Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- peroxisome 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH50043 | Soybean | cytosol | 91.64 | 92.23 |
| VIT_00s1927g00020.t01 | Wine grape | cytosol, nucleus | 20.15 | 78.01 |
| KRH21442 | Soybean | nucleus | 74.06 | 75.19 |
| KRH10881 | Soybean | nucleus | 73.2 | 73.92 |
| VIT_00s0265g00070.t01 | Wine grape | cytosol | 60.13 | 59.43 |
| CDY53783 | Canola | nucleus | 48.12 | 53.01 |
| PGSC0003DMT400076435 | Potato | nucleus | 52.3 | 52.7 |
| Bra021874.1-P | Field mustard | nucleus | 48.55 | 52.37 |
| CDY37693 | Canola | nucleus | 48.45 | 52.25 |
| Solyc02g078210.2.1 | Tomato | cytosol | 51.66 | 52.11 |
| AT2G33770.1 | Thale cress | nucleus | 48.34 | 49.72 |
| GSMUA_Achr9P06210_001 | Banana | cytosol | 45.23 | 47.2 |
| TraesCS1B01G415800.1 | Wheat | cytosol | 42.23 | 46.68 |
| TraesCS1A01G388400.1 | Wheat | cytosol | 42.02 | 46.5 |
| HORVU1Hr1G085570.2 | Barley | cytosol | 42.12 | 46.4 |
| TraesCS1D01G396300.1 | Wheat | nucleus | 42.34 | 46.25 |
| EES19930 | Sorghum | cytosol | 42.77 | 45.81 |
| Os05t0557700-01 | Rice | cytosol | 42.55 | 45.32 |
| KRH50716 | Soybean | nucleus | 15.01 | 43.21 |
| KRH26136 | Soybean | cytosol | 13.5 | 41.45 |
| KRH02368 | Soybean | cytosol | 12.86 | 40.68 |
| KRH02367 | Soybean | cytosol, golgi, nucleus | 14.26 | 39.35 |
| KRH02369 | Soybean | cytosol | 13.72 | 38.44 |
| GSMUA_Achr9P00220_001 | Banana | cytosol | 19.61 | 36.97 |
| KRH26135 | Soybean | cytosol | 15.22 | 36.5 |
| KRH58633 | Soybean | cytosol, nucleus | 17.26 | 35.94 |
| KRH42541 | Soybean | nucleus | 17.79 | 35.02 |
| KRG90672 | Soybean | nucleus | 38.16 | 31.67 |
| Zm00001d038972_P002 | Maize | endoplasmic reticulum, golgi, plastid | 42.02 | 27.22 |
| KRH27240 | Soybean | cytosol | 20.15 | 26.7 |
| KRH22096 | Soybean | cytosol | 20.26 | 26.14 |
| KRH36075 | Soybean | nucleus | 13.5 | 23.86 |
| KRH55293 | Soybean | cytosol, peroxisome, plastid | 18.01 | 19.33 |
Protein Annotations
| EntrezGene:100306246 | MapMan:25.3.1.2 | Gene3D:3.10.110.10 | EMBL:ACUP02008265 | EnsemblPlantsGene:GLYMA_13G179600 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0031625 | GO:GO:0061630 | UniProt:I1M0A8 | InterPro:IPR000608 |
| InterPro:IPR016135 | EnsemblPlants:KRH20454 | ProteinID:KRH20454 | ProteinID:KRH20454.1 | ProteinID:KRH20455.1 | PFAM:PF00179 |
| PFscan:PS50127 | PANTHER:PTHR44422 | PANTHER:PTHR44422:SF2 | SMART:SM00212 | SUPFAM:SSF54495 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI000233B7EB | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr13:+:29318702..29323855
Molecular Weight (calculated)
104615.0 Da
IEP (calculated)
4.764
GRAVY (calculated)
-0.384
Length
933 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLIISDSDW ETSSGSNSSE DQDEIDFLYG GKAQSILSSL EESIGRIDDF LSFERAFVHG DVVCSLSDPS GQMGRVTSMD LFVDLESVKG KVLKNLNSKK
101: LLRIRSIAEG DYVIKGPWLG RVQRVVDKVA VLFDDGAKCD ITALEREKLL PLTGNFPEDS QFPYYPGQRV KVKSSSASKS TRWLCDTWRD NHDEGTVCAV
201: EAGLVYVNWI SHVLVGCDFS VSAPKCWQDS KTLTVLSCFS HANWQLGDWC MLSVADQKEQ ITQHAPIGDL TMEHCVSRGC KGSNLNSYSG ELFIIGKIKT
301: KVDVVWQNGE YTLGLDPENL LPVNVINNHE FWPHQFVLEK GASDDPLKTS SQRWGVVQCV DAKECTVKVQ WKTISISDPD NLTGDKLEET VSAYELVEHP
401: DYSCFFGDIM FKAAQKQLGN QAEKEQAKSV TDFNAEAVPK NGNQMSYQDE FPDNYFMSCI GSVTGFKDGD VEVTWATGFT TKVAPYEIFR IEKHEGSTVT
501: PTPFETNVEE FTHEIIEHRS LPSDQKGKDL LNGDGTRENC EKNLGECSSF SLPRAAFELF SSIKASIFQT FRGTLISGAV SSVPTFEKKN GYDCLDKKDL
601: ETSDLFTEQH PMAELQYTED KTSYPENIEI HEKNDFPFSL DSNSSNQFKQ FDVIENCPDH HFFVEGKGLS TSQVKRSWVK KVQQEWSILE KNLPETIYVR
701: VFEERMDLMR AAIVGASGTP YHDGLFFFDI CFPPEYPNEP PMVHYNSAGL RLNPNLYESG KICLSLLNTW TGTDTEVWNP GASTILQVLL SLQALVLNEK
801: PYFNEAGYDQ QIGRAEGEKN SVSYNENAFL VTTKSMMYLL RKPPKHFEAL VEEHFRKCSQ HILLACKAYL EGASIGCAFG SGKTGHENQK GTSTGFKIML
901: AKLFPKLVEA FSDKGIDCSQ FVDLQKEPLL TKL
101: LLRIRSIAEG DYVIKGPWLG RVQRVVDKVA VLFDDGAKCD ITALEREKLL PLTGNFPEDS QFPYYPGQRV KVKSSSASKS TRWLCDTWRD NHDEGTVCAV
201: EAGLVYVNWI SHVLVGCDFS VSAPKCWQDS KTLTVLSCFS HANWQLGDWC MLSVADQKEQ ITQHAPIGDL TMEHCVSRGC KGSNLNSYSG ELFIIGKIKT
301: KVDVVWQNGE YTLGLDPENL LPVNVINNHE FWPHQFVLEK GASDDPLKTS SQRWGVVQCV DAKECTVKVQ WKTISISDPD NLTGDKLEET VSAYELVEHP
401: DYSCFFGDIM FKAAQKQLGN QAEKEQAKSV TDFNAEAVPK NGNQMSYQDE FPDNYFMSCI GSVTGFKDGD VEVTWATGFT TKVAPYEIFR IEKHEGSTVT
501: PTPFETNVEE FTHEIIEHRS LPSDQKGKDL LNGDGTRENC EKNLGECSSF SLPRAAFELF SSIKASIFQT FRGTLISGAV SSVPTFEKKN GYDCLDKKDL
601: ETSDLFTEQH PMAELQYTED KTSYPENIEI HEKNDFPFSL DSNSSNQFKQ FDVIENCPDH HFFVEGKGLS TSQVKRSWVK KVQQEWSILE KNLPETIYVR
701: VFEERMDLMR AAIVGASGTP YHDGLFFFDI CFPPEYPNEP PMVHYNSAGL RLNPNLYESG KICLSLLNTW TGTDTEVWNP GASTILQVLL SLQALVLNEK
801: PYFNEAGYDQ QIGRAEGEKN SVSYNENAFL VTTKSMMYLL RKPPKHFEAL VEEHFRKCSQ HILLACKAYL EGASIGCAFG SGKTGHENQK GTSTGFKIML
901: AKLFPKLVEA FSDKGIDCSQ FVDLQKEPLL TKL
001: MEMSLTDSDW DSSSDSGSSE HEEVEFSYGG RAQNIFSNLE ETIGKIDEFL SFERGFMYGD IVRSATEPSG QSGRVINIDM FVNLESTHGK IMKEVDTKRL
101: QKLRSISLSD YVINGPWVGR VDKIVERVSV TLDDGTNYEV LVDGQDKLVA IPPNLLEDSQ YSYYPGQRVQ VKLAHAPRST TWLCGTWRGT QVMGTVCTVE
201: AGLVYVDWVA SIVMEGDRNL TAPQALQNPE SLTLLPCVSH ASWQLGDWCI LPGSSHCDIA ERQTPNVAAY NLNECHKTFQ KGFNRNMQNS GLDELFVITK
301: TKMKVAVMWQ DGSCSLGVDS QQLLPVGAVN AHDFWPEQFV VEKETCNSKK WGVVKAVNAK EQTVKVQWTI QVEKEATGCV DEVMEEIVSA YELLEHPDFG
401: FCFSDVVVKL LPEGKFDPNA DTIVATEAKH LLTESDYSGA YFLSSIGVVT GFKNGSVKVK WANGSTSKVA PCEIWKMERS EYSNSSTVSS EGSVQDLSQK
501: ISQSDEASSN HQETGLVKLY SVGESCNENI PECSSFFLPK AAIGFITNLA SSLFGYQGST SVISSHSRCN DSEDQSDSEV LVQETAESYD NSETNSGEVD
601: MTTTMVNIPI EGKGINKTLD STLLENSRNQ VRFRQFDMVN DCSDHHFLSS DKGLAQSQVT KSWVKKVQQE WSNLEANLPN TIYVRVCEER MDLLRAALVG
701: APGTPYHDGL FFFDIMLPPQ YPHEPPMVHY HSGGMRLNPN LYESGRVCLS LLNTWSGSGT EVWNAGSSSI LQLLLSFQAL VLNEKPYFNE AGYDKQLGRA
801: EGEKNSVSYN ENAFLITCKS MISMLRKPPK HFEMLVKDHF THRAQHVLAA CKAYMEGVPV GSSANLQGNS TTNSTGFKIM LSKLYPKLLE AFSEIGVDCV
901: QEIGPES
101: QKLRSISLSD YVINGPWVGR VDKIVERVSV TLDDGTNYEV LVDGQDKLVA IPPNLLEDSQ YSYYPGQRVQ VKLAHAPRST TWLCGTWRGT QVMGTVCTVE
201: AGLVYVDWVA SIVMEGDRNL TAPQALQNPE SLTLLPCVSH ASWQLGDWCI LPGSSHCDIA ERQTPNVAAY NLNECHKTFQ KGFNRNMQNS GLDELFVITK
301: TKMKVAVMWQ DGSCSLGVDS QQLLPVGAVN AHDFWPEQFV VEKETCNSKK WGVVKAVNAK EQTVKVQWTI QVEKEATGCV DEVMEEIVSA YELLEHPDFG
401: FCFSDVVVKL LPEGKFDPNA DTIVATEAKH LLTESDYSGA YFLSSIGVVT GFKNGSVKVK WANGSTSKVA PCEIWKMERS EYSNSSTVSS EGSVQDLSQK
501: ISQSDEASSN HQETGLVKLY SVGESCNENI PECSSFFLPK AAIGFITNLA SSLFGYQGST SVISSHSRCN DSEDQSDSEV LVQETAESYD NSETNSGEVD
601: MTTTMVNIPI EGKGINKTLD STLLENSRNQ VRFRQFDMVN DCSDHHFLSS DKGLAQSQVT KSWVKKVQQE WSNLEANLPN TIYVRVCEER MDLLRAALVG
701: APGTPYHDGL FFFDIMLPPQ YPHEPPMVHY HSGGMRLNPN LYESGRVCLS LLNTWSGSGT EVWNAGSSSI LQLLLSFQAL VLNEKPYFNE AGYDKQLGRA
801: EGEKNSVSYN ENAFLITCKS MISMLRKPPK HFEMLVKDHF THRAQHVLAA CKAYMEGVPV GSSANLQGNS TTNSTGFKIM LSKLYPKLLE AFSEIGVDCV
901: QEIGPES
Arabidopsis Description
UBC24Probable ubiquitin-conjugating enzyme E2 24 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY10]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.