CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26136	Soybean	cytosol	29.0	82.89
KRH26135	Soybean	cytosol	36.94	82.52
CDY30673	Canola	nucleus	12.43	59.67
HORVU3Hr1G109730.1	Barley	cytosol	10.82	58.39
CDY51802	Canola	cytosol	13.23	56.1
HORVU1Hr1G090980.2	Barley	cytosol	12.54	54.5
Bra036393.1-P	Field mustard	cytosol, extracellular	5.29	54.12
GSMUA_Achr7P25120_001	Banana	cytosol	17.61	51.17
Bra038095.1-P	Field mustard	cytosol, nucleus, peroxisome	18.87	50.46
CDY25883	Canola	cytosol	16.23	49.82
AT1G53023.1	Thale cress	cytosol	17.72	48.73
Bra041020.1-P	Field mustard	plastid	18.18	48.02
CDY25884	Canola	plastid	17.95	47.13
Os01t0677500-00	Rice	cytosol	18.07	45.51
Zm00001d009007_P001	Maize	cytosol	12.77	45.31
TraesCS5D01G272300.1	Wheat	cytosol, nucleus, plastid	16.92	42.98
KRH27240	Soybean	cytosol	34.64	42.76
Os09t0294300-01	Rice	nucleus	21.29	42.73
CDX71178	Canola	cytosol	21.17	42.69
KRH22096	Soybean	cytosol	35.21	42.32
HORVU5Hr1G000190.3	Barley	cytosol	6.33	42.31
KRH50716	Soybean	nucleus	15.77	42.28
CDY55875	Canola	nucleus	20.6	41.92
TraesCS3B01G183600.1	Wheat	mitochondrion, nucleus	18.18	41.91
Bra030965.1-P	Field mustard	nucleus	22.55	41.7
HORVU3Hr1G031950.4	Barley	mitochondrion	17.61	41.69
HORVU2Hr1G062530.3	Barley	cytosol	6.21	41.54
TraesCS3B01G183800.2	Wheat	nucleus	17.49	41.3
TraesCS3D01G164900.3	Wheat	nucleus	17.49	41.3
TraesCS3D01G164800.2	Wheat	mitochondrion, nucleus, plastid	17.95	41.27
TraesCS3A01G157200.1	Wheat	mitochondrion, nucleus, plastid	17.72	41.18
TraesCS3A01G157300.2	Wheat	nucleus	17.26	40.87
CDY02528	Canola	cytosol	22.55	40.83
KRH02368	Soybean	cytosol	13.81	40.68
CDY47562	Canola	cytosol	22.55	40.66
Zm00001d051483_P001	Maize	mitochondrion, nucleus, peroxisome	9.44	40.59
GSMUA_Achr6P22670_001	Banana	cytosol	21.17	40.17
Zm00001d015028_P001	Maize	cytosol, mitochondrion, nucleus	9.32	40.1
Bra040814.1-P	Field mustard	cytosol	21.4	40.0
CDY25886	Canola	cytosol	21.4	40.0
KXG31477	Sorghum	mitochondrion, plastid	16.8	39.67
CDY24125	Canola	cytosol	21.98	39.3
KRH58633	Soybean	cytosol, nucleus	20.02	38.84
CDY26018	Canola	cytosol	22.67	38.78
Bra019007.1-P	Field mustard	cytosol	22.09	38.63
HORVU3Hr1G031890.10	Barley	cytosol, nucleus	17.61	38.44
KRH02369	Soybean	cytosol	14.73	38.44
Zm00001d039280_P005	Maize	mitochondrion, nucleus, plastid	16.46	38.34
CDX82439	Canola	cytosol	20.14	38.13
Zm00001d009513_P003	Maize	cytosol	17.38	38.04
Os05t0557600-01	Rice	cytosol	22.21	37.92
EES19929	Sorghum	nucleus	22.09	37.87
GSMUA_Achr9P00210_001	Banana	plastid	23.25	37.62
KRH42541	Soybean	nucleus	20.48	37.55
KRH02367	Soybean	cytosol, golgi, nucleus	14.5	37.28
Zm00001d047959_P001	Maize	cytosol	9.55	37.22
GSMUA_Achr10P...	Banana	nucleus	20.37	37.18
CDX75824	Canola	cytosol	19.91	37.05
VIT_19s0014g02760.t01	Wine grape	nucleus	31.65	36.67
TraesCS3A01G156300.1	Wheat	nucleus, plastid	19.1	36.56
TraesCS3B01G183000.1	Wheat	nucleus, plastid	18.99	36.5
TraesCS3D01G164200.1	Wheat	nucleus, plastid	18.76	36.14
TraesCS3A01G269200.1	Wheat	nucleus	21.86	35.85
TraesCS3B01G303300.1	Wheat	nucleus	21.86	35.85
CDX98552	Canola	cytosol	22.44	35.85
TraesCS3D01G269000.1	Wheat	nucleus	21.75	35.66
Os05t0232500-01	Rice	nucleus, plastid	19.1	35.55
Bra001591.1-P	Field mustard	nucleus	21.98	35.44
Os01t0233900-01	Rice	mitochondrion	18.64	34.84
HORVU3Hr1G031730.4	Barley	nucleus, plastid	19.22	34.79
CDX97660	Canola	cytosol	22.09	34.78
EES17914	Sorghum	plastid	18.41	34.78
TraesCS1B01G415500.2	Wheat	nucleus	22.44	34.76
Zm00001d039285_P001	Maize	cytosol, plastid	17.95	34.67
AT1G53025.2	Thale cress	nucleus	22.21	34.65
Solyc10g007000.2.1	Tomato	cytosol	26.58	34.63
TraesCS1A01G388000.1	Wheat	cytosol, mitochondrion, nucleus	22.32	34.58
Bra027252.1-P	Field mustard	cytosol	21.86	34.55
TraesCS1D01G396000.2	Wheat	cytosol, mitochondrion, nucleus	22.21	34.53
TraesCS5B01G264000.1	Wheat	nucleus	17.95	34.44
KXG33109	Sorghum	nucleus	21.06	34.27
KXG31481	Sorghum	nucleus	18.07	34.2
TraesCS5D01G272400.1	Wheat	nucleus	17.72	34.0
HORVU1Hr1G029800.11	Barley	plastid	18.53	33.75
TraesCS1A01G129500.2	Wheat	nucleus	19.1	33.67
AT3G15355.1	Thale cress	nucleus	23.59	33.66
HORVU1Hr1G085630.1	Barley	cytosol, nucleus	22.21	33.33
Zm00001d049101_P001	Maize	cytosol	5.87	32.69
Os01t0232500-01	Rice	nucleus	18.18	32.58
HORVU3Hr1G062370.3	Barley	golgi	21.86	32.26
TraesCS1B01G146400.2	Wheat	plastid	18.99	31.79
CDY20117	Canola	nucleus	21.86	31.77
Bra021105.1-P	Field mustard	nucleus	21.75	31.66
TraesCS1D01G125200.2	Wheat	plastid	18.87	31.48
PGSC0003DMT400064440	Potato	nucleus	26.35	31.46
CDY21838	Canola	cytosol	22.21	29.74
PGSC0003DMT400039746	Potato	nucleus	24.51	29.38
Solyc12g013820.1.1	Tomato	nucleus	24.28	28.44
Os01t0229900-01	Rice	mitochondrion	8.17	26.1
KRH20454	Soybean	cytosol, nucleus, peroxisome	19.33	18.01
KRH21442	Soybean	nucleus	18.99	17.95
KRH50043	Soybean	cytosol	18.76	17.58
KRH10881	Soybean	nucleus	18.3	17.21
KRG90672	Soybean	nucleus	18.18	14.06
Os03t0679300-01	Rice	mitochondrion	2.19	11.45
KRH36075	Soybean	nucleus	1.15	1.89

Protein Annotations

EntrezGene:100791144	Gene3D:3.10.110.10	MapMan:35.1	EMBL:ACUP02003944	EnsemblPlantsGene:GLYMA_06G243300	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	GO:GO:0031625	GO:GO:0061630	InterPro:IPR000608	InterPro:IPR016135
UniProt:K7KX39	EnsemblPlants:KRH55293	ProteinID:KRH55293	ProteinID:KRH55293.1	PFAM:PF00179	PFscan:PS50127
PANTHER:PTHR44273	PANTHER:PTHR44273:SF5	SMART:SM00212	SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_enzyme/RWD
UniParc:UPI0002948E65	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:40488478..40494883

Molecular Weight (calculated)

92704.2 Da

IEP (calculated)

5.460

GRAVY (calculated)

-0.266

Length

869 amino acids

Sequence
(BLAST)

001: MTPPVEPQHF KSEVFFDPNV IEITPPTLYN NPPNSTKQKE AILNPEVINV ESDDNSTELI LFGQRVRKGK EIQTTHQNME VCEDVMGKSL WTDKHSSSSD
101: SSNHKDDVEY YDFFSKDHTM TTSQPSLSLE PSGVQYSQTP QSKKKSNDSQ QRKQKLKLPL EIGSSTSFES GASHSGLLPT GGASDWGLLP AGGAPQAVGG
201: TLHLGLLPAG GMLPAAGAPQ AAGGTLHWGL LPAGGMPPAG GTPDWGMLPA AGAPQAAGGT LHWGLLPAGG MPPAGATPDW GLLSTGGTPQ VVGGTPHWGL
301: PPAGGISPAS GTPDWGLLSA GGTPQAVGGT TYWGLPPAGG APEWGLPSTV PMMTLYSPYH SNFVGPSYHH PGAESINQMW STNAHHLQAI PNYNYPHPYS
401: YTYDYNYTAP VVHHYHVPPA QLFHNSLVQN SVGDENNGAT TNSTVATISD EAREEILVKF RNFKQFDVVE DVSDHHFVNA DSSMQQHSKN WAKRIQGEWK
501: SLEKDLPDSI FVRVYESRID LLRAVIIAAE GTPYHDGLFF FDVYFPSGYP HVPPNVHYHS GGLRLNPNLY NCGKVCLSLL NTWTGHQNEQ WISGVSTILQ
601: VLVSIQGLIL VAKPFFNEPG YAHLNGSQYG EISSLRYNED SFILSLRTMM YIMKRPPKNF EDFVVGHFCR RAHDILETCK AYIDGAQVGC VVKGGAQDVD
701: QGDNSSSIQF RTSLAAVVHM LIKEFTQIGA KDCDQVFPST AAGNPSGEML TAAGNPSLVM LTEAGNPLGE MLTAAGNLSG VMPAAGGNPS IVMLGNPSVE
801: MPTAAGNLSG IMSAAVENPS VEMPGNLSGV MPTTVGNPSV EMLGNQSGVM MTAAGNPFTV EMPDSAAIP

Best Arabidopsis Sequence Match ( AT3G15355.1 )
(BLAST)

001: MEPNVVEIAT PPAASCSRIR TPTKAETPEV IDVEEYDLQN GGVPNGNNVD YKNKGKAIDF DSMSYGDYGE EDEYAVGSPG DDYGYPESSP LSNSLLDPES
101: LIYEDDENYS EQYDFEMEAE PDNYSMYQDL FDGKDIPTGV EVSMDWFPNS ADKESASSSK SSHANNGNNS SKKATKASGI HSQFSSDMET PVAQPWNALP
201: HKAEGVIPNS AYALPQNSKA FQPPYAVHYS ALKTAFSNYL QPQTPDTVLG EAPAPAAGSS GLLPPNTPGF KSNAARFKEE PPILPPDDSR VKRNMEDYLG
301: LYLFFKRFDI VEDFSDHHYA SKGTTSKQHS KDWAKRIQDE WRILEKDLPE MIFVRAYESR MDLLRAVIIG AQGTPYHDGL FFFDIFFPDT YPSTPPIVHY
401: HSGGLRINPN LYNCGKVCLS LLGTWSGNQR EKWIPNTSTM LQVLVSIQGL ILNQKPYFNE PGYERSAGSA HGESTSKAYS ENTFILSLKT MVYTMRRPPK
501: YFEDFAYGHF FSCAHDVLKA CNAYRNGATP GYLVKGAPDV EENSAGMSSL KFRTDVATFV ETVLLKEFIL LGVLGLEPEE EEKTPETIIV AESSKCTRSR
601: SKRDRVSSS

Arabidopsis Description

UBC25Probable ubiquitin-conjugating enzyme E2 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUQ5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.