CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra041020.1-P	Field mustard	plastid	91.54	92.1
CDY30673	Canola	nucleus	44.71	81.77
CDY51802	Canola	cytosol	44.41	71.71
CDY25883	Canola	cytosol	60.73	71.02
CDY55875	Canola	nucleus	77.34	59.95
AT1G53023.1	Thale cress	cytosol	56.8	59.49
CDY25886	Canola	cytosol	77.64	55.27
HORVU3Hr1G109730.1	Barley	cytosol	25.68	52.8
CDX71178	Canola	cytosol	67.98	52.2
CDY02528	Canola	cytosol	72.21	49.79
CDY47562	Canola	cytosol	72.21	49.59
HORVU1Hr1G090980.2	Barley	cytosol	29.61	49.0
CDY24125	Canola	cytosol	70.39	47.94
CDY26018	Canola	cytosol	71.9	46.85
KRH26136	Soybean	cytosol	41.69	45.39
GSMUA_Achr7P25120_001	Banana	cytosol	40.48	44.82
Zm00001d009007_P001	Maize	cytosol	31.72	42.86
AT1G53025.2	Thale cress	nucleus	67.67	40.22
KRH26135	Soybean	cytosol	47.13	40.1
TraesCS5D01G272300.1	Wheat	cytosol, nucleus, plastid	41.09	39.77
Os01t0677500-00	Rice	cytosol	38.67	37.1
Zm00001d051483_P001	Maize	mitochondrion, nucleus, peroxisome	22.36	36.63
Zm00001d015028_P001	Maize	cytosol, mitochondrion, nucleus	22.05	36.14
CDX82439	Canola	cytosol	49.85	35.95
CDX75824	Canola	cytosol	50.45	35.76
KXG31477	Sorghum	mitochondrion, plastid	39.27	35.33
HORVU5Hr1G000190.3	Barley	cytosol	13.6	34.62
HORVU2Hr1G062530.3	Barley	cytosol	13.6	34.62
TraesCS3A01G157200.1	Wheat	mitochondrion, nucleus, plastid	38.67	34.22
TraesCS3B01G183600.1	Wheat	mitochondrion, nucleus	38.97	34.22
TraesCS3D01G164800.2	Wheat	mitochondrion, nucleus, plastid	38.67	33.86
Zm00001d039280_P005	Maize	mitochondrion, nucleus, plastid	38.07	33.78
TraesCS3B01G183800.2	Wheat	nucleus	37.46	33.7
HORVU3Hr1G031950.4	Barley	mitochondrion	37.16	33.52
TraesCS3A01G157300.2	Wheat	nucleus	37.16	33.52
TraesCS3D01G164900.3	Wheat	nucleus	36.86	33.15
HORVU3Hr1G031890.10	Barley	cytosol, nucleus	39.27	32.66
CDX98552	Canola	cytosol	53.17	32.35
CDX97660	Canola	cytosol	53.47	32.07
Zm00001d047959_P001	Maize	cytosol	21.45	31.84
Zm00001d009513_P003	Maize	cytosol	38.07	31.74
Os09t0294300-01	Rice	nucleus	41.09	31.41
TraesCS3D01G164200.1	Wheat	nucleus, plastid	42.6	31.26
TraesCS3A01G156300.1	Wheat	nucleus, plastid	42.6	31.06
TraesCS3B01G183000.1	Wheat	nucleus, plastid	41.99	30.75
Zm00001d039285_P001	Maize	cytosol, plastid	41.69	30.67
KXG31481	Sorghum	nucleus	42.3	30.5
TraesCS5B01G264000.1	Wheat	nucleus	41.69	30.46
TraesCS5D01G272400.1	Wheat	nucleus	41.39	30.24
GSMUA_Achr6P22670_001	Banana	cytosol	41.69	30.13
CDY20117	Canola	nucleus	54.08	29.93
EES17914	Sorghum	plastid	41.39	29.78
Os05t0232500-01	Rice	nucleus, plastid	41.99	29.76
HORVU3Hr1G031730.4	Barley	nucleus, plastid	41.99	28.96
Os01t0232500-01	Rice	nucleus	42.3	28.87
GSMUA_Achr10P...	Banana	nucleus	41.39	28.78
HORVU1Hr1G029800.11	Barley	plastid	41.09	28.51
CDX72600	Canola	cytosol	10.27	28.33
Zm00001d049101_P001	Maize	cytosol	13.29	28.21
EES19929	Sorghum	nucleus	43.2	28.21
Os01t0233900-01	Rice	mitochondrion	39.58	28.17
TraesCS1A01G129500.2	Wheat	nucleus	41.39	27.79
Os05t0557600-01	Rice	cytosol	42.6	27.7
CDY21838	Canola	cytosol	53.78	27.43
TraesCS1B01G146400.2	Wheat	plastid	41.39	26.4
TraesCS1D01G125200.2	Wheat	plastid	41.39	26.3
GSMUA_Achr9P00210_001	Banana	plastid	42.3	26.07
TraesCS3B01G303300.1	Wheat	nucleus	41.09	25.66
TraesCS3D01G269000.1	Wheat	nucleus	41.09	25.66
TraesCS3A01G269200.1	Wheat	nucleus	41.09	25.66
KXG33109	Sorghum	nucleus	41.39	25.66
TraesCS1D01G396000.2	Wheat	cytosol, mitochondrion, nucleus	41.39	24.51
TraesCS1B01G415500.2	Wheat	nucleus	41.39	24.42
TraesCS1A01G388000.1	Wheat	cytosol, mitochondrion, nucleus	41.39	24.42
Solyc10g007000.2.1	Tomato	cytosol	48.64	24.14
KRH27240	Soybean	cytosol	50.15	23.58
HORVU1Hr1G085630.1	Barley	cytosol, nucleus	41.09	23.49
HORVU3Hr1G062370.3	Barley	golgi	41.69	23.43
KRH22096	Soybean	cytosol	49.55	22.68
PGSC0003DMT400064440	Potato	nucleus	49.24	22.39
VIT_19s0014g02760.t01	Wine grape	nucleus	49.24	21.73
Os01t0229900-01	Rice	mitochondrion	17.82	21.69
PGSC0003DMT400039746	Potato	nucleus	47.43	21.66
Solyc12g013820.1.1	Tomato	nucleus	48.34	21.56
CDY42703	Canola	cytosol, mitochondrion, nucleus	39.88	19.64
KRH55293	Soybean	cytosol, peroxisome, plastid	47.13	17.95
CDY53783	Canola	nucleus	40.79	15.94
CDY37693	Canola	nucleus	41.09	15.72
CDX89761	Canola	nucleus	40.48	12.8
CDY02226	Canola	endoplasmic reticulum, extracellular	34.74	9.49
Os03t0679300-01	Rice	mitochondrion	3.63	7.23

Protein Annotations

EnsemblPlants:CDY25884	EnsemblPlantsGene:GSBRNA2T00033336001	Gene3D:3.10.110.10	InterPro:IPR000608	InterPro:IPR016135	InterPro:UBQ-conjugat_E2
InterPro:UBQ-conjugating_enzyme/RWD	PANTHER:PTHR44273	PANTHER:PTHR44273:SF5	PFAM:PF00179	PFscan:PS50127	ProteinID:CDY25884
ProteinID:CDY25884.1	SMART:SM00212	SUPFAM:SSF54495	UniParc:UPI0004EE8C9F	UniProt:A0A078GKU5	MapMan:35.1

Description

BnaA05g14750DBnaA05g14750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GKU5]

Coordinates

chrLK032181:+:522209..523726

Molecular Weight (calculated)

37599.7 Da

IEP (calculated)

8.993

GRAVY (calculated)

-0.481

Length

331 amino acids

Sequence
(BLAST)

001: MGMSTTDQPW GCPNSSSNRT SKPSRNSSSH PRAPLEVVSS AQANFLRHFK RFDTVEDFSD HHYVSNGNAS KQHSKTWVKK VQVDWKIFLE NNLPETIFVR
101: TCESRMDLMR AVIIGAEGTP YHDGLFFFDI HFPDNYPSVP PMVHYHSGGL RINPNLYTSG KVCLSLLGTW NGNTREQWLP RESTMLQLLV SIQALILNQK
201: PYFNEPSYEQ GRLRAWGKGA WAPGPKHENV YILSLRTMVY GMRKPPKHFE EFVRSHYFER AHDIVKASNA YIEGAPVGSL VKGTSQGGSM QFRNEVAVFM
301: KTVVDEFVKL GVNELEDILE PPPVIHSNTS R

Best Arabidopsis Sequence Match ( AT1G53023.1 )
(BLAST)

001: MVEIKDSSNV RKLKEEFLRD FKRFDTVEDF SDHHYAAEGS PAKLSLWHLK FKGRPKNWVK DIQKEWKILD KNLPETIFVR ACESRIDLLR AVIIGAEGTP
101: YHDGLFFFDI QFPDTYPSVP PKVHYHSGGL RINPNLYKCG KVCLSLISTW TGKKREKWLP KESTMLQLLV SIQALILNEK PYYNEPGYEK SMGTPLGESY
201: SKDYSENVFV FSLKTMHFEE FVRSHFFVRS HDIVKACNAY KDGAPVGSID KGGVKKQTRQ RGSLKFRINV TSFMKTVVDE FVNLGAIREA NHRGEPNPTL
301: FSCFFFCYLE LIICSV

Arabidopsis Description

UBC39Putative ubiquitin-conjugating enzyme E2 39 [Source:UniProtKB/Swiss-Prot;Acc:F4HPP7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.