Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47562 | Canola | cytosol | 98.12 | 97.72 |
| Bra030965.1-P | Field mustard | nucleus | 95.62 | 97.66 |
| CDY30673 | Canola | nucleus | 30.21 | 80.11 |
| CDY51802 | Canola | cytosol | 32.71 | 76.59 |
| CDY25883 | Canola | cytosol | 44.38 | 75.27 |
| CDY25884 | Canola | plastid | 49.79 | 72.21 |
| CDX71178 | Canola | cytosol | 64.58 | 71.93 |
| CDY55875 | Canola | nucleus | 63.96 | 71.9 |
| CDY26018 | Canola | cytosol | 75.0 | 70.87 |
| CDY24125 | Canola | cytosol | 69.79 | 68.93 |
| AT1G53023.1 | Thale cress | cytosol | 44.38 | 67.41 |
| CDY25886 | Canola | cytosol | 65.0 | 67.1 |
| AT1G53025.2 | Thale cress | nucleus | 72.5 | 62.48 |
| HORVU3Hr1G109730.1 | Barley | cytosol | 19.79 | 59.01 |
| HORVU1Hr1G090980.2 | Barley | cytosol | 22.92 | 55.0 |
| GSMUA_Achr7P25120_001 | Banana | cytosol | 30.21 | 48.49 |
| KRH26136 | Soybean | cytosol | 30.0 | 47.37 |
| Zm00001d009007_P001 | Maize | cytosol | 22.92 | 44.9 |
| CDX82439 | Canola | cytosol | 42.5 | 44.44 |
| CDX75824 | Canola | cytosol | 42.71 | 43.9 |
| Os01t0677500-00 | Rice | cytosol | 31.04 | 43.19 |
| Zm00001d051483_P001 | Maize | mitochondrion, nucleus, peroxisome | 17.92 | 42.57 |
| HORVU2Hr1G062530.3 | Barley | cytosol | 11.46 | 42.31 |
| TraesCS5D01G272300.1 | Wheat | cytosol, nucleus, plastid | 30.0 | 42.11 |
| Zm00001d015028_P001 | Maize | cytosol, mitochondrion, nucleus | 17.71 | 42.08 |
| HORVU5Hr1G000190.3 | Barley | cytosol | 11.25 | 41.54 |
| CDX98552 | Canola | cytosol | 46.88 | 41.36 |
| KRH26135 | Soybean | cytosol | 33.33 | 41.13 |
| KXG31477 | Sorghum | mitochondrion, plastid | 31.04 | 40.49 |
| CDX97660 | Canola | cytosol | 46.46 | 40.4 |
| TraesCS3A01G157200.1 | Wheat | mitochondrion, nucleus, plastid | 31.25 | 40.11 |
| TraesCS3B01G183600.1 | Wheat | mitochondrion, nucleus | 31.46 | 40.05 |
| TraesCS3D01G164800.2 | Wheat | mitochondrion, nucleus, plastid | 31.46 | 39.95 |
| Zm00001d039280_P005 | Maize | mitochondrion, nucleus, plastid | 30.21 | 38.87 |
| TraesCS3A01G157300.2 | Wheat | nucleus | 29.38 | 38.42 |
| TraesCS3B01G183800.2 | Wheat | nucleus | 29.38 | 38.32 |
| CDY20117 | Canola | nucleus | 47.71 | 38.29 |
| HORVU3Hr1G031890.10 | Barley | cytosol, nucleus | 31.67 | 38.19 |
| HORVU3Hr1G031950.4 | Barley | mitochondrion | 29.17 | 38.15 |
| Os09t0294300-01 | Rice | nucleus | 34.38 | 38.11 |
| TraesCS3D01G164900.3 | Wheat | nucleus | 28.96 | 37.77 |
| Zm00001d047959_P001 | Maize | cytosol | 17.29 | 37.22 |
| GSMUA_Achr6P22670_001 | Banana | cytosol | 34.79 | 36.46 |
| Zm00001d009513_P003 | Maize | cytosol | 29.58 | 35.77 |
| CDY21838 | Canola | cytosol | 47.92 | 35.44 |
| TraesCS3D01G164200.1 | Wheat | nucleus, plastid | 32.71 | 34.81 |
| Os05t0557600-01 | Rice | cytosol | 36.88 | 34.77 |
| Zm00001d039285_P001 | Maize | cytosol, plastid | 32.5 | 34.67 |
| TraesCS3A01G156300.1 | Wheat | nucleus, plastid | 32.71 | 34.58 |
| TraesCS3B01G183000.1 | Wheat | nucleus, plastid | 32.29 | 34.29 |
| EES19929 | Sorghum | nucleus | 36.04 | 34.12 |
| Zm00001d049101_P001 | Maize | cytosol | 11.04 | 33.97 |
| TraesCS5D01G272400.1 | Wheat | nucleus | 31.67 | 33.55 |
| EES17914 | Sorghum | plastid | 32.08 | 33.48 |
| GSMUA_Achr10P... | Banana | nucleus | 33.12 | 33.4 |
| Os05t0232500-01 | Rice | nucleus, plastid | 32.29 | 33.19 |
| KXG31481 | Sorghum | nucleus | 31.67 | 33.12 |
| TraesCS5B01G264000.1 | Wheat | nucleus | 31.25 | 33.11 |
| GSMUA_Achr9P00210_001 | Banana | plastid | 36.88 | 32.96 |
| HORVU1Hr1G029800.11 | Barley | plastid | 32.71 | 32.91 |
| TraesCS3D01G269000.1 | Wheat | nucleus | 36.25 | 32.83 |
| TraesCS3A01G269200.1 | Wheat | nucleus | 36.25 | 32.83 |
| TraesCS1A01G129500.2 | Wheat | nucleus | 33.54 | 32.66 |
| TraesCS3B01G303300.1 | Wheat | nucleus | 36.04 | 32.64 |
| Os01t0232500-01 | Rice | nucleus | 32.92 | 32.58 |
| Os01t0233900-01 | Rice | mitochondrion | 31.25 | 32.26 |
| HORVU3Hr1G031730.4 | Barley | nucleus, plastid | 32.08 | 32.08 |
| KXG33109 | Sorghum | nucleus | 35.62 | 32.02 |
| TraesCS1B01G415500.2 | Wheat | nucleus | 37.29 | 31.91 |
| TraesCS1D01G396000.2 | Wheat | cytosol, mitochondrion, nucleus | 36.88 | 31.66 |
| TraesCS1A01G388000.1 | Wheat | cytosol, mitochondrion, nucleus | 36.67 | 31.37 |
| KRH27240 | Soybean | cytosol | 45.42 | 30.97 |
| HORVU1Hr1G085630.1 | Barley | cytosol, nucleus | 37.29 | 30.92 |
| TraesCS1D01G125200.2 | Wheat | plastid | 33.54 | 30.9 |
| TraesCS1B01G146400.2 | Wheat | plastid | 33.33 | 30.83 |
| Solyc10g007000.2.1 | Tomato | cytosol | 41.67 | 29.98 |
| HORVU3Hr1G062370.3 | Barley | golgi | 36.67 | 29.88 |
| KRH22096 | Soybean | cytosol | 44.79 | 29.74 |
| VIT_19s0014g02760.t01 | Wine grape | nucleus | 46.04 | 29.47 |
| CDX72600 | Canola | cytosol | 7.29 | 29.17 |
| PGSC0003DMT400064440 | Potato | nucleus | 42.71 | 28.16 |
| PGSC0003DMT400039746 | Potato | nucleus | 38.33 | 25.38 |
| Solyc12g013820.1.1 | Tomato | nucleus | 38.33 | 24.8 |
| Os01t0229900-01 | Rice | mitochondrion | 13.12 | 23.16 |
| KRH55293 | Soybean | cytosol, peroxisome, plastid | 40.83 | 22.55 |
| CDY42703 | Canola | cytosol, mitochondrion, nucleus | 29.17 | 20.83 |
| CDY53783 | Canola | nucleus | 31.67 | 17.95 |
| CDY37693 | Canola | nucleus | 31.46 | 17.46 |
| CDX89761 | Canola | nucleus | 31.88 | 14.61 |
| CDY02226 | Canola | endoplasmic reticulum, extracellular | 27.5 | 10.89 |
| Os03t0679300-01 | Rice | mitochondrion | 3.33 | 9.64 |
Protein Annotations
| EnsemblPlants:CDY02528 | EnsemblPlantsGene:GSBRNA2T00114199001 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44273 | PANTHER:PTHR44273:SF5 | PFAM:PF00179 | PFscan:PS50127 | ProteinID:CDY02528 |
| ProteinID:CDY02528.1 | SEG:seg | SMART:SM00212 | SUPFAM:SSF54495 | UniParc:UPI0004EF3407 | MapMan:35.1 |
Description
BnaA08g01350D
Coordinates
chrLK031935:+:778717..781362
Molecular Weight (calculated)
53134.9 Da
IEP (calculated)
8.526
GRAVY (calculated)
-0.438
Length
480 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPDVMEIDP PPLASASRTR KPRKVNLEVI DVEQYHVDKM NKGKAIQDGN NPFSHVSNGV MPIDVDSYTV VLNDIPTGVK VVMSTTQPCE FQNYSSKGTS
101: KSSRNSSNPF LATPSVPQSL DFASLSASFA QNNQTVSSSA VQPVDSDASA SSSSAEAVPS SQANFLRDFK RFDTVEDFSD HHYLSKGKAS KQHSKTWLKK
201: VQADWKILEN DLPETIFVRA CESRMDLLRA VIIGAEGTPY HDGLFFFDIQ FPDSYPSAPP KVHYHSGGLR INPNLYNCGK VCLSLLGTWT GNKREKWLPQ
301: ESTMLQLLVS IQALILNQKP YFNEPGYEPT KGTVSGEAHS KVYSENVFIL SLKTMVYSMR KPPKHFEEFV HSHYFVRALD IAKACNAYKD GAPVGSILKG
401: GVQGIEETSQ SGSKKFRTDV AAFMKTVVGE FVKLGVKELE EKPKPPPVVD ANTESNTANR KRSRSSIKEF LANIGRCVFQ
101: KSSRNSSNPF LATPSVPQSL DFASLSASFA QNNQTVSSSA VQPVDSDASA SSSSAEAVPS SQANFLRDFK RFDTVEDFSD HHYLSKGKAS KQHSKTWLKK
201: VQADWKILEN DLPETIFVRA CESRMDLLRA VIIGAEGTPY HDGLFFFDIQ FPDSYPSAPP KVHYHSGGLR INPNLYNCGK VCLSLLGTWT GNKREKWLPQ
301: ESTMLQLLVS IQALILNQKP YFNEPGYEPT KGTVSGEAHS KVYSENVFIL SLKTMVYSMR KPPKHFEEFV HSHYFVRALD IAKACNAYKD GAPVGSILKG
401: GVQGIEETSQ SGSKKFRTDV AAFMKTVVGE FVKLGVKELE EKPKPPPVVD ANTESNTANR KRSRSSIKEF LANIGRCVFQ
001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSSIKEFLAN IGRCVFQ
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSSIKEFLAN IGRCVFQ
Arabidopsis Description
Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.