Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plasma membrane 1
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400023282 | Potato | cytosol | 89.44 | 89.44 |
| KRH50716 | Soybean | nucleus | 33.8 | 29.63 |
| KRH02368 | Soybean | cytosol | 29.58 | 28.47 |
| KRH02367 | Soybean | cytosol, golgi, nucleus | 32.39 | 27.22 |
| KRH02369 | Soybean | cytosol | 30.99 | 26.43 |
| VIT_05s0077g00850.t01 | Wine grape | nucleus | 32.04 | 25.14 |
| Solyc07g053960.2.1 | Tomato | nucleus | 29.93 | 18.36 |
| Solyc10g007000.2.1 | Tomato | cytosol | 30.99 | 13.19 |
| Solyc12g013820.1.1 | Tomato | nucleus | 31.69 | 12.13 |
| Solyc02g078210.2.1 | Tomato | cytosol | 32.04 | 9.84 |
| Solyc01g111680.2.1 | Tomato | nucleus | 29.23 | 8.37 |
Protein Annotations
| Gene3D:3.10.110.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0031625 |
| GO:GO:0061630 | InterPro:IPR000608 | InterPro:IPR016135 | UniProt:K4AXH4 | EMBL:KY246918 | PFAM:PF00179 |
| PFscan:PS50127 | PANTHER:PTHR44273 | PANTHER:PTHR44273:SF2 | SMART:SM00212 | SUPFAM:SSF54495 | EnsemblPlantsGene:Solyc01g079290.1 |
| EnsemblPlants:Solyc01g079290.1.1 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI0002761B41 | SEG:seg | : |
Description
UBC26 [Source:UniProtKB/TrEMBL;Acc:K4AXH4]
Coordinates
chr1:-:78372195..78373049
Molecular Weight (calculated)
33137.9 Da
IEP (calculated)
7.882
GRAVY (calculated)
-0.471
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEANKNMYG EIEEIIDDIE QRFNQINKFS ILYYPPNDHH FLKYDRNSKN MGLDSAFRQQ IEKEWLLLEK KLPSSIVVKS YEKRIDLMRT VIVGPPNTPY
101: AHGLFFFDIL FPRNYPNCPP RIHYHSYQLD LNEFLDPKGK VTLSLLEGGN IVANWYCGVQ GKWNPHKSNI LQVLTAIQTS ILSTTGVNPC GREGYKNAFT
201: STCKGMICML KEPLMNFRDF VAGYFRTRAH HILLNYKKQM DDSDSMVDLF HELYRAFEQN GTYCKHHILV DLPAEEKIKQ PRVS
101: AHGLFFFDIL FPRNYPNCPP RIHYHSYQLD LNEFLDPKGK VTLSLLEGGN IVANWYCGVQ GKWNPHKSNI LQVLTAIQTS ILSTTGVNPC GREGYKNAFT
201: STCKGMICML KEPLMNFRDF VAGYFRTRAH HILLNYKKQM DDSDSMVDLF HELYRAFEQN GTYCKHHILV DLPAEEKIKQ PRVS
001: MEPNVVEIAT PPAASCSRIR TPTKAETPEV IDVEEYDLQN GGVPNGNNVD YKNKGKAIDF DSMSYGDYGE EDEYAVGSPG DDYGYPESSP LSNSLLDPES
101: LIYEDDENYS EQYDFEMEAE PDNYSMYQDL FDGKDIPTGV EVSMDWFPNS ADKESASSSK SSHANNGNNS SKKATKASGI HSQFSSDMET PVAQPWNALP
201: HKAEGVIPNS AYALPQNSKA FQPPYAVHYS ALKTAFSNYL QPQTPDTVLG EAPAPAAGSS GLLPPNTPGF KSNAARFKEE PPILPPDDSR VKRNMEDYLG
301: LYLFFKRFDI VEDFSDHHYA SKGTTSKQHS KDWAKRIQDE WRILEKDLPE MIFVRAYESR MDLLRAVIIG AQGTPYHDGL FFFDIFFPDT YPSTPPIVHY
401: HSGGLRINPN LYNCGKVCLS LLGTWSGNQR EKWIPNTSTM LQVLVSIQGL ILNQKPYFNE PGYERSAGSA HGESTSKAYS ENTFILSLKT MVYTMRRPPK
501: YFEDFAYGHF FSCAHDVLKA CNAYRNGATP GYLVKGAPDV EENSAGMSSL KFRTDVATFV ETVLLKEFIL LGVLGLEPEE EEKTPETIIV AESSKCTRSR
601: SKRDRVSSS
101: LIYEDDENYS EQYDFEMEAE PDNYSMYQDL FDGKDIPTGV EVSMDWFPNS ADKESASSSK SSHANNGNNS SKKATKASGI HSQFSSDMET PVAQPWNALP
201: HKAEGVIPNS AYALPQNSKA FQPPYAVHYS ALKTAFSNYL QPQTPDTVLG EAPAPAAGSS GLLPPNTPGF KSNAARFKEE PPILPPDDSR VKRNMEDYLG
301: LYLFFKRFDI VEDFSDHHYA SKGTTSKQHS KDWAKRIQDE WRILEKDLPE MIFVRAYESR MDLLRAVIIG AQGTPYHDGL FFFDIFFPDT YPSTPPIVHY
401: HSGGLRINPN LYNCGKVCLS LLGTWSGNQR EKWIPNTSTM LQVLVSIQGL ILNQKPYFNE PGYERSAGSA HGESTSKAYS ENTFILSLKT MVYTMRRPPK
501: YFEDFAYGHF FSCAHDVLKA CNAYRNGATP GYLVKGAPDV EENSAGMSSL KFRTDVATFV ETVLLKEFIL LGVLGLEPEE EEKTPETIIV AESSKCTRSR
601: SKRDRVSSS
Arabidopsis Description
UBC25Probable ubiquitin-conjugating enzyme E2 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.