CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50716	Soybean	nucleus	51.05	52.47
KRH02368	Soybean	cytosol	44.14	49.83
KRH02367	Soybean	cytosol, golgi, nucleus	49.25	48.52
VIT_05s0077g00850.t01	Wine grape	nucleus	51.95	47.79
PGSC0003DMT400011956	Potato	cytosol	41.44	42.99
KRH26136	Soybean	cytosol	34.53	37.83
KRH26135	Soybean	cytosol	37.84	32.39
Solyc01g079290.1.1	Tomato	cytosol	26.43	30.99
KRH58633	Soybean	cytosol, nucleus	34.53	25.67
KRH42541	Soybean	nucleus	34.53	24.26
KRH27240	Soybean	cytosol	38.44	18.18
KRH22096	Soybean	cytosol	38.44	17.7
KRH55293	Soybean	cytosol, peroxisome, plastid	38.44	14.73
KRH21442	Soybean	nucleus	39.34	14.25
KRH10881	Soybean	nucleus	39.04	14.07
KRH20454	Soybean	cytosol, nucleus, peroxisome	38.44	13.72
KRH50043	Soybean	cytosol	36.64	13.16
KRG90672	Soybean	nucleus	37.84	11.21
KRH36075	Soybean	nucleus	0.0	0.0

Protein Annotations

EntrezGene:100811389	Gene3D:3.10.110.10	MapMan:35.1	EMBL:ACUP02010303	EnsemblPlantsGene:GLYMA_17G034400	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	GO:GO:0031625	GO:GO:0061630	InterPro:IPR000608	InterPro:IPR016135
UniProt:K7MJR2	EnsemblPlants:KRH02369	ProteinID:KRH02369	ProteinID:KRH02369.1	PFAM:PF00179	PFscan:PS50127
PANTHER:PTHR44273	PANTHER:PTHR44273:SF4	SMART:SM00212	SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_enzyme/RWD
UniParc:UPI000233F391	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:2513264..2514265

Molecular Weight (calculated)

38265.9 Da

IEP (calculated)

9.473

GRAVY (calculated)

-0.285

Length

333 amino acids

Sequence
(BLAST)

001: MANTKDIERF DVVSDDSDHY FLSAVGPNPY SFTNARSDVH KRIMMEWKIL ANNNLPESIY VRVYANRIDL LRAVIVGAAG TPYHDGLFFF DIAFPHDYPF
101: HPPEVHYRSY GFSLNPNLYN NGHVCLSLIN TWVGKSTEKW DPCGSTVLQL LLSLQALVLN DKPFFNDFWC EMIGRGRGLF EKKSLAYNDT VFALNCKTIL
201: GLLRHPPRNF QTFVVGHFRN RARAILGACD DYANGRVRVG RYSEDGDGEA SDRRVRVSEK FRESMRVLYP QLLEIFLRCG AFSQSDAERY LKMERTNVLS
301: KNMGNVTNRT YRVLVRKVIG KIRKLYASKL ISC

Best Arabidopsis Sequence Match ( AT1G53023.1 )
(BLAST)

001: MVEIKDSSNV RKLKEEFLRD FKRFDTVEDF SDHHYAAEGS PAKLSLWHLK FKGRPKNWVK DIQKEWKILD KNLPETIFVR ACESRIDLLR AVIIGAEGTP
101: YHDGLFFFDI QFPDTYPSVP PKVHYHSGGL RINPNLYKCG KVCLSLISTW TGKKREKWLP KESTMLQLLV SIQALILNEK PYYNEPGYEK SMGTPLGESY
201: SKDYSENVFV FSLKTMHFEE FVRSHFFVRS HDIVKACNAY KDGAPVGSID KGGVKKQTRQ RGSLKFRINV TSFMKTVVDE FVNLGAIREA NHRGEPNPTL
301: FSCFFFCYLE LIICSV

Arabidopsis Description

UBC39Putative ubiquitin-conjugating enzyme E2 39 [Source:UniProtKB/Swiss-Prot;Acc:F4HPP7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.