Factsheet for Os01t0233900-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G109730.1	Barley	cytosol	26.88	77.64
HORVU1Hr1G090980.2	Barley	cytosol	31.18	72.5
KXG31477	Sorghum	mitochondrion, plastid	56.34	71.2
TraesCS3A01G157200.1	Wheat	mitochondrion, nucleus, plastid	57.2	71.12
TraesCS3B01G183600.1	Wheat	mitochondrion, nucleus	57.63	71.09
TraesCS3D01G164800.2	Wheat	mitochondrion, nucleus, plastid	57.63	70.9
TraesCS3D01G164900.3	Wheat	nucleus	55.48	70.11
TraesCS3B01G183800.2	Wheat	nucleus	55.27	69.84
HORVU3Hr1G031950.4	Barley	mitochondrion	55.05	69.75
TraesCS3A01G157300.2	Wheat	nucleus	54.41	68.94
Zm00001d039280_P005	Maize	mitochondrion, nucleus, plastid	53.76	67.02
Zm00001d051483_P001	Maize	mitochondrion, nucleus, peroxisome	27.96	64.36
HORVU3Hr1G031890.10	Barley	cytosol, nucleus	55.05	64.32
HORVU5Hr1G000190.3	Barley	cytosol	17.85	63.85
HORVU2Hr1G062530.3	Barley	cytosol	17.63	63.08
Zm00001d015028_P001	Maize	cytosol, mitochondrion, nucleus	27.31	62.87
Zm00001d047959_P001	Maize	cytosol	28.17	58.74
Zm00001d049101_P001	Maize	cytosol	19.14	57.05
CDY30673	Canola	nucleus	21.51	55.25
Bra036393.1-P	Field mustard	cytosol, extracellular	9.46	51.76
CDY51802	Canola	cytosol	21.94	49.76
Os01t0677500-00	Rice	cytosol	35.7	48.12
KRH26136	Soybean	cytosol	29.46	45.07
AT1G53023.1	Thale cress	cytosol	30.32	44.62
Os09t0294300-01	Rice	nucleus	39.78	42.73
Bra038095.1-P	Field mustard	cytosol, nucleus, peroxisome	28.82	41.23
CDY25883	Canola	cytosol	24.95	40.99
Os05t0153132-00	Rice	cytosol	23.01	40.84
Bra041020.1-P	Field mustard	plastid	28.82	40.73
CDY25884	Canola	plastid	28.17	39.58
KRH26135	Soybean	cytosol	32.47	38.82
Os01t0229900-01	Rice	mitochondrion	22.37	38.24
GSMUA_Achr10P...	Banana	nucleus	37.2	36.34
Os05t0232500-01	Rice	nucleus, plastid	35.7	35.55
Os05t0557600-01	Rice	cytosol	38.49	35.17
KRH58633	Soybean	cytosol, nucleus	32.26	33.48
PGSC0003DMT400047166	Potato	nucleus	33.12	33.33
CDY55875	Canola	nucleus	30.54	33.26
Solyc07g053960.2.1	Tomato	nucleus	32.9	33.05
Os01t0232500-01	Rice	nucleus	34.41	32.99
KRH42541	Soybean	nucleus	33.12	32.49
CDX71178	Canola	cytosol	30.11	32.48
Bra040814.1-P	Field mustard	cytosol	31.83	31.83
CDY25886	Canola	cytosol	31.83	31.83
Bra030965.1-P	Field mustard	nucleus	32.04	31.7
CDY02528	Canola	cytosol	32.26	31.25
CDY47562	Canola	cytosol	32.26	31.12
VIT_12s0028g03630.t01	Wine grape	nucleus	33.55	30.53
CDX82439	Canola	cytosol	29.89	30.28
CDY24125	Canola	cytosol	31.61	30.25
CDX75824	Canola	cytosol	29.89	29.76
Bra019007.1-P	Field mustard	cytosol	31.4	29.38
CDY26018	Canola	cytosol	31.4	28.74
CDX98552	Canola	cytosol	32.04	27.39
Bra027252.1-P	Field mustard	cytosol	32.26	27.27
CDX97660	Canola	cytosol	32.26	27.17
Bra001591.1-P	Field mustard	nucleus	31.4	27.09
AT1G53025.2	Thale cress	nucleus	32.04	26.75
AT3G15355.1	Thale cress	nucleus	32.9	25.12
Bra021105.1-P	Field mustard	nucleus	31.61	24.62
CDY20117	Canola	nucleus	31.61	24.58
KRH22096	Soybean	cytosol	36.34	23.37
KRH27240	Soybean	cytosol	35.27	23.3
Solyc10g007000.2.1	Tomato	cytosol	33.12	23.09
CDY21838	Canola	cytosol	31.4	22.5
VIT_19s0014g02760.t01	Wine grape	nucleus	35.27	21.87
PGSC0003DMT400039746	Potato	nucleus	33.12	21.24
PGSC0003DMT400064440	Potato	nucleus	32.69	20.88
Solyc12g013820.1.1	Tomato	nucleus	32.9	20.62
Os03t0679300-01	Rice	mitochondrion	7.31	20.48
KRH55293	Soybean	cytosol, peroxisome, plastid	34.84	18.64
Os05t0557700-01	Rice	cytosol	33.33	17.69
Os01t0125900-01	Rice	extracellular, plasma membrane	31.18	13.64

Protein Annotations

Gene3D:3.10.110.10	MapMan:35.1	UniProt:A0A0N7KCM1	ProteinID:BAS71201.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	GO:GO:0031625	GO:GO:0061630	InterPro:IPR000608	InterPro:IPR016135	EnsemblPlantsGene:Os01g0233900
EnsemblPlants:Os01t0233900-01	PFAM:PF00179	PFscan:PS50127	PANTHER:PTHR44273	PANTHER:PTHR44273:SF1	SMART:SM00212
SUPFAM:SSF54495	SignalP:SignalP-noTM	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI0003939CAA	SEG:seg

Description

UBIQUITIN-CONJUGATING ENZYME 37Similar to cDNA clone:J013003E06, full insert sequence. (Os01t0233900-01)

Coordinates

chr1:-:7404911..7409638

Molecular Weight (calculated)

51749.8 Da

IEP (calculated)

9.725

GRAVY (calculated)

-0.432

Length

465 amino acids

Sequence
(BLAST)

001: GSFPRGARKG AVHPLLAAIA PLSLAEVVEA TQQQQQQQVS LCPSPLLLLP PAVSSPPTAT KTLLLRPLST AERDHHLRQT RGAFRVKRVL RMVLNKVLEL
101: FCVKKKDSKK KGKAINPLCK VAAPHPTANV STNNSLLDPF SSGNGTVLLV QKHEPECSSV VSSMTRTEYG SESDGYNLFN QFDVVQDFSD HYYAKNSPGK
201: TSKDWVKTIQ NEWKLLQKDL PESIYVRAYE DRIDLLRAAI VGPAGTPYHD GLFFFDVRFP SEYPQSPPKV HYHSGGLRLN PNLYESGKVC LSLLNTWWGT
301: GCEKWGKSKS TILQVLVSIQ GLVLNDKPYF NEPGNKNSAN TAPGEKYSLA YNQTAFLLSC RTMMYSLRKP PKHFESLVAR HFHERERVIL DACDAYISGA
401: VVGSSSAKGT KHPRDNNRSF ADFKKSLEKY SELLRKDLAA NRTHFLKLTR DSPAAADEIV ECTSS

Best Arabidopsis Sequence Match ( AT1G53023.1 )
(BLAST)

001: MVEIKDSSNV RKLKEEFLRD FKRFDTVEDF SDHHYAAEGS PAKLSLWHLK FKGRPKNWVK DIQKEWKILD KNLPETIFVR ACESRIDLLR AVIIGAEGTP
101: YHDGLFFFDI QFPDTYPSVP PKVHYHSGGL RINPNLYKCG KVCLSLISTW TGKKREKWLP KESTMLQLLV SIQALILNEK PYYNEPGYEK SMGTPLGESY
201: SKDYSENVFV FSLKTMHFEE FVRSHFFVRS HDIVKACNAY KDGAPVGSID KGGVKKQTRQ RGSLKFRINV TSFMKTVVDE FVNLGAIREA NHRGEPNPTL
301: FSCFFFCYLE LIICSV

Arabidopsis Description

UBC39Putative ubiquitin-conjugating enzyme E2 39 [Source:UniProtKB/Swiss-Prot;Acc:F4HPP7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.