Factsheet for Os09t0294300-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plasma membrane 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0677500-00	Rice	cytosol	51.96	65.22
GSMUA_Achr7P25120_001	Banana	cytosol	45.03	65.22
Os05t0557600-01	Rice	cytosol	69.75	59.33
KXG33109	Sorghum	nucleus	70.44	57.12
TraesCS3A01G269200.1	Wheat	nucleus	69.75	56.98
TraesCS3B01G303300.1	Wheat	nucleus	69.52	56.79
TraesCS3D01G269000.1	Wheat	nucleus	69.28	56.6
CDY30673	Canola	nucleus	23.56	56.35
Bra036393.1-P	Field mustard	cytosol, extracellular	10.62	54.12
CDY51802	Canola	cytosol	24.48	51.71
GSMUA_Achr6P22670_001	Banana	cytosol	53.81	50.87
HORVU3Hr1G062370.3	Barley	golgi	69.05	50.76
KRH26136	Soybean	cytosol	35.57	50.66
GSMUA_Achr9P00210_001	Banana	plastid	62.36	50.28
AT1G53023.1	Thale cress	cytosol	32.56	44.62
Os05t0153132-00	Rice	cytosol	26.79	44.27
CDY25883	Canola	cytosol	28.64	43.82
Bra038095.1-P	Field mustard	cytosol, nucleus, peroxisome	32.56	43.38
KRH26135	Soybean	cytosol	38.8	43.19
Bra041020.1-P	Field mustard	plastid	31.87	41.95
CDY25884	Canola	plastid	31.41	41.09
Os01t0233900-01	Rice	mitochondrion	42.73	39.78
Os05t0232500-01	Rice	nucleus, plastid	42.26	39.19
CDX71178	Canola	cytosol	38.34	38.52
Os01t0232500-01	Rice	nucleus	42.03	37.53
PGSC0003DMT400047166	Potato	nucleus	39.72	37.23
CDY55875	Canola	nucleus	36.49	37.0
Solyc07g053960.2.1	Tomato	nucleus	39.49	36.93
VIT_12s0028g03630.t01	Wine grape	nucleus	42.96	36.4
KRH58633	Soybean	cytosol, nucleus	36.95	35.71
Bra030965.1-P	Field mustard	nucleus	38.11	35.11
KRH42541	Soybean	nucleus	38.11	34.81
Bra040814.1-P	Field mustard	cytosol	37.18	34.62
CDY25886	Canola	cytosol	37.18	34.62
CDY02528	Canola	cytosol	38.11	34.38
CDY47562	Canola	cytosol	38.11	34.23
CDY24125	Canola	cytosol	37.64	33.54
Bra019007.1-P	Field mustard	cytosol	38.34	33.4
CDX82439	Canola	cytosol	35.1	33.12
CDY26018	Canola	cytosol	38.57	32.87
CDX75824	Canola	cytosol	35.1	32.55
CDX98552	Canola	cytosol	39.03	31.07
Solyc10g007000.2.1	Tomato	cytosol	47.58	30.88
CDX97660	Canola	cytosol	39.26	30.8
Bra027252.1-P	Field mustard	cytosol	39.03	30.73
Bra001591.1-P	Field mustard	nucleus	37.41	30.06
AT1G53025.2	Thale cress	nucleus	38.57	29.98
VIT_19s0014g02760.t01	Wine grape	nucleus	49.88	28.8
KRH27240	Soybean	cytosol	46.42	28.55
CDY20117	Canola	nucleus	39.03	28.26
KRH22096	Soybean	cytosol	47.11	28.22
Bra021105.1-P	Field mustard	nucleus	38.8	28.14
Os01t0229900-01	Rice	mitochondrion	17.55	27.94
PGSC0003DMT400064440	Potato	nucleus	46.88	27.88
AT3G15355.1	Thale cress	nucleus	38.8	27.59
PGSC0003DMT400039746	Potato	nucleus	43.65	26.07
CDY21838	Canola	cytosol	38.57	25.73
Solyc12g013820.1.1	Tomato	nucleus	43.19	25.2
KRH55293	Soybean	cytosol, peroxisome, plastid	42.73	21.29
Os05t0557700-01	Rice	cytosol	37.41	18.49
Os01t0125900-01	Rice	extracellular, plasma membrane	35.8	14.58
Os03t0679300-01	Rice	mitochondrion	4.62	12.05

Protein Annotations

Gene3D:3.10.110.10	MapMan:35.1	EntrezGene:4346643	ProteinID:BAD34060.1	ProteinID:BAF24709.1	ProteinID:BAT07303.1
ProteinID:EEE69382.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031625	GO:GO:0061630
InterPro:IPR000608	InterPro:IPR016135	EnsemblPlantsGene:Os09g0294300	EnsemblPlants:Os09t0294300-01	PFAM:PF00179	PFscan:PS50127
PANTHER:PTHR44273	PANTHER:PTHR44273:SF5	UniProt:Q69LG5	SMART:SM00212	SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2
InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI00003FF505	RefSeq:XP_015610951.1	SEG:seg	:	:

Description

UBIQUITIN-CONJUGATING ENZYME 40Ubiquitin-conjugating enzyme/RWD-like domain containing protein. (Os09t0294300-01)

Coordinates

chr9:-:7017626..7020961

Molecular Weight (calculated)

48347.3 Da

IEP (calculated)

8.648

GRAVY (calculated)

-0.570

Length

433 amino acids

Sequence
(BLAST)

001: MAEGEGSSSR RWALGDPDVV EVSPEAAAAA RWSSARLKRK RTTVAHEIID LDANDDPDGV MIICEKASSH KSNHSVSHPS DWPKHPKSGL AEDVPGPSHQ
101: PGTSTVLPWG CTTPGRPRKH KEIKTVDNKI DEKYKAFKQF DTVTDHSDHY YSMSGKGNVP EVKKPSKDWV RRIQHEWKVL EKDLPGTIFV RVYEDRMELL
201: RAVIVGPAGT PYHDGLFFFD VYFPSQYPKK PPLVNYRSGG LRLNPNLYDS GKVCLSLLNT WSGHGCEKWN PSNSTMLQVL VSIQALVLNA KPYFNEPGYA
301: ASANTPQGEK MSMAYNESTF LLSCRTMLYS LRNPPKHFED FARVHFCKYG RNILVGCKAY MNGAQVGCLA GNGVQDVDEG DKSCSANFKG SLKTLFDELI
401: KEFTRIGVHC HEFQPQRVNP GSTRAKADTT LRL

Best Arabidopsis Sequence Match ( AT3G15355.1 )
(BLAST)

001: MEPNVVEIAT PPAASCSRIR TPTKAETPEV IDVEEYDLQN GGVPNGNNVD YKNKGKAIDF DSMSYGDYGE EDEYAVGSPG DDYGYPESSP LSNSLLDPES
101: LIYEDDENYS EQYDFEMEAE PDNYSMYQDL FDGKDIPTGV EVSMDWFPNS ADKESASSSK SSHANNGNNS SKKATKASGI HSQFSSDMET PVAQPWNALP
201: HKAEGVIPNS AYALPQNSKA FQPPYAVHYS ALKTAFSNYL QPQTPDTVLG EAPAPAAGSS GLLPPNTPGF KSNAARFKEE PPILPPDDSR VKRNMEDYLG
301: LYLFFKRFDI VEDFSDHHYA SKGTTSKQHS KDWAKRIQDE WRILEKDLPE MIFVRAYESR MDLLRAVIIG AQGTPYHDGL FFFDIFFPDT YPSTPPIVHY
401: HSGGLRINPN LYNCGKVCLS LLGTWSGNQR EKWIPNTSTM LQVLVSIQGL ILNQKPYFNE PGYERSAGSA HGESTSKAYS ENTFILSLKT MVYTMRRPPK
501: YFEDFAYGHF FSCAHDVLKA CNAYRNGATP GYLVKGAPDV EENSAGMSSL KFRTDVATFV ETVLLKEFIL LGVLGLEPEE EEKTPETIIV AESSKCTRSR
601: SKRDRVSSS

Arabidopsis Description

UBC25Probable ubiquitin-conjugating enzyme E2 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUQ5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.