Factsheet for HORVU3Hr1G031730.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G183000.1	Wheat	nucleus, plastid	88.12	93.58
TraesCS3D01G164200.1	Wheat	nucleus, plastid	87.92	93.57
TraesCS3A01G156300.1	Wheat	nucleus, plastid	87.92	92.95
Zm00001d009007_P001	Maize	cytosol	37.29	73.06
Zm00001d039285_P001	Maize	cytosol, plastid	62.08	66.22
HORVU3Hr1G109730.1	Barley	cytosol	21.88	65.22
KXG31481	Sorghum	nucleus	61.88	64.71
Os01t0232500-01	Rice	nucleus	64.38	63.71
HORVU1Hr1G029800.11	Barley	plastid	62.29	62.68
HORVU1Hr1G090980.2	Barley	cytosol	24.17	58.0
CDY30673	Canola	nucleus	21.04	55.8
CDY51802	Canola	cytosol	21.88	51.22
Bra036393.1-P	Field mustard	cytosol, extracellular	8.75	49.41
HORVU2Hr1G062530.3	Barley	cytosol	12.92	47.69
HORVU5Hr1G000190.3	Barley	cytosol	12.71	46.92
KRH26136	Soybean	cytosol	29.58	46.71
GSMUA_Achr10P...	Banana	nucleus	43.12	43.49
AT1G53023.1	Thale cress	cytosol	28.54	43.35
CDY25883	Canola	cytosol	25.42	43.11
Bra041020.1-P	Field mustard	plastid	29.38	42.86
Bra038095.1-P	Field mustard	cytosol, nucleus, peroxisome	28.96	42.77
CDY25884	Canola	plastid	28.96	41.99
HORVU3Hr1G031890.10	Barley	cytosol, nucleus	34.58	41.71
KRH58633	Soybean	cytosol, nucleus	38.12	40.85
KRH26135	Soybean	cytosol	32.92	40.62
HORVU3Hr1G031950.4	Barley	mitochondrion	31.04	40.6
PGSC0003DMT400047166	Potato	nucleus	38.54	40.04
Solyc07g053960.2.1	Tomato	nucleus	38.54	39.96
KRH42541	Soybean	nucleus	38.54	39.03
VIT_12s0028g03630.t01	Wine grape	nucleus	38.54	36.2
HORVU1Hr1G085630.1	Barley	cytosol, nucleus	42.92	35.58
CDX71178	Canola	cytosol	30.62	34.11
CDY55875	Canola	nucleus	30.21	33.96
CDX82439	Canola	cytosol	31.67	33.12
Bra030965.1-P	Field mustard	nucleus	32.29	32.98
CDX75824	Canola	cytosol	31.88	32.76
CDY02528	Canola	cytosol	32.08	32.08
CDY47562	Canola	cytosol	32.08	31.95
Bra040814.1-P	Field mustard	cytosol	30.62	31.61
CDY25886	Canola	cytosol	30.62	31.61
CDY24125	Canola	cytosol	31.88	31.48
HORVU3Hr1G062370.3	Barley	golgi	38.54	31.41
Bra027252.1-P	Field mustard	cytosol	35.83	31.27
CDX98552	Canola	cytosol	35.42	31.25
Bra019007.1-P	Field mustard	cytosol	32.08	30.99
CDX97660	Canola	cytosol	35.62	30.98
CDY26018	Canola	cytosol	32.5	30.71
Bra001591.1-P	Field mustard	nucleus	34.38	30.61
AT1G53025.2	Thale cress	nucleus	34.79	29.98
Bra021105.1-P	Field mustard	nucleus	36.25	29.15
CDY20117	Canola	nucleus	35.83	28.76
AT3G15355.1	Thale cress	nucleus	35.42	27.91
Solyc10g007000.2.1	Tomato	cytosol	38.12	27.44
CDY21838	Canola	cytosol	36.88	27.27
KRH27240	Soybean	cytosol	39.58	26.99
KRH22096	Soybean	cytosol	40.0	26.56
PGSC0003DMT400064440	Potato	nucleus	38.12	25.14
PGSC0003DMT400039746	Potato	nucleus	37.5	24.83
VIT_19s0014g02760.t01	Wine grape	nucleus	37.08	23.73
Solyc12g013820.1.1	Tomato	nucleus	36.67	23.72
KRH55293	Soybean	cytosol, peroxisome, plastid	34.79	19.22
HORVU1Hr1G085570.2	Barley	cytosol	33.12	18.77
HORVU3Hr1G004520.2	Barley	nucleus	31.25	13.61

Protein Annotations

EnsemblPlants:HORVU3Hr1G031730.4	EnsemblPlantsGene:HORVU3Hr1G031730	Gene3D:3.10.110.10	InterPro:IPR000608	InterPro:IPR016135	InterPro:UBQ-conjugat_E2
InterPro:UBQ-conjugating_enzyme/RWD	PANTHER:PTHR44273	PANTHER:PTHR44273:SF7	PFAM:PF00179	PFscan:PS50127	SEG:seg
SMART:SM00212	SUPFAM:SSF54495	UniParc:UPI000B46C6E5	UniProt:A0A287KN81	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr3H:+:158905188..158909581

Molecular Weight (calculated)

53848.1 Da

IEP (calculated)

4.693

GRAVY (calculated)

-0.771

Length

480 amino acids

Sequence
(BLAST)

001: PAHPDRAPSP PILPSRRAQP GLRRRPWTPS CRGPQPGGSS CWATGAAAWS SSQQKRQRCE GSSSDQVGSS TSASVQMSEP ELPDIDYVEN EEEDYYMDDD
101: DDDDCDDDNG DDSEYEFDEA DFNQQLADKF DDLDLPPGVE ATVPWLQKLA ANEEQDGASD ELAEDEITKK YKAFQQFYTV EKFSDHHFAN KSVGKTSREW
201: TKRIQHDWKL LEKDLPASIF VRVAEDRMDL LRAAIIGPKG TPYHDGLFFF DAHFTSNYPS EPPLVYYHSG GLRLNPNLYN CGKVCLSLLG TWGGSGCEKW
301: NSAHSTMLQV LVSIQALILN EKPYFNEPGY AGSANTATGQ QHSIEYNKTT FLHSCRTMLY SLRRPPEHFG DLVAGHFRER GRTILAACKH YLEGNMVGSE
401: VPEEEEPEYN AYGPSSSSSS SSSNVPKKQD VMRVDPMGRR TQFSDSLKTL FEDLLMEFNV KGADTRKFLE EKVKKNLPAA

Best Arabidopsis Sequence Match ( AT1G53025.1 )
(BLAST)

001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR

Arabidopsis Description

Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.