Factsheet for HORVU3Hr1G031890.10

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G109730.1	Barley	cytosol	36.68	90.68
TraesCS3A01G157200.1	Wheat	mitochondrion, nucleus, plastid	83.92	89.3
HORVU1Hr1G090980.2	Barley	cytosol	44.72	89.0
TraesCS3B01G183600.1	Wheat	mitochondrion, nucleus	83.42	88.06
TraesCS3D01G164800.2	Wheat	mitochondrion, nucleus, plastid	82.91	87.3
HORVU2Hr1G062530.3	Barley	cytosol	27.14	83.08
HORVU5Hr1G000190.3	Barley	cytosol	26.63	81.54
HORVU3Hr1G031950.4	Barley	mitochondrion	68.09	73.84
Zm00001d051483_P001	Maize	mitochondrion, nucleus, peroxisome	34.42	67.82
Zm00001d015028_P001	Maize	cytosol, mitochondrion, nucleus	33.92	66.83
KXG31477	Sorghum	mitochondrion, plastid	61.31	66.3
Zm00001d039280_P005	Maize	mitochondrion, nucleus, plastid	59.05	63.0
Zm00001d047959_P001	Maize	cytosol	33.92	60.54
Zm00001d049101_P001	Maize	cytosol	23.37	59.62
Os01t0233900-01	Rice	mitochondrion	64.32	55.05
CDY30673	Canola	nucleus	24.62	54.14
Bra036393.1-P	Field mustard	cytosol, extracellular	11.31	52.94
CDY51802	Canola	cytosol	24.12	46.83
AT1G53023.1	Thale cress	cytosol	34.92	43.99
KRH26136	Soybean	cytosol	33.17	43.42
Bra041020.1-P	Field mustard	plastid	33.67	40.73
CDY25883	Canola	cytosol	28.89	40.64
Bra038095.1-P	Field mustard	cytosol, nucleus, peroxisome	33.17	40.62
CDY25884	Canola	plastid	32.66	39.27
KRH26135	Soybean	cytosol	37.19	38.05
GSMUA_Achr10P...	Banana	nucleus	41.71	34.87
HORVU1Hr1G029800.11	Barley	plastid	41.46	34.59
HORVU3Hr1G031730.4	Barley	nucleus, plastid	41.71	34.58
PGSC0003DMT400047166	Potato	nucleus	39.45	33.98
KRH58633	Soybean	cytosol, nucleus	37.94	33.71
Solyc07g053960.2.1	Tomato	nucleus	39.2	33.69
CDY55875	Canola	nucleus	35.68	33.26
CDX71178	Canola	cytosol	34.92	32.25
Bra030965.1-P	Field mustard	nucleus	37.94	32.13
KRH42541	Soybean	nucleus	38.19	32.07
CDY02528	Canola	cytosol	38.19	31.67
Bra040814.1-P	Field mustard	cytosol	36.93	31.61
CDY25886	Canola	cytosol	36.93	31.61
CDY47562	Canola	cytosol	38.19	31.54
HORVU1Hr1G085630.1	Barley	cytosol, nucleus	45.73	31.43
VIT_12s0028g03630.t01	Wine grape	nucleus	39.45	30.72
CDY24125	Canola	cytosol	37.44	30.66
HORVU3Hr1G062370.3	Barley	golgi	44.97	30.39
Bra019007.1-P	Field mustard	cytosol	37.19	29.78
CDX82439	Canola	cytosol	33.92	29.41
CDX75824	Canola	cytosol	34.17	29.12
CDY26018	Canola	cytosol	36.93	28.94
CDX98552	Canola	cytosol	37.94	27.76
CDX97660	Canola	cytosol	38.44	27.72
Bra027252.1-P	Field mustard	cytosol	38.19	27.64
Bra001591.1-P	Field mustard	nucleus	36.93	27.27
AT1G53025.2	Thale cress	nucleus	36.93	26.39
Bra021105.1-P	Field mustard	nucleus	37.44	24.96
CDY20117	Canola	nucleus	37.44	24.92
AT3G15355.1	Thale cress	nucleus	36.68	23.97
CDY21838	Canola	cytosol	36.93	22.65
Solyc10g007000.2.1	Tomato	cytosol	37.69	22.49
KRH27240	Soybean	cytosol	39.45	22.3
KRH22096	Soybean	cytosol	40.2	22.13
VIT_19s0014g02760.t01	Wine grape	nucleus	40.45	21.47
PGSC0003DMT400064440	Potato	nucleus	37.44	20.47
PGSC0003DMT400039746	Potato	nucleus	36.43	20.0
Solyc12g013820.1.1	Tomato	nucleus	36.43	19.54
HORVU1Hr1G085570.2	Barley	cytosol	39.45	18.54
KRH55293	Soybean	cytosol, peroxisome, plastid	38.44	17.61
HORVU3Hr1G004520.2	Barley	nucleus	37.44	13.52

Protein Annotations

EnsemblPlants:HORVU3Hr1G031890.10	EnsemblPlantsGene:HORVU3Hr1G031890	Gene3D:3.10.110.10	InterPro:IPR000608	InterPro:IPR016135	InterPro:UBQ-conjugat_E2
InterPro:UBQ-conjugating_enzyme/RWD	PANTHER:PTHR44273	PANTHER:PTHR44273:SF1	PFAM:PF00179	PFscan:PS50127	SEG:seg
SMART:SM00212	SUPFAM:SSF54495	UniParc:UPI000B47306F	UniProt:A0A287KND3	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr3H:+:160752380..160757213

Molecular Weight (calculated)

44178.9 Da

IEP (calculated)

6.739

GRAVY (calculated)

-0.444

Length

398 amino acids

Sequence
(BLAST)

001: VGSKSNGVSC FSGDFSLGWI GLEDGSQEAA STLWSWQEKE EEFQQERQVH RPSLARCASA APHPTANVLA SNILLDPCSS GAGNVLSLQK HEPECSSNIS
101: STIKAVDGSE DEDHKLFNQF DVVQDYSDHH YAKASPGKTS KDWTKTIQNE WKLLQRDLPG SIYVRVYEDR IDLLRAAIVG PSGTPYHDGL FFFDVRFPPE
201: YPRCPPKVYY HSGGLRLNPN LYESGKVCLS LLNTWWGSGC EKWSKSNSTM LQVLISIQGL VLNDKPYFNE PGYKNTVNTP LGEKHSMAYN QTAFVLSCKT
301: MLYSLRKPPK HFETLVVHHF HERERTILDA CSAYASGIVV GSSVRDGAKY ACDKCFAGFK KSLDAHTELL AKELVKNRAQ ALELKGDTPA ADEIASTS

Best Arabidopsis Sequence Match ( AT1G53025.1 )
(BLAST)

001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSR

Arabidopsis Description

Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.