Factsheet for Os05t0557600-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G396000.2	Wheat	cytosol, mitochondrion, nucleus	77.6	70.66
TraesCS1A01G388000.1	Wheat	cytosol, mitochondrion, nucleus	77.6	70.41
TraesCS1B01G415500.2	Wheat	nucleus	77.21	70.05
Os09t0294300-01	Rice	nucleus	59.33	69.75
HORVU1Hr1G085630.1	Barley	cytosol, nucleus	75.83	66.67
GSMUA_Achr7P25120_001	Banana	cytosol	38.51	65.55
Os01t0677500-00	Rice	cytosol	44.2	65.22
Zm00001d009513_P003	Maize	cytosol	49.31	63.22
GSMUA_Achr6P22670_001	Banana	cytosol	55.6	61.79
GSMUA_Achr9P00210_001	Banana	plastid	64.83	61.45
EES19929	Sorghum	nucleus	57.76	57.99
CDY30673	Canola	nucleus	20.43	57.46
CDY51802	Canola	cytosol	22.4	55.61
Bra036393.1-P	Field mustard	cytosol, extracellular	8.84	52.94
KRH26136	Soybean	cytosol	30.65	51.32
CDY25883	Canola	cytosol	26.52	47.7
Bra038095.1-P	Field mustard	cytosol, nucleus, peroxisome	30.06	47.08
AT1G53023.1	Thale cress	cytosol	28.68	46.2
Os05t0153132-00	Rice	cytosol	22.99	44.66
Os05t0232500-01	Rice	nucleus, plastid	40.67	44.33
KRH26135	Soybean	cytosol	33.79	44.22
Bra041020.1-P	Field mustard	plastid	28.49	44.07
CDY25884	Canola	plastid	27.7	42.6
Os01t0232500-01	Rice	nucleus	40.27	42.27
KRH58633	Soybean	cytosol, nucleus	35.95	40.85
PGSC0003DMT400047166	Potato	nucleus	36.74	40.48
VIT_12s0028g03630.t01	Wine grape	nucleus	40.47	40.31
Solyc07g053960.2.1	Tomato	nucleus	36.54	40.17
CDX71178	Canola	cytosol	33.99	40.14
KRH42541	Soybean	nucleus	36.94	39.66
CDY55875	Canola	nucleus	32.61	38.88
Os01t0233900-01	Rice	mitochondrion	35.17	38.49
Bra030965.1-P	Field mustard	nucleus	34.77	37.66
CDX75824	Canola	cytosol	33.99	37.05
CDY24125	Canola	cytosol	35.36	37.04
CDY47562	Canola	cytosol	34.97	36.93
CDY02528	Canola	cytosol	34.77	36.88
CDX82439	Canola	cytosol	33.01	36.6
Bra019007.1-P	Field mustard	cytosol	35.17	36.02
Bra040814.1-P	Field mustard	cytosol	32.81	35.91
CDY25886	Canola	cytosol	32.81	35.91
CDY26018	Canola	cytosol	35.76	35.83
CDX98552	Canola	cytosol	35.95	33.64
Bra001591.1-P	Field mustard	nucleus	35.56	33.58
CDX97660	Canola	cytosol	35.76	32.97
Bra027252.1-P	Field mustard	cytosol	35.56	32.91
Solyc10g007000.2.1	Tomato	cytosol	42.83	32.68
AT1G53025.2	Thale cress	nucleus	35.36	32.32
CDY20117	Canola	nucleus	37.13	31.61
Bra021105.1-P	Field mustard	nucleus	36.94	31.49
KRH27240	Soybean	cytosol	43.22	31.25
VIT_19s0014g02760.t01	Wine grape	nucleus	45.78	31.07
AT3G15355.1	Thale cress	nucleus	37.13	31.03
KRH22096	Soybean	cytosol	43.61	30.71
PGSC0003DMT400064440	Potato	nucleus	43.03	30.08
CDY21838	Canola	cytosol	37.13	29.12
Os01t0229900-01	Rice	mitochondrion	14.93	27.94
PGSC0003DMT400039746	Potato	nucleus	39.1	27.45
Solyc12g013820.1.1	Tomato	nucleus	38.7	26.55
KRH55293	Soybean	cytosol, peroxisome, plastid	37.92	22.21
Os05t0557700-01	Rice	cytosol	35.36	20.55
Os01t0125900-01	Rice	extracellular, plasma membrane	34.58	16.56
Os03t0679300-01	Rice	mitochondrion	4.32	13.25

Protein Annotations

Gene3D:3.10.110.10	MapMan:35.1	EntrezGene:4339578	ProteinID:AAT58718.1	ProteinID:BAF18204.1	ProteinID:BAS95281.1
ProteinID:EEE64653.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031625	GO:GO:0061630
InterPro:IPR000608	InterPro:IPR016135	EnsemblPlantsGene:Os05g0557600	EnsemblPlants:Os05t0557600-01	PFAM:PF00179	PFscan:PS50127
PANTHER:PTHR44273	PANTHER:PTHR44273:SF6	UniProt:Q6I602	SMART:SM00212	SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2
InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI00003B33A9	RefSeq:XP_015639534.1	SEG:seg	:	:

Description

UBIQUITIN-CONJUGATING ENZYME 41Ubiquitin-conjugating enzyme/RWD-like domain containing protein. (Os05t0557600-01)

Coordinates

chr5:-:27733895..27738318

Molecular Weight (calculated)

56870.7 Da

IEP (calculated)

4.898

GRAVY (calculated)

-0.464

Length

509 amino acids

Sequence
(BLAST)

001: MATHAPKGYL CAGSSSFDDP DVVEVTPAAA AAGGWSSGHQ KRKRSQVVPH EVIELDADDD PDGVVIIGEK SSVDKNKQAV GYPIDWLKHA KSSLAGEIAG
101: PSSYPSKNPD ILLGGLKIFQ ENPFYNNIDD YAYEAFEEDY GYDEDEYDDY DYDSTLYESE YNFTLASKFD GLDIPPGVEA PLPWLQTTAA EMANKTKPVN
201: MMDDKIDEKY SAFKQFDTVD DHSDHYYSKP DLRKVQVVKK PSKEWAKRIQ HEWKVLEKDL PDTIFVRAYE DRMDLLRAVI TGPAGTPYHD GLFFFDIYFP
301: PHYPSVPPLV NYRSGGLRLN PNLYACGKVC LSLLNTWSGS GCERWSPSNS TMLQVLVSVQ ALVLNAKPYF NEPGYAMHAN TPHGEKSSLT YNEDTFLLSC
401: RTMLYSLRNP PKHFEDFIAG HFRKYGQSIL IACRAYLDGA QVGCLVGNGV QDVDEGDKSC SARFKSALKR LFEELLMEFT VKGAECDKFL AEKAKAAASR
501: APADTTLRL

Best Arabidopsis Sequence Match ( AT3G15355.1 )
(BLAST)

001: MEPNVVEIAT PPAASCSRIR TPTKAETPEV IDVEEYDLQN GGVPNGNNVD YKNKGKAIDF DSMSYGDYGE EDEYAVGSPG DDYGYPESSP LSNSLLDPES
101: LIYEDDENYS EQYDFEMEAE PDNYSMYQDL FDGKDIPTGV EVSMDWFPNS ADKESASSSK SSHANNGNNS SKKATKASGI HSQFSSDMET PVAQPWNALP
201: HKAEGVIPNS AYALPQNSKA FQPPYAVHYS ALKTAFSNYL QPQTPDTVLG EAPAPAAGSS GLLPPNTPGF KSNAARFKEE PPILPPDDSR VKRNMEDYLG
301: LYLFFKRFDI VEDFSDHHYA SKGTTSKQHS KDWAKRIQDE WRILEKDLPE MIFVRAYESR MDLLRAVIIG AQGTPYHDGL FFFDIFFPDT YPSTPPIVHY
401: HSGGLRINPN LYNCGKVCLS LLGTWSGNQR EKWIPNTSTM LQVLVSIQGL ILNQKPYFNE PGYERSAGSA HGESTSKAYS ENTFILSLKT MVYTMRRPPK
501: YFEDFAYGHF FSCAHDVLKA CNAYRNGATP GYLVKGAPDV EENSAGMSSL KFRTDVATFV ETVLLKEFIL LGVLGLEPEE EEKTPETIIV AESSKCTRSR
601: SKRDRVSSS

Arabidopsis Description

UBC25Probable ubiquitin-conjugating enzyme E2 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUQ5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.