Factsheet for AT2G33770.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37693	Canola	nucleus	81.15	85.09
Bra021874.1-P	Field mustard	nucleus	80.82	84.74
CDY53783	Canola	nucleus	78.28	83.83
VIT_00s1927g00020.t01	Wine grape	cytosol, nucleus	18.08	68.05
VIT_00s0265g00070.t01	Wine grape	cytosol	52.37	50.32
KRH21442	Soybean	nucleus	49.06	48.42
KRH20454	Soybean	cytosol, nucleus, peroxisome	49.72	48.34
PGSC0003DMT400076435	Potato	nucleus	49.17	48.16
KRH50043	Soybean	cytosol	48.84	47.79
KRH10881	Soybean	nucleus	48.4	47.51
Solyc02g078210.2.1	Tomato	cytosol	48.18	47.24
GSMUA_Achr9P06210_001	Banana	cytosol	44.65	45.3
TraesCS1A01G388400.1	Wheat	cytosol	40.79	43.89
TraesCS1B01G415800.1	Wheat	cytosol	40.68	43.72
Os05t0557700-01	Rice	cytosol	42.12	43.61
HORVU1Hr1G085570.2	Barley	cytosol	40.68	43.57
TraesCS1D01G396300.1	Wheat	nucleus	40.79	43.33
EES19930	Sorghum	cytosol	41.23	42.94
AT1G53023.1	Thale cress	cytosol	14.66	42.09
GSMUA_Achr9P00220_001	Banana	cytosol	18.3	33.54
AT2G16920.1	Thale cress	nucleus	37.16	30.58
AT1G53025.2	Thale cress	nucleus	17.42	28.37
Zm00001d038972_P002	Maize	endoplasmic reticulum, golgi, plastid	40.79	25.69
AT3G15355.1	Thale cress	nucleus	16.98	25.29

Protein Annotations

MapMan:25.3.1.2	Gene3D:3.10.110.10	EntrezGene:817943	ProteinID:AAC69130.1	ProteinID:AEC08882.1	EMBL:AK229934
EMBL:AK230162	ArrayExpress:AT2G33770	EnsemblPlantsGene:AT2G33770	RefSeq:AT2G33770	TAIR:AT2G33770	RefSeq:AT2G33770-TAIR-G
EnsemblPlants:AT2G33770.1	TAIR:AT2G33770.1	EMBL:AY074292	EMBL:AY091326	Unigene:At.14693	EMBL:DQ027037
GO:GO:0000139	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005789	GO:GO:0005794	GO:GO:0006464	GO:GO:0006810	GO:GO:0006817	GO:GO:0006950
GO:GO:0007154	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009605	GO:GO:0009987
GO:GO:0009991	GO:GO:0016020	GO:GO:0016036	GO:GO:0016567	GO:GO:0016740	GO:GO:0016874
GO:GO:0019538	GO:GO:0031625	GO:GO:0044257	GO:GO:0055062	GO:GO:0061630	GO:GO:2000185
InterPro:IPR000608	InterPro:IPR016135	RefSeq:NP_850218.1	PFAM:PF00179	PO:PO:0000293	PO:PO:0009015
PFscan:PS50127	PANTHER:PTHR44422	PANTHER:PTHR44422:SF2	UniProt:Q8VY10	SMART:SM00212	SUPFAM:SSF54495
Symbol:UBC24	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI00000A4E56	SEG:seg	:

Description

UBC24Probable ubiquitin-conjugating enzyme E2 24 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY10]

Coordinates

chr2:-:14277558..14283113

Molecular Weight (calculated)

100489.0 Da

IEP (calculated)

4.681

GRAVY (calculated)

-0.320

Length

907 amino acids

Sequence
(BLAST)

001: MEMSLTDSDW DSSSDSGSSE HEEVEFSYGG RAQNIFSNLE ETIGKIDEFL SFERGFMYGD IVRSATEPSG QSGRVINIDM FVNLESTHGK IMKEVDTKRL
101: QKLRSISLSD YVINGPWVGR VDKIVERVSV TLDDGTNYEV LVDGQDKLVA IPPNLLEDSQ YSYYPGQRVQ VKLAHAPRST TWLCGTWRGT QVMGTVCTVE
201: AGLVYVDWVA SIVMEGDRNL TAPQALQNPE SLTLLPCVSH ASWQLGDWCI LPGSSHCDIA ERQTPNVAAY NLNECHKTFQ KGFNRNMQNS GLDELFVITK
301: TKMKVAVMWQ DGSCSLGVDS QQLLPVGAVN AHDFWPEQFV VEKETCNSKK WGVVKAVNAK EQTVKVQWTI QVEKEATGCV DEVMEEIVSA YELLEHPDFG
401: FCFSDVVVKL LPEGKFDPNA DTIVATEAKH LLTESDYSGA YFLSSIGVVT GFKNGSVKVK WANGSTSKVA PCEIWKMERS EYSNSSTVSS EGSVQDLSQK
501: ISQSDEASSN HQETGLVKLY SVGESCNENI PECSSFFLPK AAIGFITNLA SSLFGYQGST SVISSHSRCN DSEDQSDSEV LVQETAESYD NSETNSGEVD
601: MTTTMVNIPI EGKGINKTLD STLLENSRNQ VRFRQFDMVN DCSDHHFLSS DKGLAQSQVT KSWVKKVQQE WSNLEANLPN TIYVRVCEER MDLLRAALVG
701: APGTPYHDGL FFFDIMLPPQ YPHEPPMVHY HSGGMRLNPN LYESGRVCLS LLNTWSGSGT EVWNAGSSSI LQLLLSFQAL VLNEKPYFNE AGYDKQLGRA
801: EGEKNSVSYN ENAFLITCKS MISMLRKPPK HFEMLVKDHF THRAQHVLAA CKAYMEGVPV GSSANLQGNS TTNSTGFKIM LSKLYPKLLE AFSEIGVDCV
901: QEIGPES

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.