Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019007.1-P | Field mustard | cytosol | 95.88 | 93.76 |
| CDY26018 | Canola | cytosol | 94.03 | 89.96 |
| CDY30673 | Canola | nucleus | 29.22 | 78.45 |
| CDY51802 | Canola | cytosol | 32.51 | 77.07 |
| CDY55875 | Canola | nucleus | 65.84 | 74.94 |
| CDX71178 | Canola | cytosol | 64.2 | 72.39 |
| CDY25883 | Canola | cytosol | 41.77 | 71.73 |
| CDY25884 | Canola | plastid | 47.94 | 70.39 |
| CDY02528 | Canola | cytosol | 68.93 | 69.79 |
| CDY47562 | Canola | cytosol | 68.93 | 69.5 |
| CDY25886 | Canola | cytosol | 65.23 | 68.17 |
| AT1G53023.1 | Thale cress | cytosol | 44.03 | 67.72 |
| AT1G53025.2 | Thale cress | nucleus | 68.93 | 60.14 |
| HORVU3Hr1G109730.1 | Barley | cytosol | 19.34 | 58.39 |
| HORVU1Hr1G090980.2 | Barley | cytosol | 22.63 | 55.0 |
| GSMUA_Achr7P25120_001 | Banana | cytosol | 29.01 | 47.16 |
| KRH26136 | Soybean | cytosol | 28.81 | 46.05 |
| CDX82439 | Canola | cytosol | 43.21 | 45.75 |
| Zm00001d009007_P001 | Maize | cytosol | 22.63 | 44.9 |
| CDX98552 | Canola | cytosol | 48.56 | 43.38 |
| CDX75824 | Canola | cytosol | 41.56 | 43.25 |
| CDX97660 | Canola | cytosol | 48.97 | 43.12 |
| Os01t0677500-00 | Rice | cytosol | 29.84 | 42.03 |
| TraesCS5D01G272300.1 | Wheat | cytosol, nucleus, plastid | 29.42 | 41.81 |
| HORVU2Hr1G062530.3 | Barley | cytosol | 10.91 | 40.77 |
| Zm00001d051483_P001 | Maize | mitochondrion, nucleus, peroxisome | 16.67 | 40.1 |
| HORVU5Hr1G000190.3 | Barley | cytosol | 10.7 | 40.0 |
| CDY20117 | Canola | nucleus | 48.97 | 39.8 |
| TraesCS3D01G164800.2 | Wheat | mitochondrion, nucleus, plastid | 30.86 | 39.68 |
| Zm00001d015028_P001 | Maize | cytosol, mitochondrion, nucleus | 16.46 | 39.6 |
| KRH26135 | Soybean | cytosol | 31.69 | 39.59 |
| KXG31477 | Sorghum | mitochondrion, plastid | 29.63 | 39.13 |
| TraesCS3A01G157200.1 | Wheat | mitochondrion, nucleus, plastid | 30.04 | 39.04 |
| TraesCS3B01G183600.1 | Wheat | mitochondrion, nucleus | 30.25 | 38.99 |
| HORVU3Hr1G031950.4 | Barley | mitochondrion | 28.6 | 37.87 |
| TraesCS3B01G183800.2 | Wheat | nucleus | 28.6 | 37.77 |
| Os09t0294300-01 | Rice | nucleus | 33.54 | 37.64 |
| Zm00001d009513_P003 | Maize | cytosol | 30.66 | 37.53 |
| TraesCS3D01G164900.3 | Wheat | nucleus | 28.4 | 37.5 |
| HORVU3Hr1G031890.10 | Barley | cytosol, nucleus | 30.66 | 37.44 |
| TraesCS3A01G157300.2 | Wheat | nucleus | 28.19 | 37.33 |
| CDY21838 | Canola | cytosol | 49.59 | 37.13 |
| Zm00001d039280_P005 | Maize | mitochondrion, nucleus, plastid | 28.4 | 37.0 |
| GSMUA_Achr6P22670_001 | Banana | cytosol | 33.54 | 35.59 |
| Os05t0557600-01 | Rice | cytosol | 37.04 | 35.36 |
| Zm00001d047959_P001 | Maize | cytosol | 15.84 | 34.53 |
| EES19929 | Sorghum | nucleus | 36.01 | 34.52 |
| TraesCS3D01G164200.1 | Wheat | nucleus, plastid | 31.89 | 34.37 |
| TraesCS3B01G183000.1 | Wheat | nucleus, plastid | 31.69 | 34.07 |
| Zm00001d039285_P001 | Maize | cytosol, plastid | 31.28 | 33.78 |
| GSMUA_Achr9P00210_001 | Banana | plastid | 37.24 | 33.71 |
| TraesCS3A01G156300.1 | Wheat | nucleus, plastid | 31.48 | 33.7 |
| GSMUA_Achr10P... | Banana | nucleus | 32.92 | 33.61 |
| TraesCS5B01G264000.1 | Wheat | nucleus | 30.66 | 32.89 |
| TraesCS3D01G269000.1 | Wheat | nucleus | 35.8 | 32.83 |
| TraesCS3A01G269200.1 | Wheat | nucleus | 35.8 | 32.83 |
| Os05t0232500-01 | Rice | nucleus, plastid | 31.48 | 32.76 |
| KXG31481 | Sorghum | nucleus | 30.86 | 32.68 |
| TraesCS5D01G272400.1 | Wheat | nucleus | 30.45 | 32.67 |
| TraesCS3B01G303300.1 | Wheat | nucleus | 35.6 | 32.64 |
| EES17914 | Sorghum | plastid | 30.86 | 32.61 |
| KXG33109 | Sorghum | nucleus | 35.39 | 32.21 |
| Os01t0232500-01 | Rice | nucleus | 32.1 | 32.16 |
| HORVU1Hr1G029800.11 | Barley | plastid | 31.48 | 32.08 |
| Zm00001d049101_P001 | Maize | cytosol | 10.29 | 32.05 |
| HORVU3Hr1G031730.4 | Barley | nucleus, plastid | 31.48 | 31.88 |
| TraesCS1A01G129500.2 | Wheat | nucleus | 32.1 | 31.64 |
| Os01t0233900-01 | Rice | mitochondrion | 30.25 | 31.61 |
| TraesCS1B01G415500.2 | Wheat | nucleus | 36.42 | 31.55 |
| TraesCS1D01G396000.2 | Wheat | cytosol, mitochondrion, nucleus | 36.21 | 31.48 |
| TraesCS1A01G388000.1 | Wheat | cytosol, mitochondrion, nucleus | 35.8 | 31.02 |
| CDX72600 | Canola | cytosol | 7.61 | 30.83 |
| Solyc10g007000.2.1 | Tomato | cytosol | 41.98 | 30.58 |
| HORVU1Hr1G085630.1 | Barley | cytosol, nucleus | 36.42 | 30.57 |
| KRH27240 | Soybean | cytosol | 43.62 | 30.11 |
| TraesCS1B01G146400.2 | Wheat | plastid | 31.89 | 29.87 |
| TraesCS1D01G125200.2 | Wheat | plastid | 31.89 | 29.75 |
| HORVU3Hr1G062370.3 | Barley | golgi | 35.8 | 29.54 |
| KRH22096 | Soybean | cytosol | 43.83 | 29.46 |
| VIT_19s0014g02760.t01 | Wine grape | nucleus | 44.65 | 28.93 |
| PGSC0003DMT400064440 | Potato | nucleus | 42.8 | 28.57 |
| PGSC0003DMT400039746 | Potato | nucleus | 38.89 | 26.07 |
| Solyc12g013820.1.1 | Tomato | nucleus | 39.3 | 25.74 |
| Os01t0229900-01 | Rice | mitochondrion | 13.37 | 23.9 |
| KRH55293 | Soybean | cytosol, peroxisome, plastid | 39.3 | 21.98 |
| CDY42703 | Canola | cytosol, mitochondrion, nucleus | 28.19 | 20.39 |
| CDY53783 | Canola | nucleus | 31.69 | 18.18 |
| CDY37693 | Canola | nucleus | 31.48 | 17.69 |
| CDX89761 | Canola | nucleus | 31.28 | 14.52 |
| CDY02226 | Canola | endoplasmic reticulum, extracellular | 26.75 | 10.73 |
| Os03t0679300-01 | Rice | mitochondrion | 3.29 | 9.64 |
Protein Annotations
| EnsemblPlants:CDY24125 | EnsemblPlantsGene:GSBRNA2T00024679001 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44273 | PANTHER:PTHR44273:SF5 | PFAM:PF00179 | PFscan:PS50127 | ProteinID:CDY24125 |
| ProteinID:CDY24125.1 | SEG:seg | SMART:SM00212 | SUPFAM:SSF54495 | UniParc:UPI0004EEC2CA | UniProt:A0A078GCB9 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA06g01230DBnaA06g01230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GCB9]
Coordinates
chrLK032153:+:591478..593653
Molecular Weight (calculated)
54329.0 Da
IEP (calculated)
5.989
GRAVY (calculated)
-0.411
Length
486 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPDVVEIAP PLFPSGSRTR KPRKAVIPEV IDVEQYEFRN NNNNGVIDVK NKGKAIQDGS FYDHNLFDHV DIDDYSMFQA VLNSQDFPTD AEVFMSTTQP
101: WGFPNSKGSR SSSTEAVWNT SMETPQSWDF FSGLAFPQTS SYSSVSSSTT KVLPQAPDIV MVPAPPPSRS FKLDGSGSSS KTLAAEVVPS AQADFLKSFK
201: RFETVDDFSD HHYASKGKAS KQHSKNWVKK VQADWQILEN DLPETIFVRA CETRMDLLRA VIIGAEGTPY HDGLFFFDIQ FPDSYPSAPP KVHYHSGGLR
301: INPNLYNCGK VCLSLLGTWT GNSREKWLPK ESTMLQLLVS IQALILNQKP YFNEPGYEMT MGTPSGEAHS KVYSENVFIL SLRTMVYSMR NPPKHFEEYV
401: RSHYFVRALD IVKACNAYKD GAPVASIVKG GVQDIEETSE SGSKKFRNDV AAFMKTVVDE LVKLGETVRE ADQLGEPKPP FCFSCF
101: WGFPNSKGSR SSSTEAVWNT SMETPQSWDF FSGLAFPQTS SYSSVSSSTT KVLPQAPDIV MVPAPPPSRS FKLDGSGSSS KTLAAEVVPS AQADFLKSFK
201: RFETVDDFSD HHYASKGKAS KQHSKNWVKK VQADWQILEN DLPETIFVRA CETRMDLLRA VIIGAEGTPY HDGLFFFDIQ FPDSYPSAPP KVHYHSGGLR
301: INPNLYNCGK VCLSLLGTWT GNSREKWLPK ESTMLQLLVS IQALILNQKP YFNEPGYEMT MGTPSGEAHS KVYSENVFIL SLRTMVYSMR NPPKHFEEYV
401: RSHYFVRALD IVKACNAYKD GAPVASIVKG GVQDIEETSE SGSKKFRNDV AAFMKTVVDE LVKLGETVRE ADQLGEPKPP FCFSCF
001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
Arabidopsis Description
Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.