Factsheet for HORVU3Hr1G109730.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G090980.2	Barley	cytosol	83.85	67.5
CDY30673	Canola	nucleus	52.8	46.96
HORVU2Hr1G062530.3	Barley	cytosol	37.89	46.92
HORVU5Hr1G000190.3	Barley	cytosol	36.65	45.38
Zm00001d051483_P001	Maize	mitochondrion, nucleus, peroxisome	54.66	43.56
Zm00001d015028_P001	Maize	cytosol, mitochondrion, nucleus	54.66	43.56
Bra036393.1-P	Field mustard	cytosol, extracellular	21.12	40.0
TraesCS3A01G157200.1	Wheat	mitochondrion, nucleus, plastid	90.06	38.77
TraesCS3B01G183600.1	Wheat	mitochondrion, nucleus	90.68	38.73
TraesCS3D01G164800.2	Wheat	mitochondrion, nucleus, plastid	89.44	38.1
Zm00001d047959_P001	Maize	cytosol	50.93	36.77
HORVU3Hr1G031890.10	Barley	cytosol, nucleus	90.68	36.68
CDY51802	Canola	cytosol	45.34	35.61
KXG31477	Sorghum	mitochondrion, plastid	80.75	35.33
HORVU3Hr1G031950.4	Barley	mitochondrion	76.4	33.52
Zm00001d039280_P005	Maize	mitochondrion, nucleus, plastid	77.64	33.51
KRH26136	Soybean	cytosol	60.25	31.91
Zm00001d049101_P001	Maize	cytosol	30.43	31.41
CDY25883	Canola	cytosol	50.31	28.62
AT1G53023.1	Thale cress	cytosol	54.66	27.85
Bra038095.1-P	Field mustard	cytosol, nucleus, peroxisome	55.9	27.69
Bra041020.1-P	Field mustard	plastid	56.52	27.66
Os01t0233900-01	Rice	mitochondrion	77.64	26.88
CDY25884	Canola	plastid	52.8	25.68
KRH26135	Soybean	cytosol	60.87	25.19
KRH58633	Soybean	cytosol, nucleus	61.49	22.1
HORVU3Hr1G031730.4	Barley	nucleus, plastid	65.22	21.88
CDY55875	Canola	nucleus	57.76	21.78
PGSC0003DMT400047166	Potato	nucleus	62.11	21.64
Solyc07g053960.2.1	Tomato	nucleus	62.11	21.6
GSMUA_Achr10P...	Banana	nucleus	63.35	21.43
CDX71178	Canola	cytosol	56.52	21.11
KRH42541	Soybean	nucleus	62.11	21.1
HORVU1Hr1G029800.11	Barley	plastid	62.11	20.96
CDX82439	Canola	cytosol	59.63	20.91
Bra030965.1-P	Field mustard	nucleus	59.01	20.21
Bra040814.1-P	Field mustard	cytosol	57.76	20.0
CDY25886	Canola	cytosol	57.76	20.0
CDY02528	Canola	cytosol	59.01	19.79
CDY47562	Canola	cytosol	59.01	19.71
CDX75824	Canola	cytosol	56.52	19.49
VIT_12s0028g03630.t01	Wine grape	nucleus	61.49	19.37
CDY24125	Canola	cytosol	58.39	19.34
HORVU1Hr1G085630.1	Barley	cytosol, nucleus	68.94	19.17
Bra019007.1-P	Field mustard	cytosol	58.39	18.91
HORVU3Hr1G062370.3	Barley	golgi	68.94	18.85
CDY26018	Canola	cytosol	58.39	18.5
Bra001591.1-P	Field mustard	nucleus	59.63	17.81
CDX98552	Canola	cytosol	59.01	17.46
Bra027252.1-P	Field mustard	cytosol	59.63	17.45
CDX97660	Canola	cytosol	59.63	17.39
AT1G53025.2	Thale cress	nucleus	56.52	16.34
Bra021105.1-P	Field mustard	nucleus	59.63	16.08
CDY20117	Canola	nucleus	59.63	16.05
AT3G15355.1	Thale cress	nucleus	59.01	15.6
CDY21838	Canola	cytosol	59.63	14.79
Solyc10g007000.2.1	Tomato	cytosol	59.63	14.39
KRH27240	Soybean	cytosol	62.73	14.35
KRH22096	Soybean	cytosol	63.98	14.25
VIT_19s0014g02760.t01	Wine grape	nucleus	61.49	13.2
PGSC0003DMT400064440	Potato	nucleus	59.63	13.19
PGSC0003DMT400039746	Potato	nucleus	58.39	12.97
Solyc12g013820.1.1	Tomato	nucleus	59.01	12.8
HORVU1Hr1G085570.2	Barley	cytosol	60.87	11.57
KRH55293	Soybean	cytosol, peroxisome, plastid	58.39	10.82
HORVU3Hr1G004520.2	Barley	nucleus	59.63	8.71

Protein Annotations

EnsemblPlants:HORVU3Hr1G109730.1	EnsemblPlantsGene:HORVU3Hr1G109730	Gene3D:3.10.110.10	InterPro:IPR000608	InterPro:IPR016135	InterPro:UBQ-conjugat_E2
InterPro:UBQ-conjugating_enzyme/RWD	PANTHER:PTHR44273	PANTHER:PTHR44273:SF1	PFAM:PF00179	PFscan:PS50127	SMART:SM00212
SUPFAM:SSF54495	UniParc:UPI000B46C276	UniProt:A0A287MN74	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr3H:+:679236460..679237713

Molecular Weight (calculated)

18417.3 Da

IEP (calculated)

8.955

GRAVY (calculated)

-0.283

Length

161 amino acids

Sequence
(BLAST)

001: SIYVRVYEDK IDLLRAAIVG PSGTPYHDGR FFFDVRFPPE YPRCPPKVDY HSGGLRLNPN LYESGKVCLS LLNTWWGSGC ENWSKSNSTM LQVLISIQGL
101: VLNDKPYFNE PCYKNTVNTP LGEKHSMAYN QTTFVLSCKT MLYLLRKPPK LIYRTLISCH G

Best Arabidopsis Sequence Match ( AT1G53025.1 )
(BLAST)

001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR

Arabidopsis Description

Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.