Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1A01G388400.1 | Wheat | cytosol | 78.07 | 80.66 |
HORVU1Hr1G085570.2 | Barley | cytosol | 78.3 | 80.52 |
TraesCS1D01G396300.1 | Wheat | nucleus | 78.07 | 79.63 |
TraesCS1B01G415800.1 | Wheat | cytosol | 77.04 | 79.5 |
Os05t0557700-01 | Rice | cytosol | 78.65 | 78.2 |
VIT_00s1927g00020.t01 | Wine grape | cytosol, nucleus | 17.8 | 64.32 |
Zm00001d038972_P002 | Maize | endoplasmic reticulum, golgi, plastid | 92.77 | 56.11 |
GSMUA_Achr9P06210_001 | Banana | cytosol | 50.63 | 49.33 |
CDY53783 | Canola | nucleus | 43.28 | 44.51 |
VIT_00s0265g00070.t01 | Wine grape | cytosol | 47.42 | 43.75 |
CDY37693 | Canola | nucleus | 43.17 | 43.47 |
Bra021874.1-P | Field mustard | nucleus | 43.05 | 43.35 |
KRH20454 | Soybean | cytosol, nucleus, peroxisome | 45.81 | 42.77 |
KRH21442 | Soybean | nucleus | 45.12 | 42.76 |
PGSC0003DMT400076435 | Potato | nucleus | 45.12 | 42.44 |
Solyc02g078210.2.1 | Tomato | cytosol | 44.89 | 42.27 |
KRH50043 | Soybean | cytosol | 44.89 | 42.18 |
KRH10881 | Soybean | nucleus | 44.55 | 41.99 |
KXG31477 | Sorghum | mitochondrion, plastid | 17.45 | 41.3 |
AT2G33770.1 | Thale cress | nucleus | 42.94 | 41.23 |
EES19929 | Sorghum | nucleus | 21.58 | 37.08 |
EES17914 | Sorghum | plastid | 18.25 | 34.57 |
GSMUA_Achr9P00220_001 | Banana | cytosol | 19.29 | 33.94 |
KXG31481 | Sorghum | nucleus | 17.34 | 32.9 |
KXG33109 | Sorghum | nucleus | 19.17 | 31.27 |
EES02568 | Sorghum | nucleus | 39.27 | 30.92 |
OQU79703 | Sorghum | cytosol | 26.41 | 26.65 |
OQU84284 | Sorghum | mitochondrion, nucleus, plasma membrane, plastid | 24.91 | 25.59 |
Protein Annotations
MapMan:25.3.1.2 | Gene3D:3.10.110.10 | EntrezGene:8074577 | UniProt:C5YVG1 | EnsemblPlants:EES19930 | ProteinID:EES19930 |
ProteinID:EES19930.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005794 | GO:GO:0006464 |
GO:GO:0006810 | GO:GO:0006817 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009056 | GO:GO:0009605 | GO:GO:0009987 | GO:GO:0009991 | GO:GO:0016036 | GO:GO:0016567 |
GO:GO:0016740 | GO:GO:0019538 | GO:GO:0031625 | GO:GO:0044257 | GO:GO:0055062 | GO:GO:0061630 |
GO:GO:2000185 | InterPro:IPR000608 | InterPro:IPR016135 | PFAM:PF00179 | PFscan:PS50127 | PANTHER:PTHR44422 |
PANTHER:PTHR44422:SF2 | SMART:SM00212 | EnsemblPlantsGene:SORBI_3009G228100 | SUPFAM:SSF54495 | unigene:Sbi.4729 | InterPro:UBQ-conjugat_E2 |
InterPro:UBQ-conjugating_enzyme/RWD | UniParc:UPI0001A8925B | RefSeq:XP_002441500.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr9:-:56916040..56924765
Molecular Weight (calculated)
96678.1 Da
IEP (calculated)
4.640
GRAVY (calculated)
-0.182
Length
871 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLFAIDSDS ESYTGTSDSE DQECEFAYSD HAQNILSSLD ESIVKIDNFL TFERGFLHGD IVCPVSDPSG QLGRVVGVSM LVDLETSSGD IIKDVNSKKL
101: SRVRSFVSGD RVVMGPWIGR VIRAFDLVTL LFSDGAKCEI LLRDLDVLKP VPPILFEDAP YFYYPGQRVR IVDPSVSKSA TWLCGSWRPS RDDCIVSHVD
201: VGLVHVNWIT SVTNVWGDKS SSPSNIQDPK KLTLLSCFPY ANWQLGDWCA LMADNNGYLW MDSGKSCILS EDHKCDSHGH MYFESYGSDC SQTYVVAKTK
301: STVDVLWQNG TVSLGLEPQA LVPVSTLGDH DFWPGQYVLE KLTVEDAAKC QRTAIVRDVD ALERTVNVKW IDPAHSDTVS YGSDPAVETV SVYELVEHPD
401: FSFCTGEVVI RSAVNIDKSE ADLTNGSLAS KESLVTSSGF LSCIGNVLGY KDNGIEVQWA NGVISKVQHF EIIGLDRLLD NSSLESMNEE HTIGDSLGEA
501: EQEEMHHEIA LESTEDCTGS LCKATAFLFP KTAFDFLTNV AASLFGTRGS PSPSSVSVDP RYEIVKMAEM QPCVEELPKE KQIVKFVAQI EKPILSSEDA
601: ISKRFDVVTD CLDHHFVKEN GHESVTRGWL KKVQQEWSIL QNDLPDGIHV RVYEERMDLL RACIVGAAGT PYHDNLFFFD IFFPPDYPHE PPSVHYHSGG
701: LRLNPNLYES GKVCLSLLKT WTGTGNEVWN AENSTVLQLL LSLQALVLNE KPYFNEAGYD KFVGKADGEK NSITYNENAF LLSCKSMMYV LHKPPKHFEK
801: LVKEHFTCRS LHILDACEAY LGGDLVGHAH DKAYISEDGS KNCSTGFKIM LGKLLPKLVT AFYEAGITSD P
101: SRVRSFVSGD RVVMGPWIGR VIRAFDLVTL LFSDGAKCEI LLRDLDVLKP VPPILFEDAP YFYYPGQRVR IVDPSVSKSA TWLCGSWRPS RDDCIVSHVD
201: VGLVHVNWIT SVTNVWGDKS SSPSNIQDPK KLTLLSCFPY ANWQLGDWCA LMADNNGYLW MDSGKSCILS EDHKCDSHGH MYFESYGSDC SQTYVVAKTK
301: STVDVLWQNG TVSLGLEPQA LVPVSTLGDH DFWPGQYVLE KLTVEDAAKC QRTAIVRDVD ALERTVNVKW IDPAHSDTVS YGSDPAVETV SVYELVEHPD
401: FSFCTGEVVI RSAVNIDKSE ADLTNGSLAS KESLVTSSGF LSCIGNVLGY KDNGIEVQWA NGVISKVQHF EIIGLDRLLD NSSLESMNEE HTIGDSLGEA
501: EQEEMHHEIA LESTEDCTGS LCKATAFLFP KTAFDFLTNV AASLFGTRGS PSPSSVSVDP RYEIVKMAEM QPCVEELPKE KQIVKFVAQI EKPILSSEDA
601: ISKRFDVVTD CLDHHFVKEN GHESVTRGWL KKVQQEWSIL QNDLPDGIHV RVYEERMDLL RACIVGAAGT PYHDNLFFFD IFFPPDYPHE PPSVHYHSGG
701: LRLNPNLYES GKVCLSLLKT WTGTGNEVWN AENSTVLQLL LSLQALVLNE KPYFNEAGYD KFVGKADGEK NSITYNENAF LLSCKSMMYV LHKPPKHFEK
801: LVKEHFTCRS LHILDACEAY LGGDLVGHAH DKAYISEDGS KNCSTGFKIM LGKLLPKLVT AFYEAGITSD P
001: MEMSLTDSDW DSSSDSGSSE HEEVEFSYGG RAQNIFSNLE ETIGKIDEFL SFERGFMYGD IVRSATEPSG QSGRVINIDM FVNLESTHGK IMKEVDTKRL
101: QKLRSISLSD YVINGPWVGR VDKIVERVSV TLDDGTNYEV LVDGQDKLVA IPPNLLEDSQ YSYYPGQRVQ VKLAHAPRST TWLCGTWRGT QVMGTVCTVE
201: AGLVYVDWVA SIVMEGDRNL TAPQALQNPE SLTLLPCVSH ASWQLGDWCI LPGSSHCDIA ERQTPNVAAY NLNECHKTFQ KGFNRNMQNS GLDELFVITK
301: TKMKVAVMWQ DGSCSLGVDS QQLLPVGAVN AHDFWPEQFV VEKETCNSKK WGVVKAVNAK EQTVKVQWTI QVEKEATGCV DEVMEEIVSA YELLEHPDFG
401: FCFSDVVVKL LPEGKFDPNA DTIVATEAKH LLTESDYSGA YFLSSIGVVT GFKNGSVKVK WANGSTSKVA PCEIWKMERS EYSNSSTVSS EGSVQDLSQK
501: ISQSDEASSN HQETGLVKLY SVGESCNENI PECSSFFLPK AAIGFITNLA SSLFGYQGST SVISSHSRCN DSEDQSDSEV LVQETAESYD NSETNSGEVD
601: MTTTMVNIPI EGKGINKTLD STLLENSRNQ VRFRQFDMVN DCSDHHFLSS DKGLAQSQVT KSWVKKVQQE WSNLEANLPN TIYVRVCEER MDLLRAALVG
701: APGTPYHDGL FFFDIMLPPQ YPHEPPMVHY HSGGMRLNPN LYESGRVCLS LLNTWSGSGT EVWNAGSSSI LQLLLSFQAL VLNEKPYFNE AGYDKQLGRA
801: EGEKNSVSYN ENAFLITCKS MISMLRKPPK HFEMLVKDHF THRAQHVLAA CKAYMEGVPV GSSANLQGNS TTNSTGFKIM LSKLYPKLLE AFSEIGVDCV
901: QEIGPES
101: QKLRSISLSD YVINGPWVGR VDKIVERVSV TLDDGTNYEV LVDGQDKLVA IPPNLLEDSQ YSYYPGQRVQ VKLAHAPRST TWLCGTWRGT QVMGTVCTVE
201: AGLVYVDWVA SIVMEGDRNL TAPQALQNPE SLTLLPCVSH ASWQLGDWCI LPGSSHCDIA ERQTPNVAAY NLNECHKTFQ KGFNRNMQNS GLDELFVITK
301: TKMKVAVMWQ DGSCSLGVDS QQLLPVGAVN AHDFWPEQFV VEKETCNSKK WGVVKAVNAK EQTVKVQWTI QVEKEATGCV DEVMEEIVSA YELLEHPDFG
401: FCFSDVVVKL LPEGKFDPNA DTIVATEAKH LLTESDYSGA YFLSSIGVVT GFKNGSVKVK WANGSTSKVA PCEIWKMERS EYSNSSTVSS EGSVQDLSQK
501: ISQSDEASSN HQETGLVKLY SVGESCNENI PECSSFFLPK AAIGFITNLA SSLFGYQGST SVISSHSRCN DSEDQSDSEV LVQETAESYD NSETNSGEVD
601: MTTTMVNIPI EGKGINKTLD STLLENSRNQ VRFRQFDMVN DCSDHHFLSS DKGLAQSQVT KSWVKKVQQE WSNLEANLPN TIYVRVCEER MDLLRAALVG
701: APGTPYHDGL FFFDIMLPPQ YPHEPPMVHY HSGGMRLNPN LYESGRVCLS LLNTWSGSGT EVWNAGSSSI LQLLLSFQAL VLNEKPYFNE AGYDKQLGRA
801: EGEKNSVSYN ENAFLITCKS MISMLRKPPK HFEMLVKDHF THRAQHVLAA CKAYMEGVPV GSSANLQGNS TTNSTGFKIM LSKLYPKLLE AFSEIGVDCV
901: QEIGPES
Arabidopsis Description
UBC24Probable ubiquitin-conjugating enzyme E2 24 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY10]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.