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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • plasma membrane 1
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
EpiLoc:plasma membrane
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY24125 Canola cytosol 93.76 95.88
Bra036393.1-P Field mustard cytosol, extracellular 13.48 78.82
Bra038095.1-P Field mustard cytosol, nucleus, peroxisome 49.9 76.31
Bra030965.1-P Field mustard nucleus 71.83 75.96
Bra041020.1-P Field mustard plastid 49.9 75.38
Bra040814.1-P Field mustard cytosol 66.4 70.97
AT1G53023.1 Thale cress cytosol 42.45 66.77
AT1G53025.2 Thale cress nucleus 70.42 62.84
HORVU3Hr1G109730.1 Barley cytosol 18.91 58.39
HORVU1Hr1G090980.2 Barley cytosol 22.13 55.0
GSMUA_Achr7P25120_001 Banana cytosol 28.77 47.83
KRH26136 Soybean cytosol 28.57 46.71
Zm00001d009007_P001 Maize cytosol 22.33 45.31
Bra001591.1-P Field mustard nucleus 47.69 43.97
Bra027252.1-P Field mustard cytosol 47.48 42.91
Os01t0677500-00 Rice cytosol 29.58 42.61
TraesCS5D01G272300.1 Wheat cytosol, nucleus, plastid 28.77 41.81
Bra021105.1-P Field mustard nucleus 49.09 40.87
HORVU2Hr1G062530.3 Barley cytosol 10.66 40.77
KRH26135 Soybean cytosol 31.39 40.1
HORVU5Hr1G000190.3 Barley cytosol 10.46 40.0
Zm00001d051483_P001 Maize mitochondrion, nucleus, peroxisome 16.1 39.6
TraesCS3D01G164800.2 Wheat mitochondrion, nucleus, plastid 29.98 39.42
KXG31477 Sorghum mitochondrion, plastid 28.97 39.13
Zm00001d015028_P001 Maize cytosol, mitochondrion, nucleus 15.9 39.11
TraesCS3A01G157200.1 Wheat mitochondrion, nucleus, plastid 29.18 38.77
TraesCS3B01G183600.1 Wheat mitochondrion, nucleus 29.38 38.73
Os09t0294300-01 Rice nucleus 33.4 38.34
Zm00001d009513_P003 Maize cytosol 29.98 37.53
TraesCS3B01G183800.2 Wheat nucleus 27.57 37.23
HORVU3Hr1G031890.10 Barley cytosol, nucleus 29.78 37.19
TraesCS3A01G157300.2 Wheat nucleus 27.36 37.06
HORVU3Hr1G031950.4 Barley mitochondrion 27.36 37.06
Zm00001d039280_P005 Maize mitochondrion, nucleus, plastid 27.57 36.73
TraesCS3D01G164900.3 Wheat nucleus 27.16 36.68
GSMUA_Achr6P22670_001 Banana cytosol 33.2 36.03
Os05t0557600-01 Rice cytosol 36.02 35.17
TraesCS3D01G164200.1 Wheat nucleus, plastid 31.39 34.59
EES19929 Sorghum nucleus 35.21 34.52
TraesCS3B01G183000.1 Wheat nucleus, plastid 31.19 34.29
Zm00001d039285_P001 Maize cytosol, plastid 30.99 34.22
Zm00001d047959_P001 Maize cytosol 15.29 34.08
TraesCS3A01G156300.1 Wheat nucleus, plastid 30.99 33.92
GSMUA_Achr10P... Banana nucleus 32.39 33.82
GSMUA_Achr9P00210_001 Banana plastid 36.42 33.71
Os05t0232500-01 Rice nucleus, plastid 31.39 33.4
TraesCS3A01G269200.1 Wheat nucleus 35.61 33.4
TraesCS3D01G269000.1 Wheat nucleus 35.61 33.4
TraesCS3B01G303300.1 Wheat nucleus 35.41 33.21
KXG31481 Sorghum nucleus 30.58 33.12
TraesCS5D01G272400.1 Wheat nucleus 30.18 33.11
TraesCS5B01G264000.1 Wheat nucleus 29.98 32.89
EES17914 Sorghum plastid 30.38 32.83
KXG33109 Sorghum nucleus 34.81 32.4
Os01t0232500-01 Rice nucleus 31.59 32.37
HORVU1Hr1G029800.11 Barley plastid 30.99 32.29
HORVU3Hr1G031730.4 Barley nucleus, plastid 30.99 32.08
TraesCS1A01G129500.2 Wheat nucleus 31.59 31.85
TraesCS1B01G415500.2 Wheat nucleus 35.61 31.55
TraesCS1D01G396000.2 Wheat cytosol, mitochondrion, nucleus 35.41 31.48
Zm00001d049101_P001 Maize cytosol 9.86 31.41
Os01t0233900-01 Rice mitochondrion 29.38 31.4
TraesCS1A01G388000.1 Wheat cytosol, mitochondrion, nucleus 35.01 31.02
Solyc10g007000.2.1 Tomato cytosol 41.25 30.73
HORVU1Hr1G085630.1 Barley cytosol, nucleus 35.61 30.57
KRH27240 Soybean cytosol 43.06 30.4
HORVU3Hr1G062370.3 Barley golgi 35.81 30.22
TraesCS1B01G146400.2 Wheat plastid 31.39 30.06
TraesCS1D01G125200.2 Wheat plastid 31.39 29.94
VIT_19s0014g02760.t01 Wine grape nucleus 44.47 29.47
KRH22096 Soybean cytosol 42.66 29.32
PGSC0003DMT400064440 Potato nucleus 42.05 28.71
PGSC0003DMT400039746 Potato nucleus 38.23 26.21
Solyc12g013820.1.1 Tomato nucleus 38.63 25.88
Os01t0229900-01 Rice mitochondrion 13.08 23.9
KRH55293 Soybean cytosol, peroxisome, plastid 38.63 22.09
Bra021874.1-P Field mustard nucleus 30.58 17.57
Bra017778.1-P Field mustard cytosol 28.17 15.64
Bra013040.1-P Field mustard cytosol, extracellular, mitochondrion, nucleus 26.36 10.54
Os03t0679300-01 Rice mitochondrion 3.22 9.64
Protein Annotations
EnsemblPlants:Bra019007.1EnsemblPlants:Bra019007.1-PEnsemblPlantsGene:Bra019007Gene3D:3.10.110.10InterPro:IPR000608InterPro:IPR016135
InterPro:UBQ-conjugat_E2InterPro:UBQ-conjugating_enzyme/RWDPANTHER:PTHR44273PANTHER:PTHR44273:SF5PFAM:PF00179PFscan:PS50127
SEG:segSMART:SM00212SUPFAM:SSF54495UniParc:UPI000253E80BUniProt:M4DR64MapMan:35.1
Description
AT1G53020 (E=2e-132) UBC26, PFU3 | UBC26 (UBIQUITIN-CONJUGATING ENZYME 26); ubiquitin-protein ligase
Coordinates
chrA06:+:776396..778536
Molecular Weight (calculated)
55686.7 Da
IEP (calculated)
7.111
GRAVY (calculated)
-0.489
Length
497 amino acids
Sequence
(BLAST)
001: MEPDVVEIAP PLFPSGSRTR KPRKAVIPEV IDVEQYEFRN NNNNGVIDVK NKGKAIQDGS FYDHNLFDHV DIDDYSMFQA VLNSQDFPTD AEVFMSTTQP
101: WGFPNSKGSR SSSTEAVWNT SMETPQSWDF FSGLAFPQTS SYSSVSSSTT KVLPQAPDIV MVPAPPPSRS FKLDRSGSSS KTLAAEVVPS AQADFLKSFK
201: RFETVDDFSD HHYASKGKAS KQHSKNWVKK VQADWQILEN DLPETIFVRA CETRMDLLRA VIIGAEGTPY HDGLFFFDIQ FPDSYPSAPP KVHYHSGGLR
301: INPNLYNCGK VCLSLLGTWT GNSREKWLPK ESTMLQLLVS IQALILNQKP YFNEPGYEMT MGTPSGEAHS KVYSENVFIL SLRTMVYSMR NPPKHFEEFV
401: RSHYFVRALD IVKACNAYKD GAPVASIVKG GVQDIEETSE SGSKKFRNDV AAFMKTVVDE LVKLGVKELE EKPKPLPENN ANAESIKGNR KRSRSVR
Best Arabidopsis Sequence Match ( AT1G53025.1 )
(BLAST)
001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR
Arabidopsis Description
Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.