Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400076435 | Potato | nucleus | 96.32 | 96.22 |
| VIT_00s1927g00020.t01 | Wine grape | cytosol, nucleus | 19.03 | 73.03 |
| VIT_00s0265g00070.t01 | Wine grape | cytosol | 56.22 | 55.08 |
| CDY53783 | Canola | nucleus | 47.78 | 52.18 |
| KRH20454 | Soybean | cytosol, nucleus, peroxisome | 52.11 | 51.66 |
| Bra021874.1-P | Field mustard | nucleus | 48.11 | 51.45 |
| CDY37693 | Canola | nucleus | 48.11 | 51.45 |
| KRH50043 | Soybean | cytosol | 51.46 | 51.35 |
| KRH21442 | Soybean | nucleus | 50.81 | 51.14 |
| KRH10881 | Soybean | nucleus | 50.05 | 50.11 |
| AT2G33770.1 | Thale cress | nucleus | 47.24 | 48.18 |
| GSMUA_Achr9P06210_001 | Banana | cytosol | 46.49 | 48.1 |
| HORVU1Hr1G085570.2 | Barley | cytosol | 42.27 | 46.16 |
| TraesCS1A01G388400.1 | Wheat | cytosol | 42.05 | 46.14 |
| TraesCS1B01G415800.1 | Wheat | cytosol | 42.05 | 46.09 |
| TraesCS1D01G396300.1 | Wheat | nucleus | 42.05 | 45.55 |
| Os05t0557700-01 | Rice | cytosol | 42.92 | 45.32 |
| EES19930 | Sorghum | cytosol | 42.27 | 44.89 |
| Solyc07g053960.2.1 | Tomato | nucleus | 20.11 | 40.17 |
| GSMUA_Achr9P00220_001 | Banana | cytosol | 18.38 | 34.34 |
| Solyc01g111680.2.1 | Tomato | nucleus | 36.43 | 33.97 |
| Solyc01g079290.1.1 | Tomato | cytosol | 9.84 | 32.04 |
| Solyc10g007000.2.1 | Tomato | cytosol | 19.78 | 27.44 |
| Zm00001d038972_P002 | Maize | endoplasmic reticulum, golgi, plastid | 41.08 | 26.39 |
| Solyc12g013820.1.1 | Tomato | nucleus | 20.43 | 25.47 |
Protein Annotations
| MapMan:25.3.1.2 | Gene3D:3.10.110.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005794 |
| GO:GO:0006464 | GO:GO:0006810 | GO:GO:0006817 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009605 | GO:GO:0009987 | GO:GO:0009991 | GO:GO:0016036 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0031625 | GO:GO:0044257 | GO:GO:0055062 |
| GO:GO:0061630 | GO:GO:2000185 | InterPro:IPR000608 | InterPro:IPR016135 | UniProt:K4B946 | EMBL:KY246916 |
| PFAM:PF00179 | PFscan:PS50127 | PANTHER:PTHR44422 | PANTHER:PTHR44422:SF2 | SMART:SM00212 | SUPFAM:SSF54495 |
| EnsemblPlantsGene:Solyc02g078210.2 | EnsemblPlants:Solyc02g078210.2.1 | InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI00027680D3 | SEG:seg |
Description
UBC24 [Source:UniProtKB/TrEMBL;Acc:K4B946]
Coordinates
chr2:+:42969589..42975368
Molecular Weight (calculated)
102835.0 Da
IEP (calculated)
4.567
GRAVY (calculated)
-0.335
Length
925 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTSLSDFDS FSESSSYDDQ DYVEYLYGGH ACSILSSLEE SIGKIDDFLS FERVFMYGDI VCSEKEPSGQ MGKVVNVEMT VDLECIYGSK IQDVNSKDLV
101: KIRPISVGDY VVMGPWLGKV EKIVDKIKVL FDDGAKSEFS AEASEILTPI SPDLVEDPQF PFYPGQRVQV QSVSASGSTS WLCGVRSGKR EQGTIYAVEA
201: GVVHVDWIGC GSLGCEKMPS PPTLQDSEKL TLLSCYSHAK WQLGDCCVLP VADSKNIVRK SIQSSPPCGP MEQDRQLNKA SQKTNRSSTF LQVAVISKTR
301: TKVDILWQDG SVTTGLDSDS VFPVNIVDAH EFWPEHFVLE KGMGDDSSVP SPKRWGVVRC VDAKERTVKV KWTTYSLHEP NNFRVEQSEE IVSAYELMDH
401: PDYSYCLGDA VCKFCEDQVF SLEGKSLSTH MFSETGMDSN TDLKNVDTGK DNLDFPKYDH LSCIGIIVGF KDGDIEIKWA TGFTSMVAPF EIYRIDKCEA
501: AVSISASNAE NAEPSNVEMS SNESQLSKHE EKGLLKFGSN SESCNESLWD SGSCLISRTA VGFFSSITST LFGSLSISLF GTYQTISEEG QKSRIVDEEE
601: VIELSHLNAG IPTFENLKAS PEMELEQVQE TTEGQKDDAL PSSSNLPEHF KQFDVVTDFS DHHFADGAGK AQLSQVRRGW LKKVQQEWSI LERDLPETIY
701: VRIYEERTDL IRAAIIGAPA TPYHDGIFFF DIYLPPDYPH EPPMVYYHSG GLRVNPNLYE SGKVCLSLLN TWTGSGNEVW NPKSSTILQV LLSLQALVLN
801: EKPYFNEAGY DAQIGKADGE KNSVSYNENA FLVTWKSMLY LLHKPPKHFD ALVQEHFGNR WKNILLACKA YMDGAPVGSA FQPKNQDKEP IKGSSTGFKI
901: MLGKLYPKLV EAFSNKGIDC SQLSD
101: KIRPISVGDY VVMGPWLGKV EKIVDKIKVL FDDGAKSEFS AEASEILTPI SPDLVEDPQF PFYPGQRVQV QSVSASGSTS WLCGVRSGKR EQGTIYAVEA
201: GVVHVDWIGC GSLGCEKMPS PPTLQDSEKL TLLSCYSHAK WQLGDCCVLP VADSKNIVRK SIQSSPPCGP MEQDRQLNKA SQKTNRSSTF LQVAVISKTR
301: TKVDILWQDG SVTTGLDSDS VFPVNIVDAH EFWPEHFVLE KGMGDDSSVP SPKRWGVVRC VDAKERTVKV KWTTYSLHEP NNFRVEQSEE IVSAYELMDH
401: PDYSYCLGDA VCKFCEDQVF SLEGKSLSTH MFSETGMDSN TDLKNVDTGK DNLDFPKYDH LSCIGIIVGF KDGDIEIKWA TGFTSMVAPF EIYRIDKCEA
501: AVSISASNAE NAEPSNVEMS SNESQLSKHE EKGLLKFGSN SESCNESLWD SGSCLISRTA VGFFSSITST LFGSLSISLF GTYQTISEEG QKSRIVDEEE
601: VIELSHLNAG IPTFENLKAS PEMELEQVQE TTEGQKDDAL PSSSNLPEHF KQFDVVTDFS DHHFADGAGK AQLSQVRRGW LKKVQQEWSI LERDLPETIY
701: VRIYEERTDL IRAAIIGAPA TPYHDGIFFF DIYLPPDYPH EPPMVYYHSG GLRVNPNLYE SGKVCLSLLN TWTGSGNEVW NPKSSTILQV LLSLQALVLN
801: EKPYFNEAGY DAQIGKADGE KNSVSYNENA FLVTWKSMLY LLHKPPKHFD ALVQEHFGNR WKNILLACKA YMDGAPVGSA FQPKNQDKEP IKGSSTGFKI
901: MLGKLYPKLV EAFSNKGIDC SQLSD
001: MEMSLTDSDW DSSSDSGSSE HEEVEFSYGG RAQNIFSNLE ETIGKIDEFL SFERGFMYGD IVRSATEPSG QSGRVINIDM FVNLESTHGK IMKEVDTKRL
101: QKLRSISLSD YVINGPWVGR VDKIVERVSV TLDDGTNYEV LVDGQDKLVA IPPNLLEDSQ YSYYPGQRVQ VKLAHAPRST TWLCGTWRGT QVMGTVCTVE
201: AGLVYVDWVA SIVMEGDRNL TAPQALQNPE SLTLLPCVSH ASWQLGDWCI LPGSSHCDIA ERQTPNVAAY NLNECHKTFQ KGFNRNMQNS GLDELFVITK
301: TKMKVAVMWQ DGSCSLGVDS QQLLPVGAVN AHDFWPEQFV VEKETCNSKK WGVVKAVNAK EQTVKVQWTI QVEKEATGCV DEVMEEIVSA YELLEHPDFG
401: FCFSDVVVKL LPEGKFDPNA DTIVATEAKH LLTESDYSGA YFLSSIGVVT GFKNGSVKVK WANGSTSKVA PCEIWKMERS EYSNSSTVSS EGSVQDLSQK
501: ISQSDEASSN HQETGLVKLY SVGESCNENI PECSSFFLPK AAIGFITNLA SSLFGYQGST SVISSHSRCN DSEDQSDSEV LVQETAESYD NSETNSGEVD
601: MTTTMVNIPI EGKGINKTLD STLLENSRNQ VRFRQFDMVN DCSDHHFLSS DKGLAQSQVT KSWVKKVQQE WSNLEANLPN TIYVRVCEER MDLLRAALVG
701: APGTPYHDGL FFFDIMLPPQ YPHEPPMVHY HSGGMRLNPN LYESGRVCLS LLNTWSGSGT EVWNAGSSSI LQLLLSFQAL VLNEKPYFNE AGYDKQLGRA
801: EGEKNSVSYN ENAFLITCKS MISMLRKPPK HFEMLVKDHF THRAQHVLAA CKAYMEGVPV GSSANLQGNS TTNSTGFKIM LSKLYPKLLE AFSEIGVDCV
901: QEIGPES
101: QKLRSISLSD YVINGPWVGR VDKIVERVSV TLDDGTNYEV LVDGQDKLVA IPPNLLEDSQ YSYYPGQRVQ VKLAHAPRST TWLCGTWRGT QVMGTVCTVE
201: AGLVYVDWVA SIVMEGDRNL TAPQALQNPE SLTLLPCVSH ASWQLGDWCI LPGSSHCDIA ERQTPNVAAY NLNECHKTFQ KGFNRNMQNS GLDELFVITK
301: TKMKVAVMWQ DGSCSLGVDS QQLLPVGAVN AHDFWPEQFV VEKETCNSKK WGVVKAVNAK EQTVKVQWTI QVEKEATGCV DEVMEEIVSA YELLEHPDFG
401: FCFSDVVVKL LPEGKFDPNA DTIVATEAKH LLTESDYSGA YFLSSIGVVT GFKNGSVKVK WANGSTSKVA PCEIWKMERS EYSNSSTVSS EGSVQDLSQK
501: ISQSDEASSN HQETGLVKLY SVGESCNENI PECSSFFLPK AAIGFITNLA SSLFGYQGST SVISSHSRCN DSEDQSDSEV LVQETAESYD NSETNSGEVD
601: MTTTMVNIPI EGKGINKTLD STLLENSRNQ VRFRQFDMVN DCSDHHFLSS DKGLAQSQVT KSWVKKVQQE WSNLEANLPN TIYVRVCEER MDLLRAALVG
701: APGTPYHDGL FFFDIMLPPQ YPHEPPMVHY HSGGMRLNPN LYESGRVCLS LLNTWSGSGT EVWNAGSSSI LQLLLSFQAL VLNEKPYFNE AGYDKQLGRA
801: EGEKNSVSYN ENAFLITCKS MISMLRKPPK HFEMLVKDHF THRAQHVLAA CKAYMEGVPV GSSANLQGNS TTNSTGFKIM LSKLYPKLLE AFSEIGVDCV
901: QEIGPES
Arabidopsis Description
UBC24Probable ubiquitin-conjugating enzyme E2 24 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY10]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.