Factsheet for Os01t0677500-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P25120_001	Banana	cytosol	49.28	56.86
CDY30673	Canola	nucleus	27.83	53.04
Os09t0294300-01	Rice	nucleus	65.22	51.96
Bra036393.1-P	Field mustard	cytosol, extracellular	12.46	50.59
KRH26136	Soybean	cytosol	40.87	46.38
CDY51802	Canola	cytosol	26.96	45.37
GSMUA_Achr6P22670_001	Banana	cytosol	59.42	44.76
AT1G53023.1	Thale cress	cytosol	40.58	44.3
Os05t0557600-01	Rice	cytosol	65.22	44.2
TraesCS3D01G269000.1	Wheat	nucleus	65.22	42.45
TraesCS3A01G269200.1	Wheat	nucleus	65.22	42.45
KXG33109	Sorghum	nucleus	65.51	42.32
TraesCS3B01G303300.1	Wheat	nucleus	64.93	42.26
CDY25883	Canola	cytosol	33.33	40.64
GSMUA_Achr9P00210_001	Banana	plastid	62.61	40.22
Bra038095.1-P	Field mustard	cytosol, nucleus, peroxisome	37.68	40.0
Bra041020.1-P	Field mustard	plastid	37.97	39.82
KRH26135	Soybean	cytosol	44.64	39.59
Os05t0153132-00	Rice	cytosol	29.86	39.31
CDY25884	Canola	plastid	37.1	38.67
HORVU3Hr1G062370.3	Barley	golgi	64.93	38.03
Os05t0232500-01	Rice	nucleus, plastid	51.3	37.9
Os01t0233900-01	Rice	mitochondrion	48.12	35.7
Os01t0232500-01	Rice	nucleus	49.57	35.26
PGSC0003DMT400047166	Potato	nucleus	46.38	34.63
Solyc07g053960.2.1	Tomato	nucleus	46.09	34.34
KRH58633	Soybean	cytosol, nucleus	44.35	34.15
CDX71178	Canola	cytosol	41.74	33.41
KRH42541	Soybean	nucleus	44.06	32.07
CDX82439	Canola	cytosol	42.61	32.03
Bra030965.1-P	Field mustard	nucleus	42.9	31.49
CDY55875	Canola	nucleus	38.84	31.38
VIT_12s0028g03630.t01	Wine grape	nucleus	46.38	31.31
CDX75824	Canola	cytosol	42.32	31.26
CDY02528	Canola	cytosol	43.19	31.04
CDY47562	Canola	cytosol	43.19	30.91
CDY24125	Canola	cytosol	42.03	29.84
Bra040814.1-P	Field mustard	cytosol	40.0	29.68
CDY25886	Canola	cytosol	40.0	29.68
Bra019007.1-P	Field mustard	cytosol	42.61	29.58
Bra001591.1-P	Field mustard	nucleus	45.22	28.94
CDY26018	Canola	cytosol	42.61	28.94
Bra027252.1-P	Field mustard	cytosol	45.8	28.73
CDX98552	Canola	cytosol	45.22	28.68
CDX97660	Canola	cytosol	45.8	28.62
AT1G53025.2	Thale cress	nucleus	43.19	26.75
Bra021105.1-P	Field mustard	nucleus	45.22	26.13
CDY20117	Canola	nucleus	45.22	26.09
AT3G15355.1	Thale cress	nucleus	45.22	25.62
Solyc10g007000.2.1	Tomato	cytosol	48.12	24.89
Os01t0229900-01	Rice	mitochondrion	18.84	23.9
CDY21838	Canola	cytosol	44.93	23.88
PGSC0003DMT400064440	Potato	nucleus	48.41	22.94
VIT_19s0014g02760.t01	Wine grape	nucleus	49.86	22.93
KRH27240	Soybean	cytosol	46.67	22.87
KRH22096	Soybean	cytosol	46.96	22.41
PGSC0003DMT400039746	Potato	nucleus	46.67	22.21
Solyc12g013820.1.1	Tomato	nucleus	46.38	21.56
KRH55293	Soybean	cytosol, peroxisome, plastid	45.51	18.07
Os05t0557700-01	Rice	cytosol	43.48	17.12
Os01t0125900-01	Rice	extracellular, plasma membrane	42.32	13.73
Os03t0679300-01	Rice	mitochondrion	3.48	7.23

Protein Annotations

EnsemblPlants:Os01t0677500-00	EnsemblPlantsGene:Os01g0677500	Gene3D:3.10.110.10	InterPro:IPR000608	InterPro:IPR016135	InterPro:UBQ-conjugat_E2
InterPro:UBQ-conjugating_enzyme/RWD	PANTHER:PTHR44273	PANTHER:PTHR44273:SF5	PFAM:PF00179	PFscan:PS50127	ProteinID:BAS73670.1
SMART:SM00212	SUPFAM:SSF54495	UniParc:UPI000393A018	UniProt:A0A0P0V6G8	MapMan:35.1	:

Description

UBIQUITIN-CONJUGATING ENZYME 39Similar to ubiquitin-conjugating enzyme E2. (Os01t0677500-00)

Coordinates

chr1:+:27860530..27862131

Molecular Weight (calculated)

39284.2 Da

IEP (calculated)

6.985

GRAVY (calculated)

-0.314

Length

345 amino acids

Sequence
(BLAST)

001: MSLADYLKLE GSDINLNINT YYYLVALGEG GIVVEGQTSA EKPHQHKQMK HVDPKIDEKY VEFKQFDIVG DHSDHFYSNP RERKVQVVNE PGKDWVKRIQ
101: HEWKVLEKDL PDNIFVRVYE DRLELLRAVI IGPSGTPYHD GLFFFDVYFP PQYPRNPLLV IYHSGGMRLN PNLYACGKVC LSLLNTWPGD GCEKWNPSNS
201: TLQVLVSIQA LVLNAKPYFN EPGFESYANT PRAEKKSIAY NQETFLLSCK TMLYSLRNPP KHFDDFIIGH FHKYGHSILI GCNAYMDGAQ VGSIIGGVKA
301: IDKGNKGCST KFKGSLKKLF EELMMEFIGI GVDCHEFMID TTLKL

Best Arabidopsis Sequence Match ( AT3G15355.1 )
(BLAST)

001: MEPNVVEIAT PPAASCSRIR TPTKAETPEV IDVEEYDLQN GGVPNGNNVD YKNKGKAIDF DSMSYGDYGE EDEYAVGSPG DDYGYPESSP LSNSLLDPES
101: LIYEDDENYS EQYDFEMEAE PDNYSMYQDL FDGKDIPTGV EVSMDWFPNS ADKESASSSK SSHANNGNNS SKKATKASGI HSQFSSDMET PVAQPWNALP
201: HKAEGVIPNS AYALPQNSKA FQPPYAVHYS ALKTAFSNYL QPQTPDTVLG EAPAPAAGSS GLLPPNTPGF KSNAARFKEE PPILPPDDSR VKRNMEDYLG
301: LYLFFKRFDI VEDFSDHHYA SKGTTSKQHS KDWAKRIQDE WRILEKDLPE MIFVRAYESR MDLLRAVIIG AQGTPYHDGL FFFDIFFPDT YPSTPPIVHY
401: HSGGLRINPN LYNCGKVCLS LLGTWSGNQR EKWIPNTSTM LQVLVSIQGL ILNQKPYFNE PGYERSAGSA HGESTSKAYS ENTFILSLKT MVYTMRRPPK
501: YFEDFAYGHF FSCAHDVLKA CNAYRNGATP GYLVKGAPDV EENSAGMSSL KFRTDVATFV ETVLLKEFIL LGVLGLEPEE EEKTPETIIV AESSKCTRSR
601: SKRDRVSSS

Arabidopsis Description

UBC25Probable ubiquitin-conjugating enzyme E2 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUQ5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.