CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22096	Soybean	cytosol	93.75	91.29
HORVU3Hr1G109730.1	Barley	cytosol	14.35	62.73
CDY30673	Canola	nucleus	15.91	61.88
KRH26136	Soybean	cytosol	26.42	61.18
KRH26135	Soybean	cytosol	32.39	58.61
CDY51802	Canola	cytosol	16.9	58.05
HORVU1Hr1G090980.2	Barley	cytosol	16.05	56.5
Bra036393.1-P	Field mustard	cytosol, extracellular	6.82	56.47
GSMUA_Achr7P25120_001	Banana	cytosol	22.44	52.84
Bra038095.1-P	Field mustard	cytosol, nucleus, peroxisome	24.01	52.0
AT1G53023.1	Thale cress	cytosol	23.15	51.58
Bra041020.1-P	Field mustard	plastid	24.01	51.37
CDY25883	Canola	cytosol	20.45	50.88
CDY25884	Canola	plastid	23.58	50.15
Zm00001d009007_P001	Maize	cytosol	17.05	48.98
CDX71178	Canola	cytosol	28.98	47.33
GSMUA_Achr6P22670_001	Banana	cytosol	30.68	47.16
Bra030965.1-P	Field mustard	nucleus	31.25	46.81
Os01t0677500-00	Rice	cytosol	22.87	46.67
VIT_19s0014g02760.t01	Wine grape	nucleus	49.57	46.53
Os09t0294300-01	Rice	nucleus	28.55	46.42
Zm00001d015028_P001	Maize	cytosol, mitochondrion, nucleus	13.07	45.54
Zm00001d051483_P001	Maize	mitochondrion, nucleus, peroxisome	13.07	45.54
CDY47562	Canola	cytosol	31.11	45.44
CDY02528	Canola	cytosol	30.97	45.42
KRH58633	Soybean	cytosol, nucleus	28.69	45.09
TraesCS5D01G272300.1	Wheat	cytosol, nucleus, plastid	21.73	44.74
HORVU2Hr1G062530.3	Barley	cytosol	8.24	44.62
HORVU5Hr1G000190.3	Barley	cytosol	8.24	44.62
CDY55875	Canola	nucleus	26.85	44.26
CDY26018	Canola	cytosol	31.68	43.9
Zm00001d009513_P003	Maize	cytosol	24.72	43.83
CDY24125	Canola	cytosol	30.11	43.62
CDX82439	Canola	cytosol	28.41	43.57
KRH42541	Soybean	nucleus	29.26	43.46
Os05t0557600-01	Rice	cytosol	31.25	43.22
KXG31477	Sorghum	mitochondrion, plastid	22.59	43.21
Bra019007.1-P	Field mustard	cytosol	30.4	43.06
GSMUA_Achr9P00210_001	Banana	plastid	32.81	43.02
EES19929	Sorghum	nucleus	30.97	43.0
KRH50716	Soybean	nucleus	19.6	42.59
TraesCS3B01G183600.1	Wheat	mitochondrion, nucleus	22.73	42.44
TraesCS3A01G157200.1	Wheat	mitochondrion, nucleus, plastid	22.44	42.25
HORVU3Hr1G031950.4	Barley	mitochondrion	22.02	42.23
TraesCS3D01G164800.2	Wheat	mitochondrion, nucleus, plastid	22.59	42.06
CDX75824	Canola	cytosol	27.84	41.97
TraesCS3D01G164200.1	Wheat	nucleus, plastid	26.85	41.91
Bra040814.1-P	Field mustard	cytosol	27.56	41.72
CDY25886	Canola	cytosol	27.56	41.72
Zm00001d047959_P001	Maize	cytosol	13.21	41.7
TraesCS3A01G156300.1	Wheat	nucleus, plastid	26.85	41.63
TraesCS3B01G183000.1	Wheat	nucleus, plastid	26.7	41.59
TraesCS3B01G183800.2	Wheat	nucleus	21.73	41.58
TraesCS3A01G157300.2	Wheat	nucleus	21.59	41.42
KRH02368	Soybean	cytosol	17.33	41.36
Zm00001d039280_P005	Maize	mitochondrion, nucleus, plastid	21.88	41.29
TraesCS3D01G164900.3	Wheat	nucleus	21.45	41.03
Bra001591.1-P	Field mustard	nucleus	31.39	41.0
GSMUA_Achr10P...	Banana	nucleus	27.27	40.34
EES17914	Sorghum	plastid	26.14	40.0
Zm00001d039285_P001	Maize	cytosol, plastid	25.57	40.0
CDX98552	Canola	cytosol	30.82	39.89
AT1G53025.2	Thale cress	nucleus	31.53	39.86
KXG31481	Sorghum	nucleus	25.85	39.65
Os05t0232500-01	Rice	nucleus, plastid	26.28	39.61
HORVU3Hr1G031730.4	Barley	nucleus, plastid	26.99	39.58
HORVU3Hr1G031890.10	Barley	cytosol, nucleus	22.3	39.45
TraesCS1D01G396000.2	Wheat	cytosol, mitochondrion, nucleus	31.25	39.36
KRH02367	Soybean	cytosol, golgi, nucleus	18.89	39.35
TraesCS1A01G388000.1	Wheat	cytosol, mitochondrion, nucleus	31.25	39.22
KXG33109	Sorghum	nucleus	29.69	39.14
Zm00001d049101_P001	Maize	cytosol	8.66	39.1
TraesCS1B01G415500.2	Wheat	nucleus	31.11	39.04
Solyc10g007000.2.1	Tomato	cytosol	36.93	38.98
CDX97660	Canola	cytosol	30.54	38.95
Bra027252.1-P	Field mustard	cytosol	30.26	38.73
Bra021105.1-P	Field mustard	nucleus	32.67	38.53
CDY20117	Canola	nucleus	32.67	38.46
KRH02369	Soybean	cytosol	18.18	38.44
TraesCS5D01G272400.1	Wheat	nucleus	24.72	38.41
TraesCS3D01G269000.1	Wheat	nucleus	28.84	38.3
HORVU1Hr1G029800.11	Barley	plastid	25.85	38.16
TraesCS3A01G269200.1	Wheat	nucleus	28.55	37.92
TraesCS3B01G303300.1	Wheat	nucleus	28.55	37.92
HORVU1Hr1G085630.1	Barley	cytosol, nucleus	31.11	37.82
AT3G15355.1	Thale cress	nucleus	32.53	37.6
Os01t0232500-01	Rice	nucleus	25.85	37.53
TraesCS1A01G129500.2	Wheat	nucleus	26.28	37.53
TraesCS5B01G264000.1	Wheat	nucleus	23.72	36.87
TraesCS1B01G146400.2	Wheat	plastid	26.42	35.84
TraesCS1D01G125200.2	Wheat	plastid	26.42	35.7
CDY21838	Canola	cytosol	32.81	35.59
PGSC0003DMT400064440	Potato	nucleus	36.79	35.58
Os01t0233900-01	Rice	mitochondrion	23.3	35.27
HORVU3Hr1G062370.3	Barley	golgi	29.12	34.8
KRH55293	Soybean	cytosol, peroxisome, plastid	42.76	34.64
PGSC0003DMT400039746	Potato	nucleus	34.66	33.66
Solyc12g013820.1.1	Tomato	nucleus	34.66	32.88
Os01t0229900-01	Rice	mitochondrion	10.09	26.1
KRH21442	Soybean	nucleus	26.85	20.57
KRH10881	Soybean	nucleus	26.7	20.35
KRH20454	Soybean	cytosol, nucleus, peroxisome	26.7	20.15
KRH50043	Soybean	cytosol	26.42	20.06
KRG90672	Soybean	nucleus	25.14	15.75
Os03t0679300-01	Rice	mitochondrion	2.56	10.84
KRH36075	Soybean	nucleus	1.99	2.65

Protein Annotations

EntrezGene:100809853	Gene3D:3.10.110.10	MapMan:35.1	EMBL:ACUP02007788	EnsemblPlantsGene:GLYMA_12G224200	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	GO:GO:0031625	GO:GO:0061630	UniProt:I1LV04	InterPro:IPR000608
InterPro:IPR016135	EnsemblPlants:KRH27240	ProteinID:KRH27240	ProteinID:KRH27240.1	PFAM:PF00179	PFscan:PS50127
PANTHER:PTHR44273	PANTHER:PTHR44273:SF5	SMART:SM00212	SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_enzyme/RWD
UniParc:UPI0002959CC8	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:38352836..38359778

Molecular Weight (calculated)

78514.2 Da

IEP (calculated)

6.353

GRAVY (calculated)

-0.465

Length

704 amino acids

Sequence
(BLAST)

001: MDPDVIEIPP PIHHPPRFRE QNKVILHDVI DIDDDSEDVV IIGEKVNNSN KGKTIDAIHD DHQVVKTADY TYSLPAVENF GSVSGIASSN NFPSVSNNLI
101: NIDGHGSDLS YDDDDYFDIL SEDYMDVDEY ALLQKHFDNV DIPTGIEAPF TWLPPDYVVG SKKTGNNTLY PWHHMQSNAN KSPMTPSSQP SLSLEPTNSE
201: IQASSWGAIN IPIKMGNVDH SSGVELSSQY ISEPAPSKKS ATSKLRGRTS NASLGVESSK SHWSSGPFHS KKKPASTYHG FNYHAEAAKM PHAGELPYWG
301: QFKSAKKEAG SSISSLSTFI EHHGSLYPPG IESGKHWWEI SHNAKPFSTH LNNIPNHIYY PFDPLVAHPE HVFDNNWVHD SARDGFNGKT VDGPIVTITD
401: EAKEEILRKF RSFKQFDTVE DISDHHFFRS NSSMHQPPKN WAKKIQEEWR ILEKDLPASI FVRVFESRMD LLRAVIIGAE GTPYHDGLFF FDVFFPSAYP
501: NVPPKVHYHS GGLRLNPNLY ACGKVCLSLL NTWSGSKNEK WLPGVSTILQ VLVSIQGLIL NTKPYFNEPG YAHMSGSANG EKMSFQYNED TFILSLRTMM
601: YMIRKPPKNF EDFVKGHFCS RASDILVACK AYMEGAQVGC LVKGGVQDVD EGDRSCSQRF KDSLSGYMNM LVKEFAKVGA KDIEKLLPPA TTPVVNKPSG
701: LSIA

Best Arabidopsis Sequence Match ( AT1G53025.1 )
(BLAST)

001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR

Arabidopsis Description

Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.