Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g053960.2.1 | Tomato | nucleus | 95.24 | 95.03 |
| HORVU3Hr1G109730.1 | Barley | cytosol | 21.64 | 62.11 |
| HORVU1Hr1G090980.2 | Barley | cytosol | 24.24 | 56.0 |
| GSMUA_Achr7P25120_001 | Banana | cytosol | 34.85 | 53.85 |
| KRH58633 | Soybean | cytosol, nucleus | 51.08 | 52.68 |
| Zm00001d009007_P001 | Maize | cytosol | 26.62 | 50.2 |
| KRH42541 | Soybean | nucleus | 50.65 | 49.37 |
| TraesCS5D01G272300.1 | Wheat | cytosol, nucleus, plastid | 36.15 | 48.83 |
| VIT_12s0028g03630.t01 | Wine grape | nucleus | 52.6 | 47.55 |
| Zm00001d051483_P001 | Maize | mitochondrion, nucleus, peroxisome | 20.35 | 46.53 |
| Os01t0677500-00 | Rice | cytosol | 34.63 | 46.38 |
| Zm00001d015028_P001 | Maize | cytosol, mitochondrion, nucleus | 19.91 | 45.54 |
| HORVU2Hr1G062530.3 | Barley | cytosol | 12.55 | 44.62 |
| HORVU5Hr1G000190.3 | Barley | cytosol | 12.34 | 43.85 |
| KXG31477 | Sorghum | mitochondrion, plastid | 33.98 | 42.66 |
| TraesCS3D01G164800.2 | Wheat | mitochondrion, nucleus, plastid | 34.63 | 42.33 |
| TraesCS3A01G157200.1 | Wheat | mitochondrion, nucleus, plastid | 33.98 | 41.98 |
| TraesCS3B01G183600.1 | Wheat | mitochondrion, nucleus | 34.2 | 41.91 |
| Zm00001d039280_P005 | Maize | mitochondrion, nucleus, plastid | 33.55 | 41.55 |
| KXG31481 | Sorghum | nucleus | 41.13 | 41.39 |
| TraesCS3B01G183000.1 | Wheat | nucleus, plastid | 40.26 | 41.15 |
| Zm00001d039285_P001 | Maize | cytosol, plastid | 40.04 | 41.11 |
| GSMUA_Achr6P22670_001 | Banana | cytosol | 40.69 | 41.05 |
| TraesCS3B01G183800.2 | Wheat | nucleus | 32.68 | 41.03 |
| TraesCS3D01G164200.1 | Wheat | nucleus, plastid | 40.04 | 41.02 |
| Zm00001d047959_P001 | Maize | cytosol | 19.7 | 40.81 |
| Zm00001d009513_P003 | Maize | cytosol | 35.06 | 40.81 |
| TraesCS3A01G156300.1 | Wheat | nucleus, plastid | 40.04 | 40.75 |
| GSMUA_Achr10P... | Banana | nucleus | 41.77 | 40.55 |
| TraesCS3A01G157300.2 | Wheat | nucleus | 32.03 | 40.33 |
| TraesCS3D01G164900.3 | Wheat | nucleus | 32.03 | 40.22 |
| EES17914 | Sorghum | plastid | 40.04 | 40.22 |
| HORVU3Hr1G031950.4 | Barley | mitochondrion | 31.82 | 40.05 |
| Os05t0232500-01 | Rice | nucleus, plastid | 40.48 | 40.04 |
| Os09t0294300-01 | Rice | nucleus | 37.23 | 39.72 |
| HORVU1Hr1G029800.11 | Barley | plastid | 40.91 | 39.62 |
| TraesCS5D01G272400.1 | Wheat | nucleus | 38.74 | 39.51 |
| TraesCS5B01G264000.1 | Wheat | nucleus | 38.74 | 39.51 |
| HORVU3Hr1G031890.10 | Barley | cytosol, nucleus | 33.98 | 39.45 |
| Zm00001d049101_P001 | Maize | cytosol | 13.2 | 39.1 |
| TraesCS1A01G129500.2 | Wheat | nucleus | 41.56 | 38.95 |
| HORVU3Hr1G031730.4 | Barley | nucleus, plastid | 40.04 | 38.54 |
| GSMUA_Achr9P00210_001 | Banana | plastid | 44.37 | 38.17 |
| Os01t0232500-01 | Rice | nucleus | 39.83 | 37.94 |
| EES19929 | Sorghum | nucleus | 41.13 | 37.48 |
| PGSC0003DMT400011956 | Potato | cytosol | 25.97 | 37.38 |
| TraesCS1B01G146400.2 | Wheat | plastid | 41.34 | 36.8 |
| Os05t0557600-01 | Rice | cytosol | 40.48 | 36.74 |
| TraesCS1D01G125200.2 | Wheat | plastid | 41.13 | 36.47 |
| KXG33109 | Sorghum | nucleus | 40.48 | 35.02 |
| TraesCS3D01G269000.1 | Wheat | nucleus | 40.04 | 34.91 |
| TraesCS3B01G303300.1 | Wheat | nucleus | 39.61 | 34.53 |
| TraesCS3A01G269200.1 | Wheat | nucleus | 39.39 | 34.34 |
| TraesCS1B01G415500.2 | Wheat | nucleus | 41.56 | 34.22 |
| TraesCS1D01G396000.2 | Wheat | cytosol, mitochondrion, nucleus | 40.91 | 33.81 |
| TraesCS1A01G388000.1 | Wheat | cytosol, mitochondrion, nucleus | 40.91 | 33.69 |
| Os01t0233900-01 | Rice | mitochondrion | 33.33 | 33.12 |
| HORVU1Hr1G085630.1 | Barley | cytosol, nucleus | 41.34 | 32.99 |
| PGSC0003DMT400023282 | Potato | cytosol | 19.48 | 31.69 |
| HORVU3Hr1G062370.3 | Barley | golgi | 39.61 | 31.07 |
| PGSC0003DMT400064440 | Potato | nucleus | 45.67 | 28.98 |
| PGSC0003DMT400039746 | Potato | nucleus | 42.64 | 27.17 |
| Os01t0229900-01 | Rice | mitochondrion | 14.94 | 25.37 |
| PGSC0003DMT400076435 | Potato | nucleus | 40.48 | 20.19 |
| PGSC0003DMT400015781 | Potato | nucleus | 36.8 | 14.66 |
| Os03t0679300-01 | Rice | mitochondrion | 4.76 | 13.25 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400047166 | EnsemblPlantsGene:PGSC0003DMG400018305 | EntrezGene:102593834 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 |
| InterPro:UBQ-conjugat_E2 | InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44273 | PANTHER:PTHR44273:SF5 | PFAM:PF00179 | PFscan:PS50127 |
| PGSC:PGSC0003DMG400018305 | RefSeq:XP_006357478.1 | SEG:seg | SMART:SM00212 | SUPFAM:SSF54495 | UniParc:UPI0002953097 |
| UniProt:M1BK75 | MapMan:35.1 | : | : | : | : |
Description
Ubiquitin conjugating enzyme [Source:PGSC_GENE;Acc:PGSC0003DMG400018305]
Coordinates
chr7:-:49213720..49217601
Molecular Weight (calculated)
51114.8 Da
IEP (calculated)
4.296
GRAVY (calculated)
-0.565
Length
462 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVEIEEISA HDDSVKVKGN KEAMTEDNPD TVAGSTSGSI DSGNNNSSNS DISHHEDQND GDDGLDDCDD MSNYDDDEDY MYYDDEDDEC DYLSMQAQFD
101: NVDLPAGVEA TVSWLNEPAP SSKVSSQASS SSHLAGAQTL NPTLPEHASS SFAQVPASSN SLVSGGSNSC GKEEVTEDEL MKKYQSFKHF DVVEDFSDHH
201: YSNLGVKGQQ PPKAWSKKVQ DEWKILENDL PDTIYVRVYE ARMDLLRAVI IGPQGTPYHD GLFVFDVLFP QNYPDVPPMV YYYSGGLRLN PNLYDCGKVC
301: LSLLNTWTGK GNERWMPNSS TMLQVLVSIQ ALILNSKPFF NEPGYEASYA GPEGQRRSNS YNEDAFVLSL KTMTYTLRRP PKHFEDLVIG HFRCHAVDIL
401: SACKAYIEGA PVGSVVKGIV QDLSVTAEKS SSTFRESVSR MKNGLISLFT KNGANDCDRF RA
101: NVDLPAGVEA TVSWLNEPAP SSKVSSQASS SSHLAGAQTL NPTLPEHASS SFAQVPASSN SLVSGGSNSC GKEEVTEDEL MKKYQSFKHF DVVEDFSDHH
201: YSNLGVKGQQ PPKAWSKKVQ DEWKILENDL PDTIYVRVYE ARMDLLRAVI IGPQGTPYHD GLFVFDVLFP QNYPDVPPMV YYYSGGLRLN PNLYDCGKVC
301: LSLLNTWTGK GNERWMPNSS TMLQVLVSIQ ALILNSKPFF NEPGYEASYA GPEGQRRSNS YNEDAFVLSL KTMTYTLRRP PKHFEDLVIG HFRCHAVDIL
401: SACKAYIEGA PVGSVVKGIV QDLSVTAEKS SSTFRESVSR MKNGLISLFT KNGANDCDRF RA
001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
Arabidopsis Description
Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.