Factsheet for Bra001591.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82439	Canola	cytosol	80.7	94.77
Bra021105.1-P	Field mustard	nucleus	77.92	70.35
Bra027252.1-P	Field mustard	cytosol	67.35	66.0
Bra036393.1-P	Field mustard	cytosol, extracellular	9.83	62.35
HORVU3Hr1G109730.1	Barley	cytosol	17.81	59.63
Bra038095.1-P	Field mustard	cytosol, nucleus, peroxisome	34.69	57.54
Bra041020.1-P	Field mustard	plastid	35.06	57.45
AT3G15355.1	Thale cress	nucleus	63.08	55.83
HORVU1Hr1G090980.2	Barley	cytosol	19.3	52.0
GSMUA_Achr7P25120_001	Banana	cytosol	27.64	49.83
KRH26136	Soybean	cytosol	27.27	48.36
Bra019007.1-P	Field mustard	cytosol	43.97	47.69
Bra030965.1-P	Field mustard	nucleus	41.0	47.02
Bra040814.1-P	Field mustard	cytosol	40.45	46.88
Zm00001d009007_P001	Maize	cytosol	20.96	46.12
Os01t0677500-00	Rice	cytosol	28.94	45.22
TraesCS5D01G272300.1	Wheat	cytosol, nucleus, plastid	27.09	42.69
KRH26135	Soybean	cytosol	30.61	42.42
Zm00001d015028_P001	Maize	cytosol, mitochondrion, nucleus	15.4	41.09
Zm00001d051483_P001	Maize	mitochondrion, nucleus, peroxisome	15.4	41.09
HORVU2Hr1G062530.3	Barley	cytosol	9.83	40.77
Zm00001d009513_P003	Maize	cytosol	29.68	40.3
HORVU5Hr1G000190.3	Barley	cytosol	9.65	40.0
TraesCS3B01G183600.1	Wheat	mitochondrion, nucleus	27.64	39.52
TraesCS3D01G164800.2	Wheat	mitochondrion, nucleus, plastid	27.64	39.42
KXG31477	Sorghum	mitochondrion, plastid	26.9	39.4
TraesCS3A01G157200.1	Wheat	mitochondrion, nucleus, plastid	27.27	39.3
GSMUA_Achr6P22670_001	Banana	cytosol	32.47	38.21
Zm00001d039280_P005	Maize	mitochondrion, nucleus, plastid	26.16	37.8
HORVU3Hr1G031950.4	Barley	mitochondrion	25.6	37.6
TraesCS3A01G157300.2	Wheat	nucleus	25.6	37.6
Os09t0294300-01	Rice	nucleus	30.06	37.41
TraesCS3D01G164900.3	Wheat	nucleus	25.42	37.23
TraesCS3B01G183800.2	Wheat	nucleus	25.42	37.23
TraesCS3B01G183000.1	Wheat	nucleus, plastid	31.17	37.17
TraesCS3D01G164200.1	Wheat	nucleus, plastid	30.98	37.03
TraesCS3A01G156300.1	Wheat	nucleus, plastid	31.17	37.0
HORVU3Hr1G031890.10	Barley	cytosol, nucleus	27.27	36.93
EES17914	Sorghum	plastid	31.35	36.74
Zm00001d039285_P001	Maize	cytosol, plastid	30.61	36.67
TraesCS5D01G272400.1	Wheat	nucleus	30.8	36.64
Zm00001d047959_P001	Maize	cytosol	15.03	36.32
Os05t0232500-01	Rice	nucleus, plastid	31.35	36.19
TraesCS5B01G264000.1	Wheat	nucleus	30.06	35.76
GSMUA_Achr10P...	Banana	nucleus	31.54	35.71
Os05t0557600-01	Rice	cytosol	33.58	35.56
KXG31481	Sorghum	nucleus	30.24	35.51
HORVU1Hr1G029800.11	Barley	plastid	31.17	35.22
Os01t0232500-01	Rice	nucleus	31.35	34.85
HORVU3Hr1G031730.4	Barley	nucleus, plastid	30.61	34.38
GSMUA_Achr9P00210_001	Banana	plastid	33.95	34.08
TraesCS1A01G129500.2	Wheat	nucleus	31.17	34.08
Zm00001d049101_P001	Maize	cytosol	9.65	33.33
TraesCS1B01G146400.2	Wheat	plastid	31.17	32.37
EES19929	Sorghum	nucleus	30.43	32.35
TraesCS1D01G125200.2	Wheat	plastid	31.17	32.25
KXG33109	Sorghum	nucleus	31.91	32.21
TraesCS1B01G415500.2	Wheat	nucleus	33.21	31.91
TraesCS3A01G269200.1	Wheat	nucleus	31.35	31.89
TraesCS3B01G303300.1	Wheat	nucleus	31.17	31.7
TraesCS3D01G269000.1	Wheat	nucleus	31.17	31.7
TraesCS1D01G396000.2	Wheat	cytosol, mitochondrion, nucleus	32.84	31.66
TraesCS1A01G388000.1	Wheat	cytosol, mitochondrion, nucleus	32.84	31.55
Os01t0233900-01	Rice	mitochondrion	27.09	31.4
KRH27240	Soybean	cytosol	41.0	31.39
HORVU1Hr1G085630.1	Barley	cytosol, nucleus	33.58	31.26
VIT_19s0014g02760.t01	Wine grape	nucleus	42.67	30.67
Solyc10g007000.2.1	Tomato	cytosol	37.29	30.13
KRH22096	Soybean	cytosol	40.26	30.01
PGSC0003DMT400064440	Potato	nucleus	38.59	28.57
HORVU3Hr1G062370.3	Barley	golgi	31.17	28.52
PGSC0003DMT400039746	Potato	nucleus	37.48	27.86
Solyc12g013820.1.1	Tomato	nucleus	38.22	27.76
Os01t0229900-01	Rice	mitochondrion	12.99	25.74
KRH55293	Soybean	cytosol, peroxisome, plastid	35.44	21.98
Bra021874.1-P	Field mustard	nucleus	27.46	17.11
Bra017778.1-P	Field mustard	cytosol	26.53	15.98
Bra013040.1-P	Field mustard	cytosol, extracellular, mitochondrion, nucleus	25.23	10.94
Os03t0679300-01	Rice	mitochondrion	3.34	10.84

Protein Annotations

EnsemblPlants:Bra001591.1	EnsemblPlants:Bra001591.1-P	EnsemblPlantsGene:Bra001591	Gene3D:3.10.110.10	InterPro:IPR000608	InterPro:IPR016135
InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_enzyme/RWD	ncoils:Coil	PANTHER:PTHR44273	PANTHER:PTHR44273:SF5	PFAM:PF00179
PFscan:PS50127	SEG:seg	SMART:SM00212	SUPFAM:SSF54495	UniParc:UPI0002540A3D	UniProt:M4CBL1
MapMan:35.1	:	:	:	:	:

Description

AT3G15355 (E=4e-137) UBC25, PFU1 | UBC25 (UBIQUITIN-CONJUGATING ENZYME 25); small conjugating protein ligase

Coordinates

chrA03:+:17239373..17241429

Molecular Weight (calculated)

60265.2 Da

IEP (calculated)

4.763

GRAVY (calculated)

-0.665

Length

539 amino acids

Sequence
(BLAST)

001: MQNGGVLDNN NVDNKNKGKA IQLGSLSEDD HQLEESASEG YDTTHNDESD PGSSPQSDSL LDPDALIYED DSDHYGYEME LEEEEEEEEE EADDYVSEYQ
101: ALFDAKEKEL PAGVEVTMDW LPNSKSSGSN KSSREDHGIK LEATSSSKKP KKLPHNSKGF TPNSAYALPQ IYLDPQAPVP VPAPAVPAPA SSTVLLPTQN
201: NPKGIYNARP DVQEVISDSN TCRVKRNMDD YLGKFVFFKR FDIVEDLVDH QYASKGTASK KHSKEWAKRI QEEWRTLEND LPEMIFVRAY ESRMDLLRAV
301: IIGADGTPYH DGLFFFDIFF PDTYPSVPPV VHYHSGGLRI NPNLYNSGKV CLSLLGTWSG AASQMWIPTK STMLQVLVSI QGLILNEKPY FNEPGLARTA
401: GSPSGERQSK AYSENTFLLS LKTMVYNMRR PPKYFEDFSY GHFFSCAHDV LKACNAYRNR APVASLVRGK VKEGDESNER CSEKFRTDVA TFVDTILLKE
501: FILLGVLGLE PEEEDKPSET KVAESSRSKR PKRGGVSSK

Best Arabidopsis Sequence Match ( AT3G15355.1 )
(BLAST)

001: MEPNVVEIAT PPAASCSRIR TPTKAETPEV IDVEEYDLQN GGVPNGNNVD YKNKGKAIDF DSMSYGDYGE EDEYAVGSPG DDYGYPESSP LSNSLLDPES
101: LIYEDDENYS EQYDFEMEAE PDNYSMYQDL FDGKDIPTGV EVSMDWFPNS ADKESASSSK SSHANNGNNS SKKATKASGI HSQFSSDMET PVAQPWNALP
201: HKAEGVIPNS AYALPQNSKA FQPPYAVHYS ALKTAFSNYL QPQTPDTVLG EAPAPAAGSS GLLPPNTPGF KSNAARFKEE PPILPPDDSR VKRNMEDYLG
301: LYLFFKRFDI VEDFSDHHYA SKGTTSKQHS KDWAKRIQDE WRILEKDLPE MIFVRAYESR MDLLRAVIIG AQGTPYHDGL FFFDIFFPDT YPSTPPIVHY
401: HSGGLRINPN LYNCGKVCLS LLGTWSGNQR EKWIPNTSTM LQVLVSIQGL ILNQKPYFNE PGYERSAGSA HGESTSKAYS ENTFILSLKT MVYTMRRPPK
501: YFEDFAYGHF FSCAHDVLKA CNAYRNGATP GYLVKGAPDV EENSAGMSSL KFRTDVATFV ETVLLKEFIL LGVLGLEPEE EEKTPETIIV AESSKCTRSR
601: SKRDRVSSS

Arabidopsis Description

UBC25Probable ubiquitin-conjugating enzyme E2 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUQ5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.