Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82439 | Canola | cytosol | 79.87 | 81.26 |
| CDY30673 | Canola | nucleus | 25.7 | 66.3 |
| CDY51802 | Canola | cytosol | 27.19 | 61.95 |
| HORVU3Hr1G109730.1 | Barley | cytosol | 19.49 | 56.52 |
| CDX98552 | Canola | cytosol | 65.31 | 56.07 |
| CDY20117 | Canola | nucleus | 71.52 | 55.85 |
| CDX97660 | Canola | cytosol | 65.74 | 55.62 |
| CDY25883 | Canola | cytosol | 31.91 | 52.65 |
| CDY21838 | Canola | cytosol | 71.73 | 51.62 |
| CDY25884 | Canola | plastid | 35.76 | 50.45 |
| AT3G15355.1 | Thale cress | nucleus | 62.95 | 48.28 |
| HORVU1Hr1G090980.2 | Barley | cytosol | 20.34 | 47.5 |
| GSMUA_Achr7P25120_001 | Banana | cytosol | 29.98 | 46.82 |
| CDY55875 | Canola | nucleus | 42.18 | 46.14 |
| CDX71178 | Canola | cytosol | 41.76 | 45.24 |
| KRH26136 | Soybean | cytosol | 28.48 | 43.75 |
| Zm00001d009007_P001 | Maize | cytosol | 22.7 | 43.27 |
| CDY25886 | Canola | cytosol | 43.04 | 43.23 |
| CDY26018 | Canola | cytosol | 46.47 | 42.72 |
| CDY02528 | Canola | cytosol | 43.9 | 42.71 |
| CDY47562 | Canola | cytosol | 43.9 | 42.53 |
| Os01t0677500-00 | Rice | cytosol | 31.26 | 42.32 |
| CDY24125 | Canola | cytosol | 43.25 | 41.56 |
| TraesCS5D01G272300.1 | Wheat | cytosol, nucleus, plastid | 28.48 | 38.89 |
| Zm00001d009513_P003 | Maize | cytosol | 32.76 | 38.54 |
| KRH26135 | Soybean | cytosol | 31.91 | 38.3 |
| Zm00001d015028_P001 | Maize | cytosol, mitochondrion, nucleus | 16.49 | 38.12 |
| Zm00001d051483_P001 | Maize | mitochondrion, nucleus, peroxisome | 16.49 | 38.12 |
| KXG31477 | Sorghum | mitochondrion, plastid | 29.55 | 37.5 |
| TraesCS3B01G183600.1 | Wheat | mitochondrion, nucleus | 30.19 | 37.4 |
| TraesCS3D01G164800.2 | Wheat | mitochondrion, nucleus, plastid | 30.19 | 37.3 |
| TraesCS3A01G157200.1 | Wheat | mitochondrion, nucleus, plastid | 29.76 | 37.17 |
| Zm00001d039280_P005 | Maize | mitochondrion, nucleus, plastid | 29.12 | 36.46 |
| GSMUA_Achr6P22670_001 | Banana | cytosol | 35.55 | 36.24 |
| HORVU3Hr1G031950.4 | Barley | mitochondrion | 28.27 | 35.97 |
| TraesCS3A01G157300.2 | Wheat | nucleus | 28.27 | 35.97 |
| TraesCS3B01G183800.2 | Wheat | nucleus | 28.05 | 35.6 |
| TraesCS3D01G164900.3 | Wheat | nucleus | 28.05 | 35.6 |
| Os09t0294300-01 | Rice | nucleus | 32.55 | 35.1 |
| Zm00001d039285_P001 | Maize | cytosol, plastid | 33.62 | 34.89 |
| EES17914 | Sorghum | plastid | 34.26 | 34.78 |
| TraesCS5D01G272400.1 | Wheat | nucleus | 33.4 | 34.44 |
| TraesCS3B01G183000.1 | Wheat | nucleus, plastid | 33.19 | 34.29 |
| HORVU3Hr1G031890.10 | Barley | cytosol, nucleus | 29.12 | 34.17 |
| TraesCS3D01G164200.1 | Wheat | nucleus, plastid | 32.98 | 34.15 |
| TraesCS3A01G156300.1 | Wheat | nucleus, plastid | 33.19 | 34.14 |
| Os05t0557600-01 | Rice | cytosol | 37.05 | 33.99 |
| HORVU2Hr1G062530.3 | Barley | cytosol | 9.42 | 33.85 |
| Zm00001d047959_P001 | Maize | cytosol | 16.06 | 33.63 |
| Os05t0232500-01 | Rice | nucleus, plastid | 33.62 | 33.62 |
| GSMUA_Achr10P... | Banana | nucleus | 34.26 | 33.61 |
| KXG31481 | Sorghum | nucleus | 32.98 | 33.55 |
| TraesCS5B01G264000.1 | Wheat | nucleus | 32.33 | 33.33 |
| HORVU5Hr1G000190.3 | Barley | cytosol | 9.21 | 33.08 |
| HORVU1Hr1G029800.11 | Barley | plastid | 33.62 | 32.91 |
| GSMUA_Achr9P00210_001 | Banana | plastid | 37.47 | 32.59 |
| Os01t0232500-01 | Rice | nucleus | 33.4 | 32.16 |
| TraesCS1A01G129500.2 | Wheat | nucleus | 33.83 | 32.05 |
| HORVU3Hr1G031730.4 | Barley | nucleus, plastid | 32.76 | 31.88 |
| EES19929 | Sorghum | nucleus | 33.83 | 31.16 |
| TraesCS3D01G269000.1 | Wheat | nucleus | 34.9 | 30.75 |
| TraesCS1B01G146400.2 | Wheat | plastid | 34.05 | 30.64 |
| TraesCS3A01G269200.1 | Wheat | nucleus | 34.69 | 30.57 |
| TraesCS1D01G125200.2 | Wheat | plastid | 34.05 | 30.52 |
| TraesCS3B01G303300.1 | Wheat | nucleus | 34.48 | 30.38 |
| TraesCS1B01G415500.2 | Wheat | nucleus | 36.19 | 30.12 |
| KXG33109 | Sorghum | nucleus | 34.26 | 29.96 |
| TraesCS1A01G388000.1 | Wheat | cytosol, mitochondrion, nucleus | 35.97 | 29.95 |
| Os01t0233900-01 | Rice | mitochondrion | 29.76 | 29.89 |
| TraesCS1D01G396000.2 | Wheat | cytosol, mitochondrion, nucleus | 35.76 | 29.87 |
| Zm00001d049101_P001 | Maize | cytosol | 9.85 | 29.49 |
| HORVU1Hr1G085630.1 | Barley | cytosol, nucleus | 36.19 | 29.19 |
| CDX72600 | Canola | cytosol | 7.28 | 28.33 |
| KRH27240 | Soybean | cytosol | 41.97 | 27.84 |
| HORVU3Hr1G062370.3 | Barley | golgi | 34.69 | 27.5 |
| Os01t0229900-01 | Rice | mitochondrion | 15.63 | 26.84 |
| VIT_19s0014g02760.t01 | Wine grape | nucleus | 43.04 | 26.8 |
| Solyc10g007000.2.1 | Tomato | cytosol | 38.12 | 26.69 |
| KRH22096 | Soybean | cytosol | 40.9 | 26.42 |
| PGSC0003DMT400064440 | Potato | nucleus | 38.97 | 25.0 |
| PGSC0003DMT400039746 | Potato | nucleus | 37.47 | 24.14 |
| Solyc12g013820.1.1 | Tomato | nucleus | 38.33 | 24.12 |
| CDY42703 | Canola | cytosol, mitochondrion, nucleus | 28.69 | 19.94 |
| KRH55293 | Soybean | cytosol, peroxisome, plastid | 37.05 | 19.91 |
| CDY53783 | Canola | nucleus | 30.41 | 16.77 |
| CDY37693 | Canola | nucleus | 30.19 | 16.3 |
| CDX89761 | Canola | nucleus | 31.05 | 13.85 |
| Os03t0679300-01 | Rice | mitochondrion | 4.5 | 12.65 |
| CDY02226 | Canola | endoplasmic reticulum, extracellular | 26.77 | 10.31 |
Protein Annotations
| EnsemblPlants:CDX75824 | EnsemblPlantsGene:GSBRNA2T00123784001 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44273 | PANTHER:PTHR44273:SF5 | PFAM:PF00179 | PFscan:PS50127 | ProteinID:CDX75824 |
| ProteinID:CDX75824.1 | SEG:seg | SMART:SM00212 | SUPFAM:SSF54495 | UniParc:UPI0004EE3BCA | MapMan:35.1 |
Description
BnaC03g39070D
Coordinates
chrLK031805:+:942013..945398
Molecular Weight (calculated)
52585.3 Da
IEP (calculated)
4.758
GRAVY (calculated)
-0.630
Length
467 amino acids
Sequence
(BLAST)
(BLAST)
001: MPICDTQYMC RAGETIKTSV PLIGTTFCHP RHLRHQRSFN EAPEIVYTTL TPNKGTTPGA MQNGGVLDNN NVDNKNKGKA IQLGSLSEDD HQLEESASEG
101: YDTTHNDESD PGSSPQSDSL LDPDALIYED DSDQYGYEME LEEEEEEEAD EYVSKYQALF DAKEKELPAG VEVTMDWLPN SKSSGSNKSS LKRNMDDYLG
201: KFVFFKRFDI VEDLVDHQYT SRGTASKKHS KEWAKRIQEE WRTLENDLPE MIFVRAYESR MDLLRAVIIG ADGTPYHDGL FFFDIFFPDT YPSVPPVVHY
301: HSGGLRINPN LYNSGKVCLS LLGTWSGAAS QMWIPTKSTM LQVLVSIQKP YFNEPGHERM AGSPSGESLS KAYSENTFLL SLKTMVYNMR RPPKYFEDFS
401: YGHFFSCAHD VLKACNAYRN GAPVASLEFI LLGVLGLEPE EEDKPSETKV AESSRSKRPK RGGVSSY
101: YDTTHNDESD PGSSPQSDSL LDPDALIYED DSDQYGYEME LEEEEEEEAD EYVSKYQALF DAKEKELPAG VEVTMDWLPN SKSSGSNKSS LKRNMDDYLG
201: KFVFFKRFDI VEDLVDHQYT SRGTASKKHS KEWAKRIQEE WRTLENDLPE MIFVRAYESR MDLLRAVIIG ADGTPYHDGL FFFDIFFPDT YPSVPPVVHY
301: HSGGLRINPN LYNSGKVCLS LLGTWSGAAS QMWIPTKSTM LQVLVSIQKP YFNEPGHERM AGSPSGESLS KAYSENTFLL SLKTMVYNMR RPPKYFEDFS
401: YGHFFSCAHD VLKACNAYRN GAPVASLEFI LLGVLGLEPE EEDKPSETKV AESSRSKRPK RGGVSSY
001: MVEIKDSSNV RKLKEEFLRD FKRFDTVEDF SDHHYAAEGS PAKLSLWHLK FKGRPKNWVK DIQKEWKILD KNLPETIFVR ACESRIDLLR AVIIGAEGTP
101: YHDGLFFFDI QFPDTYPSVP PKVHYHSGGL RINPNLYKCG KVCLSLISTW TGKKREKWLP KESTMLQLLV SIQALILNEK PYYNEPGYEK SMGTPLGESY
201: SKDYSENVFV FSLKTMHFEE FVRSHFFVRS HDIVKACNAY KDGAPVGSID KGGVKKQTRQ RGSLKFRINV TSFMKTVVDE FVNLGAIREA NHRGEPNPTL
301: FSCFFFCYLE LIICSV
101: YHDGLFFFDI QFPDTYPSVP PKVHYHSGGL RINPNLYKCG KVCLSLISTW TGKKREKWLP KESTMLQLLV SIQALILNEK PYYNEPGYEK SMGTPLGESY
201: SKDYSENVFV FSLKTMHFEE FVRSHFFVRS HDIVKACNAY KDGAPVGSID KGGVKKQTRQ RGSLKFRINV TSFMKTVVDE FVNLGAIREA NHRGEPNPTL
301: FSCFFFCYLE LIICSV
Arabidopsis Description
UBC39Putative ubiquitin-conjugating enzyme E2 39 [Source:UniProtKB/Swiss-Prot;Acc:F4HPP7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.