Factsheet for Os05t0232500-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G029800.11	Barley	plastid	75.37	73.79
TraesCS1A01G129500.2	Wheat	nucleus	76.66	72.62
EES17914	Sorghum	plastid	70.88	71.96
TraesCS5D01G272300.1	Wheat	cytosol, nucleus, plastid	51.82	70.76
TraesCS1B01G146400.2	Wheat	plastid	77.73	69.94
TraesCS1D01G125200.2	Wheat	plastid	77.73	69.67
TraesCS5D01G272400.1	Wheat	nucleus	62.74	64.68
TraesCS5B01G264000.1	Wheat	nucleus	61.24	63.13
Os01t0232500-01	Rice	nucleus	64.88	62.47
CDY30673	Canola	nucleus	20.98	54.14
Os01t0677500-00	Rice	cytosol	37.9	51.3
CDY51802	Canola	cytosol	22.48	51.22
KRH26136	Soybean	cytosol	29.34	45.07
Bra036393.1-P	Field mustard	cytosol, extracellular	8.14	44.71
AT1G53023.1	Thale cress	cytosol	29.76	43.99
CDY25883	Canola	cytosol	26.55	43.82
GSMUA_Achr10P...	Banana	nucleus	44.33	43.49
Bra038095.1-P	Field mustard	cytosol, nucleus, peroxisome	29.98	43.08
Os09t0294300-01	Rice	nucleus	39.19	42.26
CDY25884	Canola	plastid	29.76	41.99
Bra041020.1-P	Field mustard	plastid	29.34	41.64
Os05t0557600-01	Rice	cytosol	44.33	40.67
PGSC0003DMT400047166	Potato	nucleus	40.04	40.48
Os05t0153132-00	Rice	cytosol	22.7	40.46
KRH58633	Soybean	cytosol, nucleus	38.54	40.18
Solyc07g053960.2.1	Tomato	nucleus	39.61	39.96
KRH26135	Soybean	cytosol	33.19	39.85
KRH42541	Soybean	nucleus	38.54	37.97
VIT_12s0028g03630.t01	Wine grape	nucleus	39.61	36.2
Os01t0233900-01	Rice	mitochondrion	35.55	35.7
CDX71178	Canola	cytosol	32.12	34.8
CDX82439	Canola	cytosol	33.19	33.77
CDX75824	Canola	cytosol	33.62	33.62
Bra030965.1-P	Field mustard	nucleus	33.62	33.4
CDY55875	Canola	nucleus	30.41	33.26
CDY47562	Canola	cytosol	33.4	32.37
CDY02528	Canola	cytosol	33.19	32.29
CDX97660	Canola	cytosol	38.12	32.25
Bra027252.1-P	Field mustard	cytosol	37.9	32.18
CDX98552	Canola	cytosol	37.26	31.99
CDY24125	Canola	cytosol	32.76	31.48
Bra019007.1-P	Field mustard	cytosol	33.4	31.39
Bra001591.1-P	Field mustard	nucleus	36.19	31.35
CDY25886	Canola	cytosol	31.05	31.18
Bra040814.1-P	Field mustard	cytosol	31.05	31.18
CDY26018	Canola	cytosol	33.83	31.1
AT1G53025.2	Thale cress	nucleus	35.76	29.98
AT3G15355.1	Thale cress	nucleus	38.12	29.23
Bra021105.1-P	Field mustard	nucleus	36.83	28.81
CDY20117	Canola	nucleus	36.83	28.76
Os01t0229900-01	Rice	mitochondrion	15.63	26.84
CDY21838	Canola	cytosol	36.62	26.35
KRH27240	Soybean	cytosol	39.61	26.28
KRH22096	Soybean	cytosol	40.04	25.86
Solyc10g007000.2.1	Tomato	cytosol	36.83	25.79
VIT_19s0014g02760.t01	Wine grape	nucleus	39.4	24.53
PGSC0003DMT400039746	Potato	nucleus	37.9	24.41
PGSC0003DMT400064440	Potato	nucleus	37.26	23.9
Solyc12g013820.1.1	Tomato	nucleus	37.47	23.58
KRH55293	Soybean	cytosol, peroxisome, plastid	35.55	19.1
Os05t0557700-01	Rice	cytosol	33.4	17.81
Os01t0125900-01	Rice	extracellular, plasma membrane	34.69	15.24
Os03t0679300-01	Rice	mitochondrion	4.28	12.05

Protein Annotations

Gene3D:3.10.110.10	MapMan:35.1	EntrezGene:4338168	EMBL:AK069430	ProteinID:BAF16896.1	ProteinID:BAS92926.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031625	GO:GO:0061630	InterPro:IPR000608
InterPro:IPR016135	EnsemblPlantsGene:Os05g0232500	EnsemblPlants:Os05t0232500-01	PFAM:PF00179	PFscan:PS50127	PANTHER:PTHR44273
PANTHER:PTHR44273:SF3	UniProt:Q0DJS7	SMART:SM00212	SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_enzyme/RWD
UniParc:UPI0000E123C0	RefSeq:XP_015637327.1	SEG:seg	:	:	:

Description

UBIQUITIN-CONJUGATING ENZYME 43Ubiquitin-conjugating enzyme/RWD-like domain containing protein. (Os05t0232500-01)

Coordinates

chr5:+:8034111..8039392

Molecular Weight (calculated)

51949.9 Da

IEP (calculated)

4.531

GRAVY (calculated)

-0.669

Length

467 amino acids

Sequence
(BLAST)

001: MDAAGYPKMQ GGGASSSSSS SASCRAADAA VWDAVQQQKR QRCQGSSSND QVGLSTENNS FQAPEPELQN SDCVEDEEED YYLYDEDDVC YDDDGDYEFD
101: ETDFNQQLAD KFDGLDLPPG VEATVPWLQK KDIADGPSTF KSMAELDADI TKKYEFFKQF DVVENFSDHH YADKPVGKTG KDWTKRIQYD WKLLEKDLPA
201: SIYVRVSENR MDLLRAVIIG PQGTPYHDGL FFFDAQFTST YPSTPPVVYY HSGGLRLNPN LYACGKVCLS LLGTWSGSGC EKWNSAHSTM LQVLVSIQAL
301: VLNENPYFNE PGYETYANSA TGQKSAMDYN DTTFQYSCRT MLYSLRRSPQ HFDALVAGHF RHRGHAILAA CKYYMEGHKV GSVVPNEDEE DAKQQDDTDA
401: GGSGSSSGAK PQPEKPDLCK GRAASFKTNM AVLFEELLME FNVKGADTKK FCDEKLKKNQ QAAAAAR

Best Arabidopsis Sequence Match ( AT1G53025.1 )
(BLAST)

001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR

Arabidopsis Description

Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.