CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0232500-01	Rice	nucleus, plastid	71.96	70.88
HORVU1Hr1G029800.11	Barley	plastid	72.17	69.6
TraesCS1A01G129500.2	Wheat	nucleus	73.7	68.76
TraesCS5D01G272300.1	Wheat	cytosol, nucleus, plastid	50.22	67.54
TraesCS1B01G146400.2	Wheat	plastid	74.57	66.09
TraesCS1D01G125200.2	Wheat	plastid	74.78	66.03
TraesCS5D01G272400.1	Wheat	nucleus	62.61	63.58
TraesCS5B01G264000.1	Wheat	nucleus	59.57	60.49
KXG31481	Sorghum	nucleus	58.91	59.04
CDY30673	Canola	nucleus	22.39	56.91
CDY51802	Canola	cytosol	21.96	49.27
Bra036393.1-P	Field mustard	cytosol, extracellular	8.48	45.88
AT1G53023.1	Thale cress	cytosol	30.43	44.3
KXG31477	Sorghum	mitochondrion, plastid	35.0	43.75
KRH26136	Soybean	cytosol	28.48	43.09
GSMUA_Achr10P...	Banana	nucleus	43.91	42.44
Bra041020.1-P	Field mustard	plastid	30.0	41.95
Bra038095.1-P	Field mustard	cytosol, nucleus, peroxisome	29.57	41.85
CDY25884	Canola	plastid	29.78	41.39
CDY25883	Canola	cytosol	25.43	41.34
KRH58633	Soybean	cytosol, nucleus	39.13	40.18
PGSC0003DMT400047166	Potato	nucleus	40.22	40.04
Solyc07g053960.2.1	Tomato	nucleus	39.35	39.09
EES19929	Sorghum	nucleus	42.83	38.86
KRH42541	Soybean	nucleus	39.57	38.4
KRH26135	Soybean	cytosol	31.96	37.79
VIT_12s0028g03630.t01	Wine grape	nucleus	40.0	36.01
KXG33109	Sorghum	nucleus	41.09	35.39
CDX71178	Canola	cytosol	32.17	34.34
CDX75824	Canola	cytosol	34.78	34.26
CDX82439	Canola	cytosol	33.7	33.77
Bra030965.1-P	Field mustard	nucleus	33.7	32.98
CDX98552	Canola	cytosol	38.91	32.9
CDY55875	Canola	nucleus	30.43	32.79
Bra027252.1-P	Field mustard	cytosol	39.13	32.73
CDX97660	Canola	cytosol	39.13	32.61
CDY47562	Canola	cytosol	33.7	32.16
CDY02528	Canola	cytosol	33.48	32.08
Bra001591.1-P	Field mustard	nucleus	36.74	31.35
Bra040814.1-P	Field mustard	cytosol	31.3	30.97
CDY25886	Canola	cytosol	31.3	30.97
CDY24125	Canola	cytosol	32.61	30.86
Bra019007.1-P	Field mustard	cytosol	32.83	30.38
CDY26018	Canola	cytosol	33.26	30.12
CDY20117	Canola	nucleus	38.48	29.6
Bra021105.1-P	Field mustard	nucleus	38.26	29.48
AT1G53025.2	Thale cress	nucleus	35.43	29.26
AT3G15355.1	Thale cress	nucleus	38.04	28.74
CDY21838	Canola	cytosol	38.26	27.12
KRH27240	Soybean	cytosol	40.0	26.14
Solyc10g007000.2.1	Tomato	cytosol	37.39	25.79
KRH22096	Soybean	cytosol	40.43	25.73
PGSC0003DMT400039746	Potato	nucleus	38.7	24.55
VIT_19s0014g02760.t01	Wine grape	nucleus	39.78	24.4
PGSC0003DMT400064440	Potato	nucleus	37.83	23.9
Solyc12g013820.1.1	Tomato	nucleus	38.04	23.58
KRH55293	Soybean	cytosol, peroxisome, plastid	34.78	18.41
EES19930	Sorghum	cytosol	34.57	18.25
OQU79703	Sorghum	cytosol	29.13	15.53
EES02568	Sorghum	nucleus	34.13	14.2
OQU84284	Sorghum	mitochondrion, nucleus, plasma membrane, plastid	23.7	12.85

Protein Annotations

Gene3D:3.10.110.10	MapMan:35.1	EntrezGene:8066641	UniProt:C5YV69	ncoils:Coil	EnsemblPlants:EES17914
ProteinID:EES17914	ProteinID:EES17914.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031625
GO:GO:0061630	InterPro:IPR000608	InterPro:IPR016135	PFAM:PF00179	PFscan:PS50127	PANTHER:PTHR44273
PANTHER:PTHR44273:SF3	SMART:SM00212	EnsemblPlantsGene:SORBI_3009G086200	SUPFAM:SSF54495	unigene:Sbi.17476	InterPro:UBQ-conjugat_E2
InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI0001A88A58	RefSeq:XP_002439484.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:+:14593974..14599894

Molecular Weight (calculated)

51732.9 Da

IEP (calculated)

4.792

GRAVY (calculated)

-0.718

Length

460 amino acids

Sequence
(BLAST)

001: MDAAGYPHMQ GSGSAASSSC RAADYSAGWD SAQQQKRQRC QGSSSNDQVG SSTENNSLEA PGSELKYDYG KNEEEDYYFE DEDDGCYDED DEGSDYELET
101: ADYNQLLADK FDHLDLPPGV EAAVPWLQKV ERDGPGKFKS MSEIEEEIAK KYNFFKQFDT VEDFIDHKYA KISVGNARKE WAKRIQHEWS LLEKDLPALI
201: YVRASENRMD LLRAVMIGPQ GTPYHDGLFF FDAHFPPSYP AIPPVVHYHA GGLRLNPNLY ACGKVCLSLL GTWQGQSCEK WNPAQSTMLQ VLISIQALVL
301: NEKPFYNEPG YERYANSAEG LAYALDYNDT AFQYSCRTML YSLRKPPQHF EDLVAGHFRE RGHAILAACK YYMEGHEVGS KVPEEDEDTK GCQNGEGSSS
401: STTAKPQQNK PALRTNRNRN ASFKTNLGVL FEELLMEFNV KGANTARFRA EKLKNQLAAA

Best Arabidopsis Sequence Match ( AT3G15355.1 )
(BLAST)

001: MEPNVVEIAT PPAASCSRIR TPTKAETPEV IDVEEYDLQN GGVPNGNNVD YKNKGKAIDF DSMSYGDYGE EDEYAVGSPG DDYGYPESSP LSNSLLDPES
101: LIYEDDENYS EQYDFEMEAE PDNYSMYQDL FDGKDIPTGV EVSMDWFPNS ADKESASSSK SSHANNGNNS SKKATKASGI HSQFSSDMET PVAQPWNALP
201: HKAEGVIPNS AYALPQNSKA FQPPYAVHYS ALKTAFSNYL QPQTPDTVLG EAPAPAAGSS GLLPPNTPGF KSNAARFKEE PPILPPDDSR VKRNMEDYLG
301: LYLFFKRFDI VEDFSDHHYA SKGTTSKQHS KDWAKRIQDE WRILEKDLPE MIFVRAYESR MDLLRAVIIG AQGTPYHDGL FFFDIFFPDT YPSTPPIVHY
401: HSGGLRINPN LYNCGKVCLS LLGTWSGNQR EKWIPNTSTM LQVLVSIQGL ILNQKPYFNE PGYERSAGSA HGESTSKAYS ENTFILSLKT MVYTMRRPPK
501: YFEDFAYGHF FSCAHDVLKA CNAYRNGATP GYLVKGAPDV EENSAGMSSL KFRTDVATFV ETVLLKEFIL LGVLGLEPEE EEKTPETIIV AESSKCTRSR
601: SKRDRVSSS

Arabidopsis Description

UBC25Probable ubiquitin-conjugating enzyme E2 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUQ5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.