Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036393.1-P | Field mustard | cytosol, extracellular | 18.1 | 91.76 |
| CDY30673 | Canola | nucleus | 31.09 | 74.03 |
| CDY51802 | Canola | cytosol | 33.64 | 70.73 |
| CDY55875 | Canola | nucleus | 68.45 | 69.09 |
| CDY25883 | Canola | cytosol | 44.78 | 68.2 |
| CDY25884 | Canola | plastid | 52.2 | 67.98 |
| AT1G53023.1 | Thale cress | cytosol | 47.56 | 64.87 |
| CDY02528 | Canola | cytosol | 71.93 | 64.58 |
| CDY47562 | Canola | cytosol | 71.93 | 64.32 |
| CDY24125 | Canola | cytosol | 72.39 | 64.2 |
| CDY25886 | Canola | cytosol | 68.45 | 63.44 |
| CDY26018 | Canola | cytosol | 74.48 | 63.19 |
| HORVU3Hr1G109730.1 | Barley | cytosol | 21.11 | 56.52 |
| AT1G53025.2 | Thale cress | nucleus | 71.0 | 54.94 |
| HORVU1Hr1G090980.2 | Barley | cytosol | 23.9 | 51.5 |
| GSMUA_Achr7P25120_001 | Banana | cytosol | 33.41 | 48.16 |
| KRH26136 | Soybean | cytosol | 32.48 | 46.05 |
| Zm00001d009007_P001 | Maize | cytosol | 24.83 | 43.67 |
| CDX82439 | Canola | cytosol | 46.4 | 43.57 |
| Zm00001d051483_P001 | Maize | mitochondrion, nucleus, peroxisome | 19.72 | 42.08 |
| CDX75824 | Canola | cytosol | 45.24 | 41.76 |
| Os01t0677500-00 | Rice | cytosol | 33.41 | 41.74 |
| Zm00001d015028_P001 | Maize | cytosol, mitochondrion, nucleus | 19.49 | 41.58 |
| HORVU2Hr1G062530.3 | Barley | cytosol | 12.53 | 41.54 |
| CDX98552 | Canola | cytosol | 51.97 | 41.18 |
| HORVU5Hr1G000190.3 | Barley | cytosol | 12.3 | 40.77 |
| CDX97660 | Canola | cytosol | 51.74 | 40.4 |
| KRH26135 | Soybean | cytosol | 36.43 | 40.36 |
| TraesCS5D01G272300.1 | Wheat | cytosol, nucleus, plastid | 32.02 | 40.35 |
| Os09t0294300-01 | Rice | nucleus | 38.52 | 38.34 |
| KXG31477 | Sorghum | mitochondrion, plastid | 32.71 | 38.32 |
| Zm00001d039280_P005 | Maize | mitochondrion, nucleus, plastid | 31.79 | 36.73 |
| TraesCS3A01G157200.1 | Wheat | mitochondrion, nucleus, plastid | 31.79 | 36.63 |
| CDY20117 | Canola | nucleus | 50.81 | 36.62 |
| TraesCS3B01G183600.1 | Wheat | mitochondrion, nucleus | 32.02 | 36.6 |
| Zm00001d047959_P001 | Maize | cytosol | 18.79 | 36.32 |
| GSMUA_Achr6P22670_001 | Banana | cytosol | 38.28 | 36.03 |
| TraesCS3D01G164800.2 | Wheat | mitochondrion, nucleus, plastid | 31.55 | 35.98 |
| Zm00001d009513_P003 | Maize | cytosol | 32.95 | 35.77 |
| Zm00001d049101_P001 | Maize | cytosol | 12.76 | 35.26 |
| TraesCS3A01G157300.2 | Wheat | nucleus | 29.93 | 35.15 |
| TraesCS3B01G183800.2 | Wheat | nucleus | 29.93 | 35.05 |
| HORVU3Hr1G031890.10 | Barley | cytosol, nucleus | 32.25 | 34.92 |
| HORVU3Hr1G031950.4 | Barley | mitochondrion | 29.47 | 34.6 |
| TraesCS3D01G164900.3 | Wheat | nucleus | 29.47 | 34.51 |
| CDY21838 | Canola | cytosol | 51.74 | 34.36 |
| Os05t0557600-01 | Rice | cytosol | 40.14 | 33.99 |
| Zm00001d039285_P001 | Maize | cytosol, plastid | 35.27 | 33.78 |
| GSMUA_Achr10P... | Banana | nucleus | 37.12 | 33.61 |
| EES19929 | Sorghum | nucleus | 39.21 | 33.33 |
| TraesCS3D01G164200.1 | Wheat | nucleus, plastid | 34.8 | 33.26 |
| TraesCS3A01G156300.1 | Wheat | nucleus, plastid | 34.8 | 33.04 |
| TraesCS3B01G183000.1 | Wheat | nucleus, plastid | 34.57 | 32.96 |
| GSMUA_Achr9P00210_001 | Banana | plastid | 41.07 | 32.96 |
| TraesCS3D01G269000.1 | Wheat | nucleus | 39.91 | 32.45 |
| TraesCS3A01G269200.1 | Wheat | nucleus | 39.91 | 32.45 |
| TraesCS3B01G303300.1 | Wheat | nucleus | 39.91 | 32.45 |
| KXG31481 | Sorghum | nucleus | 34.34 | 32.24 |
| EES17914 | Sorghum | plastid | 34.34 | 32.17 |
| Os05t0232500-01 | Rice | nucleus, plastid | 34.8 | 32.12 |
| TraesCS5B01G264000.1 | Wheat | nucleus | 33.64 | 32.01 |
| Os01t0232500-01 | Rice | nucleus | 35.96 | 31.96 |
| TraesCS5D01G272400.1 | Wheat | nucleus | 33.41 | 31.79 |
| KXG33109 | Sorghum | nucleus | 38.98 | 31.46 |
| TraesCS1B01G415500.2 | Wheat | nucleus | 40.14 | 30.84 |
| HORVU3Hr1G031730.4 | Barley | nucleus, plastid | 34.11 | 30.62 |
| TraesCS1D01G396000.2 | Wheat | cytosol, mitochondrion, nucleus | 39.68 | 30.59 |
| HORVU1Hr1G029800.11 | Barley | plastid | 33.64 | 30.4 |
| HORVU1Hr1G085630.1 | Barley | cytosol, nucleus | 40.84 | 30.4 |
| TraesCS1A01G388000.1 | Wheat | cytosol, mitochondrion, nucleus | 39.44 | 30.3 |
| Os01t0233900-01 | Rice | mitochondrion | 32.48 | 30.11 |
| Solyc10g007000.2.1 | Tomato | cytosol | 46.4 | 29.98 |
| TraesCS1A01G129500.2 | Wheat | nucleus | 34.11 | 29.82 |
| HORVU3Hr1G062370.3 | Barley | golgi | 39.91 | 29.2 |
| CDX72600 | Canola | cytosol | 8.12 | 29.17 |
| KRH27240 | Soybean | cytosol | 47.33 | 28.98 |
| TraesCS1D01G125200.2 | Wheat | plastid | 34.34 | 28.41 |
| TraesCS1B01G146400.2 | Wheat | plastid | 34.11 | 28.32 |
| KRH22096 | Soybean | cytosol | 46.87 | 27.94 |
| PGSC0003DMT400064440 | Potato | nucleus | 46.87 | 27.75 |
| VIT_19s0014g02760.t01 | Wine grape | nucleus | 47.33 | 27.2 |
| PGSC0003DMT400039746 | Potato | nucleus | 41.3 | 24.55 |
| Solyc12g013820.1.1 | Tomato | nucleus | 41.53 | 24.12 |
| Os01t0229900-01 | Rice | mitochondrion | 13.92 | 22.06 |
| KRH55293 | Soybean | cytosol, peroxisome, plastid | 42.69 | 21.17 |
| CDY42703 | Canola | cytosol, mitochondrion, nucleus | 30.86 | 19.79 |
| CDY53783 | Canola | nucleus | 32.71 | 16.65 |
| CDY37693 | Canola | nucleus | 32.48 | 16.18 |
| CDX89761 | Canola | nucleus | 34.57 | 14.23 |
| CDY02226 | Canola | endoplasmic reticulum, extracellular | 29.7 | 10.56 |
| Os03t0679300-01 | Rice | mitochondrion | 3.48 | 9.04 |
Protein Annotations
| EnsemblPlants:CDX71178 | EnsemblPlantsGene:GSBRNA2T00144698001 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44273 | PANTHER:PTHR44273:SF5 | PFAM:PF00179 | PFscan:PS50127 | ProteinID:CDX71178 |
| ProteinID:CDX71178.1 | SMART:SM00212 | SUPFAM:SSF54495 | UniParc:UPI0004EDAE6E | MapMan:35.1 | : |
Description
BnaC07g04570D
Coordinates
chrLK031792:-:527424..529908
Molecular Weight (calculated)
48262.4 Da
IEP (calculated)
6.841
GRAVY (calculated)
-0.367
Length
431 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPDVVEISP PPIASGSRTR KPRQAVISEV IDVEEYEFRN NVADKKNKGK AIQDTSSFDH KPFSHLASEA VPMELDDYAM FQAILNSHNI PTDVEVVMST
101: QPRSHNIAMV PSLHSGPFKV DNCATSSRLI AAEVISSAQA NFLRDFKRFD TVDDFSDHHF ASQGKASKQH AKGWVKKVQS DWKILENDLP ETIFVRACES
201: RMDLLRAVII GAEGTPYSDG LFFFDIQFSD TYPSAPPKVH YHAGGLRINP NLYNCGKVCL SLLGTWTGNT RESWIPEEST MLQLLVSIQA LILNQKPYFN
301: EPGYEQSKGT ESGELVSEAY SENIFILSLK TMVYSMRKPP KHFEEFVRSH YFMRAHDIVK ACNAYKNGAP LGSMVKGGVQ DVSETSKRGS DKFMAEVACF
401: MKTVVDEFVK LGVKELQEKQ KPLTKRSILS G
101: QPRSHNIAMV PSLHSGPFKV DNCATSSRLI AAEVISSAQA NFLRDFKRFD TVDDFSDHHF ASQGKASKQH AKGWVKKVQS DWKILENDLP ETIFVRACES
201: RMDLLRAVII GAEGTPYSDG LFFFDIQFSD TYPSAPPKVH YHAGGLRINP NLYNCGKVCL SLLGTWTGNT RESWIPEEST MLQLLVSIQA LILNQKPYFN
301: EPGYEQSKGT ESGELVSEAY SENIFILSLK TMVYSMRKPP KHFEEFVRSH YFMRAHDIVK ACNAYKNGAP LGSMVKGGVQ DVSETSKRGS DKFMAEVACF
401: MKTVVDEFVK LGVKELQEKQ KPLTKRSILS G
001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
Arabidopsis Description
Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.