CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P25120_001	Banana	cytosol	38.26	64.88
Os05t0557600-01	Rice	cytosol	57.99	57.76
Zm00001d009513_P003	Maize	cytosol	44.77	57.18
CDY30673	Canola	nucleus	20.32	56.91
CDY51802	Canola	cytosol	21.7	53.66
KRH26136	Soybean	cytosol	32.15	53.62
TraesCS1D01G396000.2	Wheat	cytosol, mitochondrion, nucleus	58.38	52.95
TraesCS1B01G415500.2	Wheat	nucleus	58.58	52.94
TraesCS1A01G388000.1	Wheat	cytosol, mitochondrion, nucleus	58.38	52.76
Bra036393.1-P	Field mustard	cytosol, extracellular	8.68	51.76
GSMUA_Achr6P22670_001	Banana	cytosol	45.96	50.87
HORVU1Hr1G085630.1	Barley	cytosol, nucleus	57.2	50.09
GSMUA_Achr9P00210_001	Banana	plastid	52.66	49.72
KXG33109	Sorghum	nucleus	50.3	47.75
KRH26135	Soybean	cytosol	35.11	45.76
CDY25883	Canola	cytosol	25.44	45.58
AT1G53023.1	Thale cress	cytosol	28.4	45.57
Bra038095.1-P	Field mustard	cytosol, nucleus, peroxisome	28.99	45.23
KXG31477	Sorghum	mitochondrion, plastid	32.74	45.11
Bra041020.1-P	Field mustard	plastid	28.8	44.38
CDY25884	Canola	plastid	28.21	43.2
KXG31481	Sorghum	nucleus	38.86	42.92
EES17914	Sorghum	plastid	38.86	42.83
Solyc07g053960.2.1	Tomato	nucleus	37.87	41.47
PGSC0003DMT400047166	Potato	nucleus	37.48	41.13
CDX71178	Canola	cytosol	33.33	39.21
KRH58633	Soybean	cytosol, nucleus	34.32	38.84
VIT_12s0028g03630.t01	Wine grape	nucleus	38.86	38.55
CDY55875	Canola	nucleus	31.76	37.7
Bra030965.1-P	Field mustard	nucleus	34.12	36.81
KRH42541	Soybean	nucleus	34.32	36.71
CDY47562	Canola	cytosol	34.32	36.1
CDY02528	Canola	cytosol	34.12	36.04
CDY24125	Canola	cytosol	34.52	36.01
CDY25886	Canola	cytosol	32.35	35.27
Bra040814.1-P	Field mustard	cytosol	32.35	35.27
Bra019007.1-P	Field mustard	cytosol	34.52	35.21
CDY26018	Canola	cytosol	34.32	34.25
CDX82439	Canola	cytosol	30.97	34.2
CDX75824	Canola	cytosol	31.16	33.83
Solyc10g007000.2.1	Tomato	cytosol	42.6	32.38
CDX98552	Canola	cytosol	34.32	31.99
CDX97660	Canola	cytosol	34.32	31.52
Bra027252.1-P	Field mustard	cytosol	34.12	31.45
AT1G53025.2	Thale cress	nucleus	34.52	31.42
KRH27240	Soybean	cytosol	43.0	30.97
KRH22096	Soybean	cytosol	43.98	30.84
Bra001591.1-P	Field mustard	nucleus	32.35	30.43
Bra021105.1-P	Field mustard	nucleus	35.11	29.82
CDY20117	Canola	nucleus	35.11	29.77
PGSC0003DMT400064440	Potato	nucleus	41.62	28.98
VIT_19s0014g02760.t01	Wine grape	nucleus	42.8	28.93
AT3G15355.1	Thale cress	nucleus	34.71	28.9
CDY21838	Canola	cytosol	34.91	27.27
PGSC0003DMT400039746	Potato	nucleus	38.66	27.03
Solyc12g013820.1.1	Tomato	nucleus	37.87	25.88
KRH55293	Soybean	cytosol, peroxisome, plastid	37.87	22.09
EES19930	Sorghum	cytosol	37.08	21.58
OQU79703	Sorghum	cytosol	32.54	19.12
EES02568	Sorghum	nucleus	37.08	17.0
OQU84284	Sorghum	mitochondrion, nucleus, plasma membrane, plastid	26.82	16.04

Protein Annotations

Gene3D:3.10.110.10	MapMan:35.1	EntrezGene:8074576	UniProt:C5YVG0	EnsemblPlants:EES19929	ProteinID:EES19929
ProteinID:EES19929.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031625	GO:GO:0061630
InterPro:IPR000608	InterPro:IPR016135	PFAM:PF00179	PFscan:PS50127	PANTHER:PTHR44273	PANTHER:PTHR44273:SF6
SMART:SM00212	EnsemblPlantsGene:SORBI_3009G228000	SUPFAM:SSF54495	unigene:Sbi.6156	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_enzyme/RWD
UniParc:UPI0001A8925A	RefSeq:XP_002441499.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:56910167..56914234

Molecular Weight (calculated)

57265.2 Da

IEP (calculated)

5.296

GRAVY (calculated)

-0.577

Length

507 amino acids

Sequence
(BLAST)

001: MKTRASKSYL CAGSSSFDDP DVVEVSPAAA AGWTPSHHKR KRSQVVPQEV IEIDDDDPDG VIIIADKAPV DKNKQTAVCP CPMNWPKYGK SGWFPDIPGP
101: STYASKHTDS WVDHKVFQDE AVYNYSDEYP YEGFEEDYAY DEDEFEDDGY DAPLIESEFK FGLSAKFDNL DVPPGLEASL SWTQKTAIEI ANKTKPTKAV
201: DDKIEEKYKA FKRFDTVDDH SDHYYSKPEK RRVQVVKKPS KDWVKRIQHE WKVLEKDLPD TIFVRAYEDR MDLLRAVIMG PAGTPYHDGL FFFDIYFPPQ
301: YPNVPPMVNY RAGGLRLNPN LYACGKVCLS LLNTWTGSGC EKWNPANSTM LQVLVSIQAL VLNAKPYFNE PGYAMHANTV HGEKKSLTYN EDTFLLSCRT
401: MLYSLRNPPK NFEDFVAGHF RKYGRNILVA CRAYLDGAQV GCLSGDGVQD VDEGDKSCSV RFKQSLKRLN EELLMEFTAK GADCDKFLTE KARSGASTSA
501: ADTTLRL

Best Arabidopsis Sequence Match ( AT1G53025.1 )
(BLAST)

001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR

Arabidopsis Description

Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.