CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039285_P001	Maize	cytosol, plastid	85.4	87.11
Zm00001d009007_P001	Maize	cytosol	45.53	85.31
TraesCS3B01G183000.1	Wheat	nucleus, plastid	65.58	66.59
TraesCS3A01G156300.1	Wheat	nucleus, plastid	65.8	66.52
TraesCS3D01G164200.1	Wheat	nucleus, plastid	65.36	66.52
Os01t0232500-01	Rice	nucleus	68.19	64.54
HORVU3Hr1G031730.4	Barley	nucleus, plastid	64.71	61.88
EES17914	Sorghum	plastid	59.04	58.91
CDY30673	Canola	nucleus	22.44	56.91
CDY51802	Canola	cytosol	23.53	52.68
Bra036393.1-P	Field mustard	cytosol, extracellular	9.15	49.41
KXG31477	Sorghum	mitochondrion, plastid	36.38	45.38
KRH26136	Soybean	cytosol	29.85	45.07
CDY25883	Canola	cytosol	27.67	44.88
Bra038095.1-P	Field mustard	cytosol, nucleus, peroxisome	31.37	44.31
AT1G53023.1	Thale cress	cytosol	30.07	43.67
GSMUA_Achr10P...	Banana	nucleus	45.1	43.49
Bra041020.1-P	Field mustard	plastid	30.72	42.86
CDY25884	Canola	plastid	30.5	42.3
PGSC0003DMT400047166	Potato	nucleus	41.39	41.13
Solyc07g053960.2.1	Tomato	nucleus	41.18	40.82
KRH58633	Soybean	cytosol, nucleus	38.78	39.73
EES19929	Sorghum	nucleus	42.92	38.86
KRH26135	Soybean	cytosol	32.9	38.82
KXG33109	Sorghum	nucleus	43.14	37.08
KRH42541	Soybean	nucleus	38.13	36.92
VIT_12s0028g03630.t01	Wine grape	nucleus	39.65	35.62
CDX71178	Canola	cytosol	32.24	34.34
CDY55875	Canola	nucleus	31.59	33.96
CDX82439	Canola	cytosol	33.12	33.12
CDX75824	Canola	cytosol	33.55	32.98
Bra030965.1-P	Field mustard	nucleus	33.33	32.55
CDY02528	Canola	cytosol	33.12	31.67
Bra040814.1-P	Field mustard	cytosol	32.03	31.61
CDY25886	Canola	cytosol	32.03	31.61
Bra027252.1-P	Field mustard	cytosol	37.69	31.45
CDY47562	Canola	cytosol	32.9	31.33
CDX98552	Canola	cytosol	37.04	31.25
CDX97660	Canola	cytosol	37.47	31.16
CDY24125	Canola	cytosol	32.68	30.86
Bra019007.1-P	Field mustard	cytosol	33.12	30.58
Bra001591.1-P	Field mustard	nucleus	35.51	30.24
CDY26018	Canola	cytosol	33.33	30.12
AT1G53025.2	Thale cress	nucleus	35.08	28.9
Bra021105.1-P	Field mustard	nucleus	37.47	28.81
CDY20117	Canola	nucleus	37.04	28.43
AT3G15355.1	Thale cress	nucleus	36.17	27.26
Solyc10g007000.2.1	Tomato	cytosol	38.56	26.54
CDY21838	Canola	cytosol	37.25	26.35
KRH27240	Soybean	cytosol	39.65	25.85
KRH22096	Soybean	cytosol	40.09	25.45
VIT_19s0014g02760.t01	Wine grape	nucleus	40.74	24.93
PGSC0003DMT400064440	Potato	nucleus	39.0	24.59
PGSC0003DMT400039746	Potato	nucleus	38.34	24.28
Solyc12g013820.1.1	Tomato	nucleus	38.13	23.58
KRH55293	Soybean	cytosol, peroxisome, plastid	34.2	18.07
EES19930	Sorghum	cytosol	32.9	17.34
OQU79703	Sorghum	cytosol	30.28	16.11
EES02568	Sorghum	nucleus	34.42	14.29
OQU84284	Sorghum	mitochondrion, nucleus, plasma membrane, plastid	23.75	12.85

Protein Annotations

EnsemblPlants:KXG31481	EnsemblPlantsGene:SORBI_3003G006200	Gene3D:3.10.110.10	InterPro:IPR000608	InterPro:IPR016135	InterPro:UBQ-conjugat_E2
InterPro:UBQ-conjugating_enzyme/RWD	ncoils:Coil	PANTHER:PTHR44273	PANTHER:PTHR44273:SF7	PFAM:PF00179	PFscan:PS50127
ProteinID:KXG31481	ProteinID:KXG31481.1	SEG:seg	SMART:SM00212	SUPFAM:SSF54495	UniParc:UPI00081AB613
UniProt:A0A1B6Q0M2	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:541522..545079

Molecular Weight (calculated)

51602.3 Da

IEP (calculated)

4.532

GRAVY (calculated)

-0.831

Length

459 amino acids

Sequence
(BLAST)

001: MDTEYRALQQ GSSSSWCTAD ASSWGAAQQQ KRQRCQASSS DQVGSSSNSS LKISEPQQIQ EEEEEEEDYY MEDDCDDDGD GYDEDDYEFD EADFNQHLAD
101: KFDDLDLPPG VEATVPWLQK IAPKEEAKEP PKSNTADENE NKYTQFKQFD TVQNFSDHYY AKNSNGEPTR AWSKRVQHDW KLLEKDLPAY IYVRVAEDRM
201: DLLRAAIIGP KGTPYHDGLF FFDVHIPSNY PSGPPAVYYH SGGLRINPNL YDNGKVCLSL LGTWSGRGCE KWNPAQSTML QVLVSIQALI LNDKPYYNEP
301: GYESYANTPQ GERSSMDYND KTFLYSCRTM LYSLRRPPEH FADLVAGHFR VHGHIILAAC KHYMAGNDIG SVVPEDEDEE DSEYKSGDAG ASSSSSTAPK
401: PKPKPGLIKA IPPNGRSSGS FNPSLKVLYE DLLMEFNVKG ADTRKFIVEK LKKNQPAAT

Best Arabidopsis Sequence Match ( AT1G53025.1 )
(BLAST)

001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR

Arabidopsis Description

Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.