGGLVEHLEL EIEQSEKKSS GGGQRQQLKN KSRRIFKKVM EKIKQTLGWK KKSQIEGRDR SLQSS

Best Arabidopsis Sequence Match ( AT1G53025.1 )
(BLAST)

001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR

Arabidopsis Description

Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.