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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • plasma membrane 1
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
EpiLoc:plasma membrane
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY25886 Canola cytosol 100.0 100.0
Bra041020.1-P Field mustard plastid 57.42 81.16
Bra038095.1-P Field mustard cytosol, nucleus, peroxisome 56.34 80.62
Bra036393.1-P Field mustard cytosol, extracellular 14.19 77.65
Bra019007.1-P Field mustard cytosol 70.97 66.4
Bra030965.1-P Field mustard nucleus 66.88 66.17
AT1G53023.1 Thale cress cytosol 44.09 64.87
HORVU3Hr1G109730.1 Barley cytosol 20.0 57.76
HORVU1Hr1G090980.2 Barley cytosol 23.66 55.0
AT1G53025.2 Thale cress nucleus 65.38 54.58
GSMUA_Achr7P25120_001 Banana cytosol 31.4 48.83
KRH26136 Soybean cytosol 30.32 46.38
Zm00001d009007_P001 Maize cytosol 23.44 44.49
HORVU2Hr1G062530.3 Barley cytosol 11.61 41.54
Zm00001d051483_P001 Maize mitochondrion, nucleus, peroxisome 17.85 41.09
HORVU5Hr1G000190.3 Barley cytosol 11.4 40.77
Zm00001d015028_P001 Maize cytosol, mitochondrion, nucleus 17.63 40.59
Bra001591.1-P Field mustard nucleus 46.88 40.45
Os01t0677500-00 Rice cytosol 29.68 40.0
KRH26135 Soybean cytosol 33.33 39.85
TraesCS5D01G272300.1 Wheat cytosol, nucleus, plastid 29.25 39.77
Bra027252.1-P Field mustard cytosol 46.88 39.64
TraesCS3A01G157200.1 Wheat mitochondrion, nucleus, plastid 31.4 39.04
TraesCS3B01G183600.1 Wheat mitochondrion, nucleus 31.61 38.99
TraesCS3D01G164800.2 Wheat mitochondrion, nucleus, plastid 31.4 38.62
KXG31477 Sorghum mitochondrion, plastid 30.32 38.32
TraesCS3B01G183800.2 Wheat nucleus 29.46 37.23
Bra021105.1-P Field mustard nucleus 47.74 37.19
Os09t0294300-01 Rice nucleus 34.62 37.18
HORVU3Hr1G031950.4 Barley mitochondrion 29.25 37.06
Zm00001d039280_P005 Maize mitochondrion, nucleus, plastid 29.68 37.0
HORVU3Hr1G031890.10 Barley cytosol, nucleus 31.61 36.93
TraesCS3A01G157300.2 Wheat nucleus 29.03 36.78
TraesCS3D01G164900.3 Wheat nucleus 29.03 36.68
Zm00001d047959_P001 Maize cytosol 17.2 35.87
Zm00001d009513_P003 Maize cytosol 30.32 35.52
GSMUA_Achr6P22670_001 Banana cytosol 33.12 33.62
TraesCS3D01G164200.1 Wheat nucleus, plastid 32.47 33.48
TraesCS3A01G156300.1 Wheat nucleus, plastid 32.47 33.26
TraesCS3B01G183000.1 Wheat nucleus, plastid 32.04 32.96
Os05t0557600-01 Rice cytosol 35.91 32.81
Zm00001d039285_P001 Maize cytosol, plastid 31.4 32.44
EES19929 Sorghum nucleus 35.27 32.35
Zm00001d049101_P001 Maize cytosol 10.75 32.05
KXG31481 Sorghum nucleus 31.61 32.03
Os01t0233900-01 Rice mitochondrion 31.83 31.83
Os01t0232500-01 Rice nucleus 32.9 31.55
GSMUA_Achr10P... Banana nucleus 32.26 31.51
GSMUA_Achr9P00210_001 Banana plastid 36.34 31.47
EES17914 Sorghum plastid 30.97 31.3
TraesCS5D01G272400.1 Wheat nucleus 30.32 31.13
Os05t0232500-01 Rice nucleus, plastid 31.18 31.05
TraesCS5B01G264000.1 Wheat nucleus 29.89 30.68
HORVU3Hr1G031730.4 Barley nucleus, plastid 31.61 30.62
TraesCS3D01G269000.1 Wheat nucleus 34.62 30.38
TraesCS3B01G303300.1 Wheat nucleus 34.62 30.38
TraesCS3A01G269200.1 Wheat nucleus 34.62 30.38
KXG33109 Sorghum nucleus 34.41 29.96
TraesCS1B01G415500.2 Wheat nucleus 36.13 29.95
TraesCS1D01G396000.2 Wheat cytosol, mitochondrion, nucleus 35.91 29.87
HORVU1Hr1G029800.11 Barley plastid 30.54 29.77
TraesCS1A01G129500.2 Wheat nucleus 31.4 29.61
TraesCS1A01G388000.1 Wheat cytosol, mitochondrion, nucleus 35.7 29.59
HORVU1Hr1G085630.1 Barley cytosol, nucleus 36.13 29.02
TraesCS1B01G146400.2 Wheat plastid 31.18 27.94
Solyc10g007000.2.1 Tomato cytosol 40.0 27.89
TraesCS1D01G125200.2 Wheat plastid 31.18 27.83
KRH27240 Soybean cytosol 41.72 27.56
HORVU3Hr1G062370.3 Barley golgi 34.84 27.5
VIT_19s0014g02760.t01 Wine grape nucleus 43.23 26.8
KRH22096 Soybean cytosol 41.08 26.42
PGSC0003DMT400064440 Potato nucleus 40.86 26.1
PGSC0003DMT400039746 Potato nucleus 36.56 23.45
Solyc12g013820.1.1 Tomato nucleus 37.2 23.32
Os01t0229900-01 Rice mitochondrion 13.55 23.16
KRH55293 Soybean cytosol, peroxisome, plastid 40.0 21.4
Bra021874.1-P Field mustard nucleus 31.18 16.76
Bra017778.1-P Field mustard cytosol 28.82 14.97
Bra013040.1-P Field mustard cytosol, extracellular, mitochondrion, nucleus 26.45 9.9
Os03t0679300-01 Rice mitochondrion 3.01 8.43
Protein Annotations
EnsemblPlants:Bra040814.1EnsemblPlants:Bra040814.1-PEnsemblPlantsGene:Bra040814Gene3D:3.10.110.10InterPro:IPR000608InterPro:IPR016135
InterPro:UBQ-conjugat_E2InterPro:UBQ-conjugating_enzyme/RWDPANTHER:PTHR44273PANTHER:PTHR44273:SF5PFAM:PF00179PFscan:PS50127
SEG:segSMART:SM00212SUPFAM:SSF54495UniParc:UPI000253E958UniProt:M4FI85MapMan:35.1
Description
AT1G53020 (E=3e-128) UBC26, PFU3 | UBC26 (UBIQUITIN-CONJUGATING ENZYME 26); ubiquitin-protein ligase
Coordinates
chrScaffold000267:-:27674..30201
Molecular Weight (calculated)
52145.0 Da
IEP (calculated)
9.216
GRAVY (calculated)
-0.484
Length
465 amino acids
Sequence
(BLAST)
001: MEPDVVEIAP PLFPSGSRTR KPRKAGIPEV IDVEHYEFRN ANLVDKKNKG KAIQDGSLYD HLADEEVVMS TTQPWGFPSS SSKRSRRSSS ASSSRPRAAV
101: EVVVSSAQAN FLRDFKRFDT VDNFSKHHYA SQGNASKQHS RTWVKKIQAD WKILENDLPE TISVRACESR MDLLRAVIVG AEGTPYHEGL FFFDIHFPDT
201: YPSVPPMVHY HSGGLRINPN LYNCGKVCLS LLGTWNGNAR EKWLPQESTM LQLLVSIQAL ILNQKPYFNE PAYERTKGTP SGEAHSKFYS ENVYVLSLRT
301: MVYSMRKPPK HFEEFVRSHY FERAHDIVKA SNAYIDGAPV GSIVKGGVQD IEESSENGSM KFRTEVATFM KTVVEELVKL GVKELEDKLK PPPNAEGSNK
401: SNCKRSISSS INFKPSTHKA TKFMISLVFK RGNPVLDGLV DYGYHLLSSM YPTVVPKEEG GSVLS
Best Arabidopsis Sequence Match ( AT1G53025.2 )
(BLAST)
001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSSIKEFLAN IGRCVFQ
Arabidopsis Description
Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.