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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1A01G388400.1 Wheat cytosol 78.07 80.66
HORVU1Hr1G085570.2 Barley cytosol 78.3 80.52
TraesCS1D01G396300.1 Wheat nucleus 78.07 79.63
TraesCS1B01G415800.1 Wheat cytosol 77.04 79.5
Os05t0557700-01 Rice cytosol 78.65 78.2
VIT_00s1927g00020.t01 Wine grape cytosol, nucleus 17.8 64.32
Zm00001d038972_P002 Maize endoplasmic reticulum, golgi, plastid 92.77 56.11
GSMUA_Achr9P06210_001 Banana cytosol 50.63 49.33
CDY53783 Canola nucleus 43.28 44.51
VIT_00s0265g00070.t01 Wine grape cytosol 47.42 43.75
CDY37693 Canola nucleus 43.17 43.47
Bra021874.1-P Field mustard nucleus 43.05 43.35
KRH20454 Soybean cytosol, nucleus, peroxisome 45.81 42.77
KRH21442 Soybean nucleus 45.12 42.76
PGSC0003DMT400076435 Potato nucleus 45.12 42.44
Solyc02g078210.2.1 Tomato cytosol 44.89 42.27
KRH50043 Soybean cytosol 44.89 42.18
KRH10881 Soybean nucleus 44.55 41.99
KXG31477 Sorghum mitochondrion, plastid 17.45 41.3
AT2G33770.1 Thale cress nucleus 42.94 41.23
EES19929 Sorghum nucleus 21.58 37.08
EES17914 Sorghum plastid 18.25 34.57
GSMUA_Achr9P00220_001 Banana cytosol 19.29 33.94
KXG31481 Sorghum nucleus 17.34 32.9
KXG33109 Sorghum nucleus 19.17 31.27
EES02568 Sorghum nucleus 39.27 30.92
OQU79703 Sorghum cytosol 26.41 26.65
OQU84284 Sorghum mitochondrion, nucleus, plasma membrane, plastid 24.91 25.59
Protein Annotations
MapMan:25.3.1.2Gene3D:3.10.110.10EntrezGene:8074577UniProt:C5YVG1EnsemblPlants:EES19930ProteinID:EES19930
ProteinID:EES19930.1GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005794GO:GO:0006464
GO:GO:0006810GO:GO:0006817GO:GO:0006950GO:GO:0007154GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009605GO:GO:0009987GO:GO:0009991GO:GO:0016036GO:GO:0016567
GO:GO:0016740GO:GO:0019538GO:GO:0031625GO:GO:0044257GO:GO:0055062GO:GO:0061630
GO:GO:2000185InterPro:IPR000608InterPro:IPR016135PFAM:PF00179PFscan:PS50127PANTHER:PTHR44422
PANTHER:PTHR44422:SF2SMART:SM00212EnsemblPlantsGene:SORBI_3009G228100SUPFAM:SSF54495unigene:Sbi.4729InterPro:UBQ-conjugat_E2
InterPro:UBQ-conjugating_enzyme/RWDUniParc:UPI0001A8925BRefSeq:XP_002441500.1SEG:seg::
Description
hypothetical protein
Coordinates
chr9:-:56916040..56924765
Molecular Weight (calculated)
96678.1 Da
IEP (calculated)
4.640
GRAVY (calculated)
-0.182
Length
871 amino acids
Sequence
(BLAST)
001: MDLFAIDSDS ESYTGTSDSE DQECEFAYSD HAQNILSSLD ESIVKIDNFL TFERGFLHGD IVCPVSDPSG QLGRVVGVSM LVDLETSSGD IIKDVNSKKL
101: SRVRSFVSGD RVVMGPWIGR VIRAFDLVTL LFSDGAKCEI LLRDLDVLKP VPPILFEDAP YFYYPGQRVR IVDPSVSKSA TWLCGSWRPS RDDCIVSHVD
201: VGLVHVNWIT SVTNVWGDKS SSPSNIQDPK KLTLLSCFPY ANWQLGDWCA LMADNNGYLW MDSGKSCILS EDHKCDSHGH MYFESYGSDC SQTYVVAKTK
301: STVDVLWQNG TVSLGLEPQA LVPVSTLGDH DFWPGQYVLE KLTVEDAAKC QRTAIVRDVD ALERTVNVKW IDPAHSDTVS YGSDPAVETV SVYELVEHPD
401: FSFCTGEVVI RSAVNIDKSE ADLTNGSLAS KESLVTSSGF LSCIGNVLGY KDNGIEVQWA NGVISKVQHF EIIGLDRLLD NSSLESMNEE HTIGDSLGEA
501: EQEEMHHEIA LESTEDCTGS LCKATAFLFP KTAFDFLTNV AASLFGTRGS PSPSSVSVDP RYEIVKMAEM QPCVEELPKE KQIVKFVAQI EKPILSSEDA
601: ISKRFDVVTD CLDHHFVKEN GHESVTRGWL KKVQQEWSIL QNDLPDGIHV RVYEERMDLL RACIVGAAGT PYHDNLFFFD IFFPPDYPHE PPSVHYHSGG
701: LRLNPNLYES GKVCLSLLKT WTGTGNEVWN AENSTVLQLL LSLQALVLNE KPYFNEAGYD KFVGKADGEK NSITYNENAF LLSCKSMMYV LHKPPKHFEK
801: LVKEHFTCRS LHILDACEAY LGGDLVGHAH DKAYISEDGS KNCSTGFKIM LGKLLPKLVT AFYEAGITSD P
Best Arabidopsis Sequence Match ( AT2G33770.1 )
(BLAST)
001: MEMSLTDSDW DSSSDSGSSE HEEVEFSYGG RAQNIFSNLE ETIGKIDEFL SFERGFMYGD IVRSATEPSG QSGRVINIDM FVNLESTHGK IMKEVDTKRL
101: QKLRSISLSD YVINGPWVGR VDKIVERVSV TLDDGTNYEV LVDGQDKLVA IPPNLLEDSQ YSYYPGQRVQ VKLAHAPRST TWLCGTWRGT QVMGTVCTVE
201: AGLVYVDWVA SIVMEGDRNL TAPQALQNPE SLTLLPCVSH ASWQLGDWCI LPGSSHCDIA ERQTPNVAAY NLNECHKTFQ KGFNRNMQNS GLDELFVITK
301: TKMKVAVMWQ DGSCSLGVDS QQLLPVGAVN AHDFWPEQFV VEKETCNSKK WGVVKAVNAK EQTVKVQWTI QVEKEATGCV DEVMEEIVSA YELLEHPDFG
401: FCFSDVVVKL LPEGKFDPNA DTIVATEAKH LLTESDYSGA YFLSSIGVVT GFKNGSVKVK WANGSTSKVA PCEIWKMERS EYSNSSTVSS EGSVQDLSQK
501: ISQSDEASSN HQETGLVKLY SVGESCNENI PECSSFFLPK AAIGFITNLA SSLFGYQGST SVISSHSRCN DSEDQSDSEV LVQETAESYD NSETNSGEVD
601: MTTTMVNIPI EGKGINKTLD STLLENSRNQ VRFRQFDMVN DCSDHHFLSS DKGLAQSQVT KSWVKKVQQE WSNLEANLPN TIYVRVCEER MDLLRAALVG
701: APGTPYHDGL FFFDIMLPPQ YPHEPPMVHY HSGGMRLNPN LYESGRVCLS LLNTWSGSGT EVWNAGSSSI LQLLLSFQAL VLNEKPYFNE AGYDKQLGRA
801: EGEKNSVSYN ENAFLITCKS MISMLRKPPK HFEMLVKDHF THRAQHVLAA CKAYMEGVPV GSSANLQGNS TTNSTGFKIM LSKLYPKLLE AFSEIGVDCV
901: QEIGPES
Arabidopsis Description
UBC24Probable ubiquitin-conjugating enzyme E2 24 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY10]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.