CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plasma membrane 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040814.1-P	Field mustard	cytosol	100.0	100.0
CDY55875	Canola	nucleus	84.52	92.04
CDY30673	Canola	nucleus	33.12	85.08
CDY51802	Canola	cytosol	36.77	83.41
CDY25883	Canola	cytosol	49.46	81.27
CDY25884	Canola	plastid	55.27	77.64
CDX71178	Canola	cytosol	63.44	68.45
CDY24125	Canola	cytosol	68.17	65.23
CDY26018	Canola	cytosol	71.18	65.16
CDY47562	Canola	cytosol	67.53	65.15
CDY02528	Canola	cytosol	67.1	65.0
AT1G53023.1	Thale cress	cytosol	44.09	64.87
HORVU3Hr1G109730.1	Barley	cytosol	20.0	57.76
HORVU1Hr1G090980.2	Barley	cytosol	23.66	55.0
AT1G53025.2	Thale cress	nucleus	65.38	54.58
GSMUA_Achr7P25120_001	Banana	cytosol	31.4	48.83
KRH26136	Soybean	cytosol	30.32	46.38
Zm00001d009007_P001	Maize	cytosol	23.44	44.49
CDX82439	Canola	cytosol	42.58	43.14
CDX75824	Canola	cytosol	43.23	43.04
HORVU2Hr1G062530.3	Barley	cytosol	11.61	41.54
Zm00001d051483_P001	Maize	mitochondrion, nucleus, peroxisome	17.85	41.09
HORVU5Hr1G000190.3	Barley	cytosol	11.4	40.77
Zm00001d015028_P001	Maize	cytosol, mitochondrion, nucleus	17.63	40.59
Os01t0677500-00	Rice	cytosol	29.68	40.0
CDX98552	Canola	cytosol	46.67	39.89
KRH26135	Soybean	cytosol	33.33	39.85
TraesCS5D01G272300.1	Wheat	cytosol, nucleus, plastid	29.25	39.77
CDX97660	Canola	cytosol	46.88	39.49
TraesCS3A01G157200.1	Wheat	mitochondrion, nucleus, plastid	31.4	39.04
TraesCS3B01G183600.1	Wheat	mitochondrion, nucleus	31.61	38.99
TraesCS3D01G164800.2	Wheat	mitochondrion, nucleus, plastid	31.4	38.62
KXG31477	Sorghum	mitochondrion, plastid	30.32	38.32
TraesCS3B01G183800.2	Wheat	nucleus	29.46	37.23
Os09t0294300-01	Rice	nucleus	34.62	37.18
CDY20117	Canola	nucleus	47.74	37.12
HORVU3Hr1G031950.4	Barley	mitochondrion	29.25	37.06
Zm00001d039280_P005	Maize	mitochondrion, nucleus, plastid	29.68	37.0
HORVU3Hr1G031890.10	Barley	cytosol, nucleus	31.61	36.93
TraesCS3A01G157300.2	Wheat	nucleus	29.03	36.78
TraesCS3D01G164900.3	Wheat	nucleus	29.03	36.68
Zm00001d047959_P001	Maize	cytosol	17.2	35.87
Zm00001d009513_P003	Maize	cytosol	30.32	35.52
CDY21838	Canola	cytosol	48.39	34.67
GSMUA_Achr6P22670_001	Banana	cytosol	33.12	33.62
TraesCS3D01G164200.1	Wheat	nucleus, plastid	32.47	33.48
TraesCS3A01G156300.1	Wheat	nucleus, plastid	32.47	33.26
TraesCS3B01G183000.1	Wheat	nucleus, plastid	32.04	32.96
Os05t0557600-01	Rice	cytosol	35.91	32.81
Zm00001d039285_P001	Maize	cytosol, plastid	31.4	32.44
EES19929	Sorghum	nucleus	35.27	32.35
Zm00001d049101_P001	Maize	cytosol	10.75	32.05
KXG31481	Sorghum	nucleus	31.61	32.03
Os01t0233900-01	Rice	mitochondrion	31.83	31.83
Os01t0232500-01	Rice	nucleus	32.9	31.55
GSMUA_Achr10P...	Banana	nucleus	32.26	31.51
GSMUA_Achr9P00210_001	Banana	plastid	36.34	31.47
EES17914	Sorghum	plastid	30.97	31.3
TraesCS5D01G272400.1	Wheat	nucleus	30.32	31.13
Os05t0232500-01	Rice	nucleus, plastid	31.18	31.05
TraesCS5B01G264000.1	Wheat	nucleus	29.89	30.68
HORVU3Hr1G031730.4	Barley	nucleus, plastid	31.61	30.62
TraesCS3D01G269000.1	Wheat	nucleus	34.62	30.38
TraesCS3A01G269200.1	Wheat	nucleus	34.62	30.38
TraesCS3B01G303300.1	Wheat	nucleus	34.62	30.38
CDX72600	Canola	cytosol	7.74	30.0
KXG33109	Sorghum	nucleus	34.41	29.96
TraesCS1B01G415500.2	Wheat	nucleus	36.13	29.95
TraesCS1D01G396000.2	Wheat	cytosol, mitochondrion, nucleus	35.91	29.87
HORVU1Hr1G029800.11	Barley	plastid	30.54	29.77
TraesCS1A01G129500.2	Wheat	nucleus	31.4	29.61
TraesCS1A01G388000.1	Wheat	cytosol, mitochondrion, nucleus	35.7	29.59
HORVU1Hr1G085630.1	Barley	cytosol, nucleus	36.13	29.02
TraesCS1B01G146400.2	Wheat	plastid	31.18	27.94
Solyc10g007000.2.1	Tomato	cytosol	40.0	27.89
TraesCS1D01G125200.2	Wheat	plastid	31.18	27.83
KRH27240	Soybean	cytosol	41.72	27.56
HORVU3Hr1G062370.3	Barley	golgi	34.84	27.5
VIT_19s0014g02760.t01	Wine grape	nucleus	43.23	26.8
KRH22096	Soybean	cytosol	41.08	26.42
PGSC0003DMT400064440	Potato	nucleus	40.86	26.1
PGSC0003DMT400039746	Potato	nucleus	36.56	23.45
Solyc12g013820.1.1	Tomato	nucleus	37.2	23.32
Os01t0229900-01	Rice	mitochondrion	13.55	23.16
KRH55293	Soybean	cytosol, peroxisome, plastid	40.0	21.4
CDY42703	Canola	cytosol, mitochondrion, nucleus	27.96	19.35
CDY53783	Canola	nucleus	31.4	17.24
CDY37693	Canola	nucleus	30.97	16.65
CDX89761	Canola	nucleus	30.54	13.56
CDY02226	Canola	endoplasmic reticulum, extracellular	26.45	10.15
Os03t0679300-01	Rice	mitochondrion	3.01	8.43

Protein Annotations

EnsemblPlants:CDY25886	EnsemblPlantsGene:GSBRNA2T00033339001	Gene3D:3.10.110.10	InterPro:IPR000608	InterPro:IPR016135	InterPro:UBQ-conjugat_E2
InterPro:UBQ-conjugating_enzyme/RWD	PANTHER:PTHR44273	PANTHER:PTHR44273:SF5	PFAM:PF00179	PFscan:PS50127	ProteinID:CDY25886
ProteinID:CDY25886.1	SEG:seg	SMART:SM00212	SUPFAM:SSF54495	UniParc:UPI000253E958	UniProt:A0A078GKG1
MapMan:35.1	:	:	:	:	:

Description

BnaA05g14770DBnaA05g14770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GKG1]

Coordinates

chrLK032181:+:539617..542143

Molecular Weight (calculated)

52145.0 Da

IEP (calculated)

9.216

GRAVY (calculated)

-0.484

Length

465 amino acids

Sequence
(BLAST)

001: MEPDVVEIAP PLFPSGSRTR KPRKAGIPEV IDVEHYEFRN ANLVDKKNKG KAIQDGSLYD HLADEEVVMS TTQPWGFPSS SSKRSRRSSS ASSSRPRAAV
101: EVVVSSAQAN FLRDFKRFDT VDNFSKHHYA SQGNASKQHS RTWVKKIQAD WKILENDLPE TISVRACESR MDLLRAVIVG AEGTPYHEGL FFFDIHFPDT
201: YPSVPPMVHY HSGGLRINPN LYNCGKVCLS LLGTWNGNAR EKWLPQESTM LQLLVSIQAL ILNQKPYFNE PAYERTKGTP SGEAHSKFYS ENVYVLSLRT
301: MVYSMRKPPK HFEEFVRSHY FERAHDIVKA SNAYIDGAPV GSIVKGGVQD IEESSENGSM KFRTEVATFM KTVVEELVKL GVKELEDKLK PPPNAEGSNK
401: SNCKRSISSS INFKPSTHKA TKFMISLVFK RGNPVLDGLV DYGYHLLSSM YPTVVPKEEG GSVLS

Best Arabidopsis Sequence Match ( AT1G53023.1 )
(BLAST)

001: MVEIKDSSNV RKLKEEFLRD FKRFDTVEDF SDHHYAAEGS PAKLSLWHLK FKGRPKNWVK DIQKEWKILD KNLPETIFVR ACESRIDLLR AVIIGAEGTP
101: YHDGLFFFDI QFPDTYPSVP PKVHYHSGGL RINPNLYKCG KVCLSLISTW TGKKREKWLP KESTMLQLLV SIQALILNEK PYYNEPGYEK SMGTPLGESY
201: SKDYSENVFV FSLKTMHFEE FVRSHFFVRS HDIVKACNAY KDGAPVGSID KGGVKKQTRQ RGSLKFRINV TSFMKTVVDE FVNLGAIREA NHRGEPNPTL
301: FSCFFFCYLE LIICSV

Arabidopsis Description

UBC39Putative ubiquitin-conjugating enzyme E2 39 [Source:UniProtKB/Swiss-Prot;Acc:F4HPP7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.