Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97660 | Canola | cytosol | 98.36 | 98.01 |
| Bra021105.1-P | Field mustard | nucleus | 76.0 | 70.02 |
| Bra001591.1-P | Field mustard | nucleus | 66.0 | 67.35 |
| Bra036393.1-P | Field mustard | cytosol, extracellular | 9.64 | 62.35 |
| HORVU3Hr1G109730.1 | Barley | cytosol | 17.45 | 59.63 |
| AT3G15355.1 | Thale cress | nucleus | 63.45 | 57.31 |
| Bra038095.1-P | Field mustard | cytosol, nucleus, peroxisome | 33.64 | 56.92 |
| Bra041020.1-P | Field mustard | plastid | 33.09 | 55.32 |
| HORVU1Hr1G090980.2 | Barley | cytosol | 19.09 | 52.5 |
| GSMUA_Achr7P25120_001 | Banana | cytosol | 28.18 | 51.84 |
| KRH26136 | Soybean | cytosol | 27.09 | 49.01 |
| Bra019007.1-P | Field mustard | cytosol | 42.91 | 47.48 |
| Bra030965.1-P | Field mustard | nucleus | 40.55 | 47.45 |
| Zm00001d009007_P001 | Maize | cytosol | 20.91 | 46.94 |
| Bra040814.1-P | Field mustard | cytosol | 39.64 | 46.88 |
| Os01t0677500-00 | Rice | cytosol | 28.73 | 45.8 |
| TraesCS5D01G272300.1 | Wheat | cytosol, nucleus, plastid | 27.09 | 43.57 |
| KRH26135 | Soybean | cytosol | 30.55 | 43.19 |
| Zm00001d051483_P001 | Maize | mitochondrion, nucleus, peroxisome | 15.45 | 42.08 |
| Zm00001d015028_P001 | Maize | cytosol, mitochondrion, nucleus | 15.27 | 41.58 |
| HORVU2Hr1G062530.3 | Barley | cytosol | 9.82 | 41.54 |
| TraesCS3D01G164800.2 | Wheat | mitochondrion, nucleus, plastid | 28.18 | 41.01 |
| TraesCS3A01G157200.1 | Wheat | mitochondrion, nucleus, plastid | 27.82 | 40.91 |
| TraesCS3B01G183600.1 | Wheat | mitochondrion, nucleus | 28.0 | 40.85 |
| HORVU5Hr1G000190.3 | Barley | cytosol | 9.64 | 40.77 |
| Zm00001d009513_P003 | Maize | cytosol | 29.09 | 40.3 |
| KXG31477 | Sorghum | mitochondrion, plastid | 26.91 | 40.22 |
| EES17914 | Sorghum | plastid | 32.73 | 39.13 |
| Os09t0294300-01 | Rice | nucleus | 30.73 | 39.03 |
| TraesCS3A01G157300.2 | Wheat | nucleus | 25.64 | 38.42 |
| Zm00001d039280_P005 | Maize | mitochondrion, nucleus, plastid | 26.0 | 38.34 |
| TraesCS3B01G183000.1 | Wheat | nucleus, plastid | 31.45 | 38.27 |
| Zm00001d039285_P001 | Maize | cytosol, plastid | 31.27 | 38.22 |
| GSMUA_Achr6P22670_001 | Banana | cytosol | 31.82 | 38.21 |
| HORVU3Hr1G031890.10 | Barley | cytosol, nucleus | 27.64 | 38.19 |
| HORVU3Hr1G031950.4 | Barley | mitochondrion | 25.45 | 38.15 |
| TraesCS3D01G164200.1 | Wheat | nucleus, plastid | 31.27 | 38.14 |
| TraesCS3A01G156300.1 | Wheat | nucleus, plastid | 31.45 | 38.11 |
| TraesCS3B01G183800.2 | Wheat | nucleus | 25.45 | 38.04 |
| Os05t0232500-01 | Rice | nucleus, plastid | 32.18 | 37.9 |
| TraesCS3D01G164900.3 | Wheat | nucleus | 25.27 | 37.77 |
| KXG31481 | Sorghum | nucleus | 31.45 | 37.69 |
| GSMUA_Achr10P... | Banana | nucleus | 32.36 | 37.4 |
| Zm00001d047959_P001 | Maize | cytosol | 15.09 | 37.22 |
| TraesCS5D01G272400.1 | Wheat | nucleus | 30.36 | 36.87 |
| HORVU1Hr1G029800.11 | Barley | plastid | 31.64 | 36.48 |
| TraesCS5B01G264000.1 | Wheat | nucleus | 29.82 | 36.2 |
| TraesCS1A01G129500.2 | Wheat | nucleus | 32.18 | 35.9 |
| HORVU3Hr1G031730.4 | Barley | nucleus, plastid | 31.27 | 35.83 |
| GSMUA_Achr9P00210_001 | Banana | plastid | 34.91 | 35.75 |
| Os05t0557600-01 | Rice | cytosol | 32.91 | 35.56 |
| Os01t0232500-01 | Rice | nucleus | 30.91 | 35.05 |
| Zm00001d049101_P001 | Maize | cytosol | 9.82 | 34.62 |
| TraesCS1B01G146400.2 | Wheat | plastid | 32.36 | 34.3 |
| TraesCS1D01G125200.2 | Wheat | plastid | 32.36 | 34.17 |
| EES19929 | Sorghum | nucleus | 31.45 | 34.12 |
| TraesCS3A01G269200.1 | Wheat | nucleus | 32.55 | 33.77 |
| TraesCS3D01G269000.1 | Wheat | nucleus | 32.55 | 33.77 |
| TraesCS3B01G303300.1 | Wheat | nucleus | 32.36 | 33.58 |
| KXG33109 | Sorghum | nucleus | 32.18 | 33.15 |
| Os01t0233900-01 | Rice | mitochondrion | 27.27 | 32.26 |
| TraesCS1B01G415500.2 | Wheat | nucleus | 32.55 | 31.91 |
| TraesCS1A01G388000.1 | Wheat | cytosol, mitochondrion, nucleus | 32.36 | 31.73 |
| TraesCS1D01G396000.2 | Wheat | cytosol, mitochondrion, nucleus | 32.18 | 31.66 |
| HORVU1Hr1G085630.1 | Barley | cytosol, nucleus | 32.73 | 31.09 |
| Solyc10g007000.2.1 | Tomato | cytosol | 37.45 | 30.88 |
| VIT_19s0014g02760.t01 | Wine grape | nucleus | 41.45 | 30.4 |
| HORVU3Hr1G062370.3 | Barley | golgi | 32.55 | 30.39 |
| KRH27240 | Soybean | cytosol | 38.73 | 30.26 |
| KRH22096 | Soybean | cytosol | 38.0 | 28.91 |
| PGSC0003DMT400064440 | Potato | nucleus | 38.18 | 28.85 |
| PGSC0003DMT400039746 | Potato | nucleus | 37.82 | 28.69 |
| Solyc12g013820.1.1 | Tomato | nucleus | 38.0 | 28.17 |
| Os01t0229900-01 | Rice | mitochondrion | 13.45 | 27.21 |
| KRH55293 | Soybean | cytosol, peroxisome, plastid | 34.55 | 21.86 |
| Bra021874.1-P | Field mustard | nucleus | 28.36 | 18.03 |
| Bra017778.1-P | Field mustard | cytosol | 26.91 | 16.54 |
| Os03t0679300-01 | Rice | mitochondrion | 4.0 | 13.25 |
| Bra013040.1-P | Field mustard | cytosol, extracellular, mitochondrion, nucleus | 24.36 | 10.78 |
Protein Annotations
| EnsemblPlants:Bra027252.1 | EnsemblPlants:Bra027252.1-P | EnsemblPlantsGene:Bra027252 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 |
| InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44273 | PANTHER:PTHR44273:SF5 | PFAM:PF00179 | PFscan:PS50127 |
| SEG:seg | SMART:SM00212 | SUPFAM:SSF54495 | UniParc:UPI0002547A2F | UniProt:M4EEP0 | MapMan:35.1 |
Description
AT3G15355 (E=1e-143) UBC25, PFU1 | UBC25 (UBIQUITIN-CONJUGATING ENZYME 25); small conjugating protein ligase
Coordinates
chrA05:-:19946680..19949248
Molecular Weight (calculated)
60637.5 Da
IEP (calculated)
4.565
GRAVY (calculated)
-0.520
Length
550 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPEIAHPVA SCSITLTPNK APTSDANGVE EQYEMQNGGG VVDNKNKGKA IQLESPSDDE QLEGSASDSY DATNNNGSTP LSDSLLDPDS LVYEDDDDYS
101: DHYAYEIEDE IEDDHADDYV SEYQALFDAK EKEIPAGVEV AMDWLPSSET AKPSGSSSSS SSSKKATTGS GIYLTPNNAY ALPQKIHGFH YSGPALKYSS
201: THLGPKTDPG TVMEAPAPAS SGLSLQMSKK NPGYLGFAST RPHVEEVISA PSTYTVKRNV EDYLGKYLFF KKFDIVEDLV DHHYAAKGTA SKQHSKEWTK
301: RIQEEWKILE KDLPEQTIFV RAYESRMDLL RAVIVGADGT PYHDGLFFFD IFFPDTYPSG PPMVHYHSGG LRINPNLYNS GKVCLSLLGT WSGVQTEKWI
401: PNESTMLQVL VSIQGLILNQ KPFFNEPGYE RLAGSPSGEG QSNAYSEKIF LLSLKTMVYN MRRPPKYFKD FAYGHFLSSA HDVLKACNAY RNGAPVASLV
501: RGNVKGGEES SERCSESFKK DVGVFVDTLL LKEFILLGVL GLEPEENEED
101: DHYAYEIEDE IEDDHADDYV SEYQALFDAK EKEIPAGVEV AMDWLPSSET AKPSGSSSSS SSSKKATTGS GIYLTPNNAY ALPQKIHGFH YSGPALKYSS
201: THLGPKTDPG TVMEAPAPAS SGLSLQMSKK NPGYLGFAST RPHVEEVISA PSTYTVKRNV EDYLGKYLFF KKFDIVEDLV DHHYAAKGTA SKQHSKEWTK
301: RIQEEWKILE KDLPEQTIFV RAYESRMDLL RAVIVGADGT PYHDGLFFFD IFFPDTYPSG PPMVHYHSGG LRINPNLYNS GKVCLSLLGT WSGVQTEKWI
401: PNESTMLQVL VSIQGLILNQ KPFFNEPGYE RLAGSPSGEG QSNAYSEKIF LLSLKTMVYN MRRPPKYFKD FAYGHFLSSA HDVLKACNAY RNGAPVASLV
501: RGNVKGGEES SERCSESFKK DVGVFVDTLL LKEFILLGVL GLEPEENEED
001: MEPNVVEIAT PPAASCSRIR TPTKAETPEV IDVEEYDLQN GGVPNGNNVD YKNKGKAIDF DSMSYGDYGE EDEYAVGSPG DDYGYPESSP LSNSLLDPES
101: LIYEDDENYS EQYDFEMEAE PDNYSMYQDL FDGKDIPTGV EVSMDWFPNS ADKESASSSK SSHANNGNNS SKKATKASGI HSQFSSDMET PVAQPWNALP
201: HKAEGVIPNS AYALPQNSKA FQPPYAVHYS ALKTAFSNYL QPQTPDTVLG EAPAPAAGSS GLLPPNTPGF KSNAARFKEE PPILPPDDSR VKRNMEDYLG
301: LYLFFKRFDI VEDFSDHHYA SKGTTSKQHS KDWAKRIQDE WRILEKDLPE MIFVRAYESR MDLLRAVIIG AQGTPYHDGL FFFDIFFPDT YPSTPPIVHY
401: HSGGLRINPN LYNCGKVCLS LLGTWSGNQR EKWIPNTSTM LQVLVSIQGL ILNQKPYFNE PGYERSAGSA HGESTSKAYS ENTFILSLKT MVYTMRRPPK
501: YFEDFAYGHF FSCAHDVLKA CNAYRNGATP GYLVKGAPDV EENSAGMSSL KFRTDVATFV ETVLLKEFIL LGVLGLEPEE EEKTPETIIV AESSKCTRSR
601: SKRDRVSSS
101: LIYEDDENYS EQYDFEMEAE PDNYSMYQDL FDGKDIPTGV EVSMDWFPNS ADKESASSSK SSHANNGNNS SKKATKASGI HSQFSSDMET PVAQPWNALP
201: HKAEGVIPNS AYALPQNSKA FQPPYAVHYS ALKTAFSNYL QPQTPDTVLG EAPAPAAGSS GLLPPNTPGF KSNAARFKEE PPILPPDDSR VKRNMEDYLG
301: LYLFFKRFDI VEDFSDHHYA SKGTTSKQHS KDWAKRIQDE WRILEKDLPE MIFVRAYESR MDLLRAVIIG AQGTPYHDGL FFFDIFFPDT YPSTPPIVHY
401: HSGGLRINPN LYNCGKVCLS LLGTWSGNQR EKWIPNTSTM LQVLVSIQGL ILNQKPYFNE PGYERSAGSA HGESTSKAYS ENTFILSLKT MVYTMRRPPK
501: YFEDFAYGHF FSCAHDVLKA CNAYRNGATP GYLVKGAPDV EENSAGMSSL KFRTDVATFV ETVLLKEFIL LGVLGLEPEE EEKTPETIIV AESSKCTRSR
601: SKRDRVSSS
Arabidopsis Description
UBC25Probable ubiquitin-conjugating enzyme E2 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.