Factsheet for HORVU3Hr1G031950.4

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G183800.2	Wheat	nucleus	94.28	94.02
TraesCS3D01G164900.3	Wheat	nucleus	93.19	92.93
TraesCS3A01G157300.2	Wheat	nucleus	92.64	92.64
HORVU3Hr1G109730.1	Barley	cytosol	33.52	76.4
HORVU1Hr1G090980.2	Barley	cytosol	38.42	70.5
HORVU3Hr1G031890.10	Barley	cytosol, nucleus	73.84	68.09
KXG31477	Sorghum	mitochondrion, plastid	67.85	67.66
Zm00001d039280_P005	Maize	mitochondrion, nucleus, plastid	64.31	63.27
HORVU2Hr1G062530.3	Barley	cytosol	22.34	63.08
HORVU5Hr1G000190.3	Barley	cytosol	21.8	61.54
Zm00001d051483_P001	Maize	mitochondrion, nucleus, peroxisome	33.24	60.4
Zm00001d015028_P001	Maize	cytosol, mitochondrion, nucleus	32.97	59.9
Zm00001d047959_P001	Maize	cytosol	34.6	56.95
Os01t0233900-01	Rice	mitochondrion	69.75	55.05
Zm00001d049101_P001	Maize	cytosol	22.62	53.21
CDY30673	Canola	nucleus	24.52	49.72
CDY51802	Canola	cytosol	26.7	47.8
Bra036393.1-P	Field mustard	cytosol, extracellular	10.9	47.06
AT1G53023.1	Thale cress	cytosol	35.69	41.46
KRH26136	Soybean	cytosol	33.24	40.13
CDY25883	Canola	cytosol	30.79	39.93
Bra038095.1-P	Field mustard	cytosol, nucleus, peroxisome	34.33	38.77
Bra041020.1-P	Field mustard	plastid	34.06	37.99
CDY25884	Canola	plastid	33.52	37.16
KRH26135	Soybean	cytosol	38.42	36.25
KRH58633	Soybean	cytosol, nucleus	39.78	32.59
GSMUA_Achr10P...	Banana	nucleus	41.96	32.35
PGSC0003DMT400047166	Potato	nucleus	40.05	31.82
Solyc07g053960.2.1	Tomato	nucleus	39.78	31.53
HORVU1Hr1G029800.11	Barley	plastid	40.87	31.45
KRH42541	Soybean	nucleus	40.6	31.43
CDY55875	Canola	nucleus	36.24	31.15
HORVU3Hr1G031730.4	Barley	nucleus, plastid	40.6	31.04
Bra030965.1-P	Field mustard	nucleus	38.15	29.79
CDX71178	Canola	cytosol	34.6	29.47
Bra040814.1-P	Field mustard	cytosol	37.06	29.25
CDY25886	Canola	cytosol	37.06	29.25
HORVU1Hr1G085630.1	Barley	cytosol, nucleus	46.05	29.19
CDY02528	Canola	cytosol	38.15	29.17
VIT_12s0028g03630.t01	Wine grape	nucleus	40.6	29.16
CDY47562	Canola	cytosol	38.15	29.05
CDY24125	Canola	cytosol	37.87	28.6
HORVU3Hr1G062370.3	Barley	golgi	45.78	28.52
CDX75824	Canola	cytosol	35.97	28.27
CDX82439	Canola	cytosol	35.15	28.1
Bra019007.1-P	Field mustard	cytosol	37.06	27.36
CDY26018	Canola	cytosol	36.78	26.57
CDX98552	Canola	cytosol	38.69	26.1
Bra001591.1-P	Field mustard	nucleus	37.6	25.6
CDX97660	Canola	cytosol	38.42	25.54
Bra027252.1-P	Field mustard	cytosol	38.15	25.45
AT1G53025.2	Thale cress	nucleus	37.87	24.96
AT3G15355.1	Thale cress	nucleus	38.69	23.32
Bra021105.1-P	Field mustard	nucleus	37.87	23.28
CDY20117	Canola	nucleus	37.87	23.24
KRH27240	Soybean	cytosol	42.23	22.02
KRH22096	Soybean	cytosol	43.05	21.85
CDY21838	Canola	cytosol	37.6	21.26
Solyc10g007000.2.1	Tomato	cytosol	38.42	21.14
VIT_19s0014g02760.t01	Wine grape	nucleus	42.51	20.8
PGSC0003DMT400039746	Potato	nucleus	38.42	19.45
PGSC0003DMT400064440	Potato	nucleus	38.15	19.23
Solyc12g013820.1.1	Tomato	nucleus	38.15	18.87
HORVU1Hr1G085570.2	Barley	cytosol	40.87	17.71
KRH55293	Soybean	cytosol, peroxisome, plastid	41.69	17.61
HORVU3Hr1G004520.2	Barley	nucleus	36.78	12.25

Protein Annotations

EnsemblPlants:HORVU3Hr1G031950.4	EnsemblPlantsGene:HORVU3Hr1G031950	Gene3D:3.10.110.10	InterPro:IPR000608	InterPro:IPR016135	InterPro:UBQ-conjugat_E2
InterPro:UBQ-conjugating_enzyme/RWD	PANTHER:PTHR44273	PANTHER:PTHR44273:SF1	PFAM:PF00179	PFscan:PS50127	SEG:seg
SMART:SM00212	SUPFAM:SSF54495	UniParc:UPI000B46325C	UniProt:A0A287KNH8	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr3H:-:161080458..161087768

Molecular Weight (calculated)

41072.4 Da

IEP (calculated)

9.039

GRAVY (calculated)

-0.373

Length

367 amino acids

Sequence
(BLAST)

001: MVLNKLLQLF GVGKNKKKDS KKKGKSINPV SQGAAPHSTL NILASNSLLD PCSSGAGTVL SLQKDEPECS SNISSMIKEV HGSENEDNKS FNQFDVVQDY
101: SDHHYAKTSP AKTSKDWAKT IQNEWKLLQR DLPESIYIRV YEDRIDLIRA AIVGPAGTPY HDGLFFFDVC FPPEYPRCPP KVHFHSSGLR LNPNLYESGK
201: VCLSLLNTWL GSGSEKWGKS NSTMLQVLVS IQGLVLNDKP YFNEPIIFSS KEKHSLGYNQ TTFVLTCKMM MYLLQKPPKH FETLIVCHFH ERERAILEAC
301: RAYGCGMVVG SSVKDGQTYL RNKCFAGFKK SLDAQTELLA KELAANRLRA LQLKREVPAA DKTMSIS

Best Arabidopsis Sequence Match ( AT1G53025.1 )
(BLAST)

001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR

Arabidopsis Description

Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.