Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021105.1-P | Field mustard | nucleus | 99.0 | 99.16 |
| CDY21838 | Canola | cytosol | 95.82 | 88.29 |
| CDX82439 | Canola | cytosol | 60.03 | 78.21 |
| CDX98552 | Canola | cytosol | 69.73 | 76.65 |
| CDX97660 | Canola | cytosol | 69.73 | 75.54 |
| CDX75824 | Canola | cytosol | 55.85 | 71.52 |
| CDY30673 | Canola | nucleus | 20.9 | 69.06 |
| CDY51802 | Canola | cytosol | 22.58 | 65.85 |
| AT3G15355.1 | Thale cress | nucleus | 62.88 | 61.74 |
| HORVU3Hr1G109730.1 | Barley | cytosol | 16.05 | 59.63 |
| CDY25883 | Canola | cytosol | 27.42 | 57.95 |
| CDY25884 | Canola | plastid | 29.93 | 54.08 |
| HORVU1Hr1G090980.2 | Barley | cytosol | 17.56 | 52.5 |
| CDY55875 | Canola | nucleus | 36.96 | 51.76 |
| CDX71178 | Canola | cytosol | 36.62 | 50.81 |
| GSMUA_Achr7P25120_001 | Banana | cytosol | 24.92 | 49.83 |
| CDY26018 | Canola | cytosol | 41.97 | 49.41 |
| CDY24125 | Canola | cytosol | 39.8 | 48.97 |
| CDY25886 | Canola | cytosol | 37.12 | 47.74 |
| CDY02528 | Canola | cytosol | 38.29 | 47.71 |
| CDY47562 | Canola | cytosol | 38.29 | 47.51 |
| Zm00001d009007_P001 | Maize | cytosol | 19.06 | 46.53 |
| KRH26136 | Soybean | cytosol | 23.58 | 46.38 |
| Os01t0677500-00 | Rice | cytosol | 26.09 | 45.22 |
| TraesCS5D01G272300.1 | Wheat | cytosol, nucleus, plastid | 24.75 | 43.27 |
| Zm00001d051483_P001 | Maize | mitochondrion, nucleus, peroxisome | 14.21 | 42.08 |
| Zm00001d015028_P001 | Maize | cytosol, mitochondrion, nucleus | 14.21 | 42.08 |
| HORVU5Hr1G000190.3 | Barley | cytosol | 9.03 | 41.54 |
| HORVU2Hr1G062530.3 | Barley | cytosol | 9.03 | 41.54 |
| Zm00001d009513_P003 | Maize | cytosol | 27.26 | 41.06 |
| KRH26135 | Soybean | cytosol | 26.42 | 40.62 |
| TraesCS3B01G183600.1 | Wheat | mitochondrion, nucleus | 25.08 | 39.79 |
| TraesCS3D01G164800.2 | Wheat | mitochondrion, nucleus, plastid | 25.08 | 39.68 |
| KXG31477 | Sorghum | mitochondrion, plastid | 24.41 | 39.67 |
| TraesCS3A01G157200.1 | Wheat | mitochondrion, nucleus, plastid | 24.75 | 39.57 |
| GSMUA_Achr6P22670_001 | Banana | cytosol | 30.1 | 39.3 |
| Os09t0294300-01 | Rice | nucleus | 28.26 | 39.03 |
| EES17914 | Sorghum | plastid | 29.6 | 38.48 |
| Zm00001d039285_P001 | Maize | cytosol, plastid | 28.76 | 38.22 |
| TraesCS3D01G164200.1 | Wheat | nucleus, plastid | 28.76 | 38.14 |
| TraesCS3B01G183000.1 | Wheat | nucleus, plastid | 28.76 | 38.05 |
| HORVU3Hr1G031950.4 | Barley | mitochondrion | 23.24 | 37.87 |
| TraesCS3A01G157300.2 | Wheat | nucleus | 23.24 | 37.87 |
| Zm00001d039280_P005 | Maize | mitochondrion, nucleus, plastid | 23.58 | 37.8 |
| TraesCS3A01G156300.1 | Wheat | nucleus, plastid | 28.6 | 37.67 |
| TraesCS5D01G272400.1 | Wheat | nucleus | 28.43 | 37.53 |
| TraesCS3D01G164900.3 | Wheat | nucleus | 23.08 | 37.5 |
| TraesCS3B01G183800.2 | Wheat | nucleus | 23.08 | 37.5 |
| HORVU3Hr1G031890.10 | Barley | cytosol, nucleus | 24.92 | 37.44 |
| Zm00001d047959_P001 | Maize | cytosol | 13.88 | 37.22 |
| Os05t0557600-01 | Rice | cytosol | 31.61 | 37.13 |
| KXG31481 | Sorghum | nucleus | 28.43 | 37.04 |
| Os05t0232500-01 | Rice | nucleus, plastid | 28.76 | 36.83 |
| TraesCS5B01G264000.1 | Wheat | nucleus | 27.76 | 36.64 |
| TraesCS1A01G129500.2 | Wheat | nucleus | 29.93 | 36.31 |
| HORVU1Hr1G029800.11 | Barley | plastid | 28.93 | 36.27 |
| HORVU3Hr1G031730.4 | Barley | nucleus, plastid | 28.76 | 35.83 |
| GSMUA_Achr10P... | Banana | nucleus | 28.43 | 35.71 |
| Zm00001d049101_P001 | Maize | cytosol | 9.2 | 35.26 |
| EES19929 | Sorghum | nucleus | 29.77 | 35.11 |
| GSMUA_Achr9P00210_001 | Banana | plastid | 31.44 | 35.01 |
| Os01t0232500-01 | Rice | nucleus | 28.09 | 34.64 |
| TraesCS1B01G146400.2 | Wheat | plastid | 29.77 | 34.3 |
| TraesCS1D01G125200.2 | Wheat | plastid | 29.77 | 34.17 |
| TraesCS3B01G303300.1 | Wheat | nucleus | 29.93 | 33.77 |
| TraesCS3A01G269200.1 | Wheat | nucleus | 29.6 | 33.4 |
| TraesCS3D01G269000.1 | Wheat | nucleus | 29.6 | 33.4 |
| CDX72600 | Canola | cytosol | 6.69 | 33.33 |
| KXG33109 | Sorghum | nucleus | 29.6 | 33.15 |
| TraesCS1B01G415500.2 | Wheat | nucleus | 30.94 | 32.98 |
| TraesCS1D01G396000.2 | Wheat | cytosol, mitochondrion, nucleus | 30.77 | 32.92 |
| TraesCS1A01G388000.1 | Wheat | cytosol, mitochondrion, nucleus | 30.77 | 32.8 |
| KRH27240 | Soybean | cytosol | 38.46 | 32.67 |
| HORVU1Hr1G085630.1 | Barley | cytosol, nucleus | 31.27 | 32.3 |
| Solyc10g007000.2.1 | Tomato | cytosol | 35.95 | 32.23 |
| Os01t0233900-01 | Rice | mitochondrion | 24.58 | 31.61 |
| VIT_19s0014g02760.t01 | Wine grape | nucleus | 39.3 | 31.33 |
| KRH22096 | Soybean | cytosol | 37.79 | 31.26 |
| PGSC0003DMT400064440 | Potato | nucleus | 36.62 | 30.08 |
| HORVU3Hr1G062370.3 | Barley | golgi | 29.6 | 30.05 |
| PGSC0003DMT400039746 | Potato | nucleus | 34.95 | 28.83 |
| Solyc12g013820.1.1 | Tomato | nucleus | 35.28 | 28.44 |
| Os01t0229900-01 | Rice | mitochondrion | 11.71 | 25.74 |
| KRH55293 | Soybean | cytosol, peroxisome, plastid | 31.77 | 21.86 |
| CDY42703 | Canola | cytosol, mitochondrion, nucleus | 23.75 | 21.13 |
| CDY53783 | Canola | nucleus | 25.92 | 18.3 |
| CDY37693 | Canola | nucleus | 25.75 | 17.8 |
| CDX89761 | Canola | nucleus | 26.42 | 15.09 |
| Os03t0679300-01 | Rice | mitochondrion | 3.34 | 12.05 |
| CDY02226 | Canola | endoplasmic reticulum, extracellular | 23.08 | 11.39 |
Protein Annotations
| EnsemblPlants:CDY20117 | EnsemblPlantsGene:GSBRNA2T00009973001 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44273 | PANTHER:PTHR44273:SF5 | PFAM:PF00179 | PFscan:PS50127 | ProteinID:CDY20117 |
| ProteinID:CDY20117.1 | SEG:seg | SMART:SM00212 | SUPFAM:SSF54495 | UniParc:UPI0004EDB7D4 | UniProt:A0A078G568 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA01g28850DBnaA01g28850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G568]
Coordinates
chrLK032103:-:249369..252284
Molecular Weight (calculated)
66217.7 Da
IEP (calculated)
4.438
GRAVY (calculated)
-0.619
Length
598 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPEIAHPVA SCSATLKTTP PEANGVVNNN NVDSKNKGKA IELEDDDEQL EGSASDCYDT TNNDESYPGS SPLSNSLLDP DSLIYEDDDD YSDQYGYEME
101: DELEEEEEED GAGDYVSEYQ ALFDAKEKDI PAGVEVSMDW LPNSETSKSS GSGKCSRDEH GIKPEAPSSS SKKATVGSGI HSSWNTLPHN SKGVIPNSAY
201: ALPMKTQIYN YSAHALKFSS SSSDHLEPQT PDTVMGEAPV PAPAQASSGL VLPVPNHPPW YKGHKMYPSA RPRVDEVISA QSCSRVKRNM EDYLGKYLFF
301: KKFDIVEDLG DHEYATQGTT TKQHSKEWMK RIQEEWRILE NDLPEMIFVR AYESRMDLMR AVIVGADGTP YHDGLFFFDI YFPDTYPSVP PMVHYQSGGL
401: RINPNLYNCG KVCLSLLGTW SGAPREKWIP NNSTMLQVLV SIQGLILNEK PYFNEPGYER TAGSAGGEAQ SKAYSENTFL LSLKTMVYNM RRPPKYFEDF
501: SYGHFFSCAH DVLRACTAYR NGAPVASLVR GKVKEGEESS ERCSEKFSQD VGITVDTLLL KEFILLGVLG LEPEEDKPSE IDVAESSNGS PRGGMSSN
101: DELEEEEEED GAGDYVSEYQ ALFDAKEKDI PAGVEVSMDW LPNSETSKSS GSGKCSRDEH GIKPEAPSSS SKKATVGSGI HSSWNTLPHN SKGVIPNSAY
201: ALPMKTQIYN YSAHALKFSS SSSDHLEPQT PDTVMGEAPV PAPAQASSGL VLPVPNHPPW YKGHKMYPSA RPRVDEVISA QSCSRVKRNM EDYLGKYLFF
301: KKFDIVEDLG DHEYATQGTT TKQHSKEWMK RIQEEWRILE NDLPEMIFVR AYESRMDLMR AVIVGADGTP YHDGLFFFDI YFPDTYPSVP PMVHYQSGGL
401: RINPNLYNCG KVCLSLLGTW SGAPREKWIP NNSTMLQVLV SIQGLILNEK PYFNEPGYER TAGSAGGEAQ SKAYSENTFL LSLKTMVYNM RRPPKYFEDF
501: SYGHFFSCAH DVLRACTAYR NGAPVASLVR GKVKEGEESS ERCSEKFSQD VGITVDTLLL KEFILLGVLG LEPEEDKPSE IDVAESSNGS PRGGMSSN
001: MEPNVVEIAT PPAASCSRIR TPTKAETPEV IDVEEYDLQN GGVPNGNNVD YKNKGKAIDF DSMSYGDYGE EDEYAVGSPG DDYGYPESSP LSNSLLDPES
101: LIYEDDENYS EQYDFEMEAE PDNYSMYQDL FDGKDIPTGV EVSMDWFPNS ADKESASSSK SSHANNGNNS SKKATKASGI HSQFSSDMET PVAQPWNALP
201: HKAEGVIPNS AYALPQNSKA FQPPYAVHYS ALKTAFSNYL QPQTPDTVLG EAPAPAAGSS GLLPPNTPGF KSNAARFKEE PPILPPDDSR VKRNMEDYLG
301: LYLFFKRFDI VEDFSDHHYA SKGTTSKQHS KDWAKRIQDE WRILEKDLPE MIFVRAYESR MDLLRAVIIG AQGTPYHDGL FFFDIFFPDT YPSTPPIVHY
401: HSGGLRINPN LYNCGKVCLS LLGTWSGNQR EKWIPNTSTM LQVLVSIQGL ILNQKPYFNE PGYERSAGSA HGESTSKAYS ENTFILSLKT MVYTMRRPPK
501: YFEDFAYGHF FSCAHDVLKA CNAYRNGATP GYLVKGAPDV EENSAGMSSL KFRTDVATFV ETVLLKEFIL LGVLGLEPEE EEKTPETIIV AESSKCTRSR
601: SKRDRVSSS
101: LIYEDDENYS EQYDFEMEAE PDNYSMYQDL FDGKDIPTGV EVSMDWFPNS ADKESASSSK SSHANNGNNS SKKATKASGI HSQFSSDMET PVAQPWNALP
201: HKAEGVIPNS AYALPQNSKA FQPPYAVHYS ALKTAFSNYL QPQTPDTVLG EAPAPAAGSS GLLPPNTPGF KSNAARFKEE PPILPPDDSR VKRNMEDYLG
301: LYLFFKRFDI VEDFSDHHYA SKGTTSKQHS KDWAKRIQDE WRILEKDLPE MIFVRAYESR MDLLRAVIIG AQGTPYHDGL FFFDIFFPDT YPSTPPIVHY
401: HSGGLRINPN LYNCGKVCLS LLGTWSGNQR EKWIPNTSTM LQVLVSIQGL ILNQKPYFNE PGYERSAGSA HGESTSKAYS ENTFILSLKT MVYTMRRPPK
501: YFEDFAYGHF FSCAHDVLKA CNAYRNGATP GYLVKGAPDV EENSAGMSSL KFRTDVATFV ETVLLKEFIL LGVLGLEPEE EEKTPETIIV AESSKCTRSR
601: SKRDRVSSS
Arabidopsis Description
UBC25Probable ubiquitin-conjugating enzyme E2 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.