CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02368	Soybean	cytosol	62.35	68.47
KRH02367	Soybean	cytosol, golgi, nucleus	67.9	65.09
VIT_05s0077g00850.t01	Wine grape	nucleus	57.1	51.1
KRH02369	Soybean	cytosol	52.47	51.05
PGSC0003DMT400011956	Potato	cytosol	46.6	47.04
KRH26136	Soybean	cytosol	40.74	43.42
KRH26135	Soybean	cytosol	43.52	36.25
Solyc01g079290.1.1	Tomato	cytosol	29.63	33.8
KRH58633	Soybean	cytosol, nucleus	40.43	29.24
KRH42541	Soybean	nucleus	40.12	27.43
KRH27240	Soybean	cytosol	42.59	19.6
KRH22096	Soybean	cytosol	42.28	18.95
KRH55293	Soybean	cytosol, peroxisome, plastid	42.28	15.77
KRH21442	Soybean	nucleus	43.52	15.34
KRH20454	Soybean	cytosol, nucleus, peroxisome	43.21	15.01
KRH10881	Soybean	nucleus	42.59	14.94
KRH50043	Soybean	cytosol	41.67	14.56
KRG90672	Soybean	nucleus	40.12	11.57
KRH36075	Soybean	nucleus	0.0	0.0

Protein Annotations

EntrezGene:100791343	Gene3D:3.10.110.10	MapMan:35.1	EMBL:ACUP02004710	EnsemblPlantsGene:GLYMA_07G239100	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	GO:GO:0031625	GO:GO:0061630	InterPro:IPR000608	InterPro:IPR016135
UniProt:K7L3J2	EnsemblPlants:KRH50716	ProteinID:KRH50716	ProteinID:KRH50716.1	PFAM:PF00179	PFscan:PS50127
PANTHER:PTHR44273	PANTHER:PTHR44273:SF4	SMART:SM00212	SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_enzyme/RWD
UniParc:UPI0002338BEF	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:42012818..42013792

Molecular Weight (calculated)

37158.3 Da

IEP (calculated)

10.103

GRAVY (calculated)

-0.469

Length

324 amino acids

Sequence
(BLAST)

001: MENTNGFVHF DVVSDDADHH FLGSNKGKCF TDLKSEVYRT IMKEWKILEQ NLPESIYVRV YERRIDLMRA VIVGAAGTPY HDGLFFFDIG FPSDYPKNPP
101: KLHYHSFGYR HNPNLYSSGR VCLSLLNTWT GRKSEKWDPS GSTMLQVLLS IQALVLNKKP YYNEPGLASI ASSEWRSRAY NENVFLITCS TSLHLLRRPP
201: FNFEAFVSAH FRQRAFRILS ACSDYTNGRA RVGHYSFDLR LSSSSSKLHV SRSFKKQMIA FYPRLLQAFR QNGASLEGFA EHLELESKHS ENKSGGIFKK
301: VMEKIKKAFG LKKNKGQQSR LESA

Best Arabidopsis Sequence Match ( AT1G53025.1 )
(BLAST)

001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR

Arabidopsis Description

Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.