Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37693 | Canola | nucleus | 96.46 | 94.45 |
| AT2G33770.1 | Thale cress | nucleus | 83.83 | 78.28 |
| VIT_00s1927g00020.t01 | Wine grape | cytosol, nucleus | 19.95 | 70.12 |
| CDY30673 | Canola | nucleus | 11.22 | 52.49 |
| CDX72600 | Canola | cytosol | 7.2 | 50.83 |
| VIT_00s0265g00070.t01 | Wine grape | cytosol | 56.08 | 50.32 |
| KRH21442 | Soybean | nucleus | 52.42 | 48.31 |
| PGSC0003DMT400076435 | Potato | nucleus | 52.66 | 48.16 |
| KRH20454 | Soybean | cytosol, nucleus, peroxisome | 53.01 | 48.12 |
| KRH50043 | Soybean | cytosol | 52.42 | 47.9 |
| Solyc02g078210.2.1 | Tomato | cytosol | 52.18 | 47.78 |
| KRH10881 | Soybean | nucleus | 51.95 | 47.62 |
| CDY51802 | Canola | cytosol | 11.45 | 47.32 |
| GSMUA_Achr9P06210_001 | Banana | cytosol | 48.41 | 45.86 |
| Os05t0557700-01 | Rice | cytosol | 46.16 | 44.63 |
| HORVU1Hr1G085570.2 | Barley | cytosol | 43.92 | 43.92 |
| TraesCS1A01G388400.1 | Wheat | cytosol | 43.68 | 43.89 |
| TraesCS1B01G415800.1 | Wheat | cytosol | 43.45 | 43.6 |
| EES19930 | Sorghum | cytosol | 44.51 | 43.28 |
| TraesCS1D01G396300.1 | Wheat | nucleus | 43.57 | 43.21 |
| CDY25884 | Canola | plastid | 15.94 | 40.79 |
| CDY25883 | Canola | cytosol | 13.46 | 40.28 |
| CDY55875 | Canola | nucleus | 17.36 | 34.43 |
| CDY42703 | Canola | cytosol, mitochondrion, nucleus | 27.15 | 34.23 |
| GSMUA_Achr9P00220_001 | Banana | cytosol | 19.48 | 33.33 |
| CDX89761 | Canola | nucleus | 40.5 | 32.76 |
| CDX71178 | Canola | cytosol | 16.65 | 32.71 |
| CDY47562 | Canola | cytosol | 18.06 | 31.74 |
| CDY24125 | Canola | cytosol | 18.18 | 31.69 |
| CDY02528 | Canola | cytosol | 17.95 | 31.67 |
| CDY25886 | Canola | cytosol | 17.24 | 31.4 |
| CDX82439 | Canola | cytosol | 17.0 | 31.37 |
| CDY26018 | Canola | cytosol | 18.42 | 30.71 |
| CDX75824 | Canola | cytosol | 16.77 | 30.41 |
| CDX98552 | Canola | cytosol | 18.54 | 28.86 |
| CDX97660 | Canola | cytosol | 18.65 | 28.62 |
| CDY02226 | Canola | endoplasmic reticulum, extracellular | 37.9 | 26.49 |
| CDY20117 | Canola | nucleus | 18.3 | 25.92 |
| Zm00001d038972_P002 | Maize | endoplasmic reticulum, golgi, plastid | 43.8 | 25.76 |
| CDY21838 | Canola | cytosol | 18.65 | 24.35 |
Protein Annotations
| EnsemblPlants:CDY53783 | EnsemblPlantsGene:GSBRNA2T00011442001 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44422 | PANTHER:PTHR44422:SF2 | PFAM:PF00179 | PFscan:PS50127 | ProteinID:CDY53783 |
| ProteinID:CDY53783.1 | SEG:seg | SMART:SM00212 | SUPFAM:SSF54495 | UniParc:UPI0004EDB7B1 | UniProt:A0A078IXN2 |
| MapMan:25.3.1.2 | : | : | : | : | : |
Description
BnaC04g44130DBnaC04g44130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IXN2]
Coordinates
chrLK033237:+:34331..37695
Molecular Weight (calculated)
93668.7 Da
IEP (calculated)
4.564
GRAVY (calculated)
-0.291
Length
847 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMNLTDSDW ESSSDSGSSE QEEVEFSYGG RAQDIFSNLE ETIGKIDDFL SFERGFMYGD IVRSAAEPSG QSGRVINVDM SVNLESIHGK VVKEVDTKRL
101: QRLRSISLCD YVINGPWLGR VDKIVERVSV TLDDGSNYEV LVRNQDQLVA VPPNMLEDSQ YTYYPGQRVQ VKLAHAPRST SWLCGNWREN QALGTVCSVE
201: AGLVYVEWVA SIIMGGGDRN LTAPQALQSP ESLTLLPSVP HASWQLGDWC ILPGASHCDV EELQNGFSRN MQRSSSDELF VITKTKMKVD VLWQDGGCSM
301: GVDSQQLVPV GAVNAHDFWP EQFVVEKETC NSKRWGVVKV VNANEQTVKV QWRTLTEKEA SEQMEEVVSA YELLEHPDFG FCYSDVVFSV ATETKHLLTD
401: GDYSGAYCLS SIGVVAGFRN GVVEVKWANG STSEVAPYEI WRMERSEFSS SSAISPASSV QDLSQKIAQS DESSSNHQET GLVNLYSVGE SCNVNVLESS
501: SFFLPKAAIG FITSLASSLF GSHGSTSAIS SHSLCNDTED QSDSEILVQE ATEPHTISES KSDETLDSTI VSFKQFDMVT DCSDHHFFSP GKEVTQPPVT
601: KSWVKKVQQE WSNLEADLPN TIYVRVYEER MDLLRAALVG APGTPYHDGL FFFDIMLPPQ YPHEPPMVHY HSGGMRLNPN LYESGRVCLS LLNTWNGSGT
701: EVWNPGSSSI LQVLLSFQAL VLNEKPYFNE AGYDKQLGRA EGEKNSVSYN ENAFLITCKS MISLLRKPPK HFEVLVKDHF THRAHHVLAA CKANMEGVPV
801: GSSSKLQESS TTNSTGFKIM LTKLYPKLVE AFSEIGVDCS QGVALEP
101: QRLRSISLCD YVINGPWLGR VDKIVERVSV TLDDGSNYEV LVRNQDQLVA VPPNMLEDSQ YTYYPGQRVQ VKLAHAPRST SWLCGNWREN QALGTVCSVE
201: AGLVYVEWVA SIIMGGGDRN LTAPQALQSP ESLTLLPSVP HASWQLGDWC ILPGASHCDV EELQNGFSRN MQRSSSDELF VITKTKMKVD VLWQDGGCSM
301: GVDSQQLVPV GAVNAHDFWP EQFVVEKETC NSKRWGVVKV VNANEQTVKV QWRTLTEKEA SEQMEEVVSA YELLEHPDFG FCYSDVVFSV ATETKHLLTD
401: GDYSGAYCLS SIGVVAGFRN GVVEVKWANG STSEVAPYEI WRMERSEFSS SSAISPASSV QDLSQKIAQS DESSSNHQET GLVNLYSVGE SCNVNVLESS
501: SFFLPKAAIG FITSLASSLF GSHGSTSAIS SHSLCNDTED QSDSEILVQE ATEPHTISES KSDETLDSTI VSFKQFDMVT DCSDHHFFSP GKEVTQPPVT
601: KSWVKKVQQE WSNLEADLPN TIYVRVYEER MDLLRAALVG APGTPYHDGL FFFDIMLPPQ YPHEPPMVHY HSGGMRLNPN LYESGRVCLS LLNTWNGSGT
701: EVWNPGSSSI LQVLLSFQAL VLNEKPYFNE AGYDKQLGRA EGEKNSVSYN ENAFLITCKS MISLLRKPPK HFEVLVKDHF THRAHHVLAA CKANMEGVPV
801: GSSSKLQESS TTNSTGFKIM LTKLYPKLVE AFSEIGVDCS QGVALEP
001: MEMSLTDSDW DSSSDSGSSE HEEVEFSYGG RAQNIFSNLE ETIGKIDEFL SFERGFMYGD IVRSATEPSG QSGRVINIDM FVNLESTHGK IMKEVDTKRL
101: QKLRSISLSD YVINGPWVGR VDKIVERVSV TLDDGTNYEV LVDGQDKLVA IPPNLLEDSQ YSYYPGQRVQ VKLAHAPRST TWLCGTWRGT QVMGTVCTVE
201: AGLVYVDWVA SIVMEGDRNL TAPQALQNPE SLTLLPCVSH ASWQLGDWCI LPGSSHCDIA ERQTPNVAAY NLNECHKTFQ KGFNRNMQNS GLDELFVITK
301: TKMKVAVMWQ DGSCSLGVDS QQLLPVGAVN AHDFWPEQFV VEKETCNSKK WGVVKAVNAK EQTVKVQWTI QVEKEATGCV DEVMEEIVSA YELLEHPDFG
401: FCFSDVVVKL LPEGKFDPNA DTIVATEAKH LLTESDYSGA YFLSSIGVVT GFKNGSVKVK WANGSTSKVA PCEIWKMERS EYSNSSTVSS EGSVQDLSQK
501: ISQSDEASSN HQETGLVKLY SVGESCNENI PECSSFFLPK AAIGFITNLA SSLFGYQGST SVISSHSRCN DSEDQSDSEV LVQETAESYD NSETNSGEVD
601: MTTTMVNIPI EGKGINKTLD STLLENSRNQ VRFRQFDMVN DCSDHHFLSS DKGLAQSQVT KSWVKKVQQE WSNLEANLPN TIYVRVCEER MDLLRAALVG
701: APGTPYHDGL FFFDIMLPPQ YPHEPPMVHY HSGGMRLNPN LYESGRVCLS LLNTWSGSGT EVWNAGSSSI LQLLLSFQAL VLNEKPYFNE AGYDKQLGRA
801: EGEKNSVSYN ENAFLITCKS MISMLRKPPK HFEMLVKDHF THRAQHVLAA CKAYMEGVPV GSSANLQGNS TTNSTGFKIM LSKLYPKLLE AFSEIGVDCV
901: QEIGPES
101: QKLRSISLSD YVINGPWVGR VDKIVERVSV TLDDGTNYEV LVDGQDKLVA IPPNLLEDSQ YSYYPGQRVQ VKLAHAPRST TWLCGTWRGT QVMGTVCTVE
201: AGLVYVDWVA SIVMEGDRNL TAPQALQNPE SLTLLPCVSH ASWQLGDWCI LPGSSHCDIA ERQTPNVAAY NLNECHKTFQ KGFNRNMQNS GLDELFVITK
301: TKMKVAVMWQ DGSCSLGVDS QQLLPVGAVN AHDFWPEQFV VEKETCNSKK WGVVKAVNAK EQTVKVQWTI QVEKEATGCV DEVMEEIVSA YELLEHPDFG
401: FCFSDVVVKL LPEGKFDPNA DTIVATEAKH LLTESDYSGA YFLSSIGVVT GFKNGSVKVK WANGSTSKVA PCEIWKMERS EYSNSSTVSS EGSVQDLSQK
501: ISQSDEASSN HQETGLVKLY SVGESCNENI PECSSFFLPK AAIGFITNLA SSLFGYQGST SVISSHSRCN DSEDQSDSEV LVQETAESYD NSETNSGEVD
601: MTTTMVNIPI EGKGINKTLD STLLENSRNQ VRFRQFDMVN DCSDHHFLSS DKGLAQSQVT KSWVKKVQQE WSNLEANLPN TIYVRVCEER MDLLRAALVG
701: APGTPYHDGL FFFDIMLPPQ YPHEPPMVHY HSGGMRLNPN LYESGRVCLS LLNTWSGSGT EVWNAGSSSI LQLLLSFQAL VLNEKPYFNE AGYDKQLGRA
801: EGEKNSVSYN ENAFLITCKS MISMLRKPPK HFEMLVKDHF THRAQHVLAA CKAYMEGVPV GSSANLQGNS TTNSTGFKIM LSKLYPKLLE AFSEIGVDCV
901: QEIGPES
Arabidopsis Description
UBC24Probable ubiquitin-conjugating enzyme E2 24 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY10]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.