Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30673 | Canola | nucleus | 36.3 | 85.64 |
| CDY25886 | Canola | cytosol | 92.04 | 84.52 |
| CDY51802 | Canola | cytosol | 39.81 | 82.93 |
| CDY25883 | Canola | cytosol | 53.63 | 80.92 |
| CDY25884 | Canola | plastid | 59.95 | 77.34 |
| CDX71178 | Canola | cytosol | 69.09 | 68.45 |
| CDY26018 | Canola | cytosol | 78.92 | 66.34 |
| CDY24125 | Canola | cytosol | 74.94 | 65.84 |
| CDY47562 | Canola | cytosol | 72.37 | 64.11 |
| CDY02528 | Canola | cytosol | 71.9 | 63.96 |
| AT1G53023.1 | Thale cress | cytosol | 46.37 | 62.66 |
| HORVU3Hr1G109730.1 | Barley | cytosol | 21.78 | 57.76 |
| AT1G53025.2 | Thale cress | nucleus | 72.13 | 55.3 |
| HORVU1Hr1G090980.2 | Barley | cytosol | 25.53 | 54.5 |
| GSMUA_Achr7P25120_001 | Banana | cytosol | 33.02 | 47.16 |
| KRH26136 | Soybean | cytosol | 33.02 | 46.38 |
| Zm00001d009007_P001 | Maize | cytosol | 24.82 | 43.27 |
| CDX82439 | Canola | cytosol | 45.9 | 42.7 |
| CDX75824 | Canola | cytosol | 46.14 | 42.18 |
| HORVU2Hr1G062530.3 | Barley | cytosol | 12.65 | 41.54 |
| HORVU5Hr1G000190.3 | Barley | cytosol | 12.41 | 40.77 |
| KRH26135 | Soybean | cytosol | 36.07 | 39.59 |
| CDX98552 | Canola | cytosol | 50.12 | 39.34 |
| CDX97660 | Canola | cytosol | 50.35 | 38.95 |
| TraesCS5D01G272300.1 | Wheat | cytosol, nucleus, plastid | 31.15 | 38.89 |
| Os01t0677500-00 | Rice | cytosol | 31.38 | 38.84 |
| Zm00001d051483_P001 | Maize | mitochondrion, nucleus, peroxisome | 18.27 | 38.61 |
| Zm00001d015028_P001 | Maize | cytosol, mitochondrion, nucleus | 18.03 | 38.12 |
| TraesCS3A01G157200.1 | Wheat | mitochondrion, nucleus, plastid | 33.02 | 37.7 |
| TraesCS3B01G183600.1 | Wheat | mitochondrion, nucleus | 33.26 | 37.67 |
| TraesCS3D01G164800.2 | Wheat | mitochondrion, nucleus, plastid | 33.02 | 37.3 |
| CDY20117 | Canola | nucleus | 51.76 | 36.96 |
| KXG31477 | Sorghum | mitochondrion, plastid | 31.85 | 36.96 |
| Os09t0294300-01 | Rice | nucleus | 37.0 | 36.49 |
| TraesCS3A01G157300.2 | Wheat | nucleus | 31.15 | 36.24 |
| HORVU3Hr1G031950.4 | Barley | mitochondrion | 31.15 | 36.24 |
| TraesCS3B01G183800.2 | Wheat | nucleus | 31.15 | 36.14 |
| TraesCS3D01G164900.3 | Wheat | nucleus | 30.91 | 35.87 |
| HORVU3Hr1G031890.10 | Barley | cytosol, nucleus | 33.26 | 35.68 |
| Zm00001d039280_P005 | Maize | mitochondrion, nucleus, plastid | 30.68 | 35.12 |
| Zm00001d009513_P003 | Maize | cytosol | 32.32 | 34.76 |
| CDY21838 | Canola | cytosol | 52.46 | 34.51 |
| Zm00001d047959_P001 | Maize | cytosol | 17.56 | 33.63 |
| GSMUA_Achr6P22670_001 | Banana | cytosol | 36.07 | 33.62 |
| TraesCS3D01G164200.1 | Wheat | nucleus, plastid | 34.89 | 33.04 |
| TraesCS3A01G156300.1 | Wheat | nucleus, plastid | 34.89 | 32.82 |
| Os05t0557600-01 | Rice | cytosol | 38.88 | 32.61 |
| TraesCS3B01G183000.1 | Wheat | nucleus, plastid | 34.43 | 32.52 |
| Zm00001d039285_P001 | Maize | cytosol, plastid | 33.72 | 32.0 |
| EES19929 | Sorghum | nucleus | 37.7 | 31.76 |
| KXG31481 | Sorghum | nucleus | 33.96 | 31.59 |
| Zm00001d049101_P001 | Maize | cytosol | 11.48 | 31.41 |
| Os01t0232500-01 | Rice | nucleus | 35.36 | 31.13 |
| GSMUA_Achr9P00210_001 | Banana | plastid | 39.11 | 31.1 |
| GSMUA_Achr10P... | Banana | nucleus | 34.43 | 30.88 |
| Os01t0233900-01 | Rice | mitochondrion | 33.26 | 30.54 |
| EES17914 | Sorghum | plastid | 32.79 | 30.43 |
| Os05t0232500-01 | Rice | nucleus, plastid | 33.26 | 30.41 |
| TraesCS5D01G272400.1 | Wheat | nucleus | 32.08 | 30.24 |
| HORVU3Hr1G031730.4 | Barley | nucleus, plastid | 33.96 | 30.21 |
| TraesCS5B01G264000.1 | Wheat | nucleus | 31.85 | 30.02 |
| TraesCS3D01G269000.1 | Wheat | nucleus | 37.24 | 30.0 |
| CDX72600 | Canola | cytosol | 8.43 | 30.0 |
| TraesCS3B01G303300.1 | Wheat | nucleus | 37.24 | 30.0 |
| TraesCS3A01G269200.1 | Wheat | nucleus | 37.24 | 30.0 |
| KXG33109 | Sorghum | nucleus | 37.0 | 29.59 |
| TraesCS1B01G415500.2 | Wheat | nucleus | 38.64 | 29.41 |
| TraesCS1D01G396000.2 | Wheat | cytosol, mitochondrion, nucleus | 38.41 | 29.34 |
| TraesCS1A01G388000.1 | Wheat | cytosol, mitochondrion, nucleus | 38.17 | 29.06 |
| HORVU1Hr1G029800.11 | Barley | plastid | 32.32 | 28.93 |
| TraesCS1A01G129500.2 | Wheat | nucleus | 33.26 | 28.8 |
| HORVU1Hr1G085630.1 | Barley | cytosol, nucleus | 38.64 | 28.5 |
| Solyc10g007000.2.1 | Tomato | cytosol | 43.33 | 27.74 |
| TraesCS1B01G146400.2 | Wheat | plastid | 33.02 | 27.17 |
| HORVU3Hr1G062370.3 | Barley | golgi | 37.47 | 27.16 |
| TraesCS1D01G125200.2 | Wheat | plastid | 33.02 | 27.06 |
| KRH27240 | Soybean | cytosol | 44.26 | 26.85 |
| KRH22096 | Soybean | cytosol | 44.03 | 26.0 |
| VIT_19s0014g02760.t01 | Wine grape | nucleus | 45.43 | 25.87 |
| PGSC0003DMT400064440 | Potato | nucleus | 44.03 | 25.82 |
| PGSC0003DMT400039746 | Potato | nucleus | 39.81 | 23.45 |
| Solyc12g013820.1.1 | Tomato | nucleus | 40.52 | 23.32 |
| Os01t0229900-01 | Rice | mitochondrion | 14.05 | 22.06 |
| KRH55293 | Soybean | cytosol, peroxisome, plastid | 41.92 | 20.6 |
| CDY42703 | Canola | cytosol, mitochondrion, nucleus | 30.68 | 19.49 |
| CDY53783 | Canola | nucleus | 34.43 | 17.36 |
| CDY37693 | Canola | nucleus | 34.19 | 16.88 |
| CDX89761 | Canola | nucleus | 33.72 | 13.75 |
| CDY02226 | Canola | endoplasmic reticulum, extracellular | 29.27 | 10.31 |
| Os03t0679300-01 | Rice | mitochondrion | 3.04 | 7.83 |
Protein Annotations
| EnsemblPlants:CDY55875 | EnsemblPlantsGene:GSBRNA2T00017470001 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44273 | PANTHER:PTHR44273:SF5 | PFAM:PF00179 | PFscan:PS50127 | ProteinID:CDY55875 |
| ProteinID:CDY55875.1 | SEG:seg | SMART:SM00212 | SUPFAM:SSF54495 | UniParc:UPI0004EEB07C | UniProt:A0A078IZD0 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC06g41780DBnaC06g41780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IZD0]
Coordinates
chrLK033435:-:8350..10187
Molecular Weight (calculated)
47999.5 Da
IEP (calculated)
9.422
GRAVY (calculated)
-0.606
Length
427 amino acids
Sequence
(BLAST)
(BLAST)
001: MERDVVEIAP PLFPSGSRTR KPRKAGIPEV IDVEHYEFRN GGLVSNNNNA NLVDKKNKGK SIQDGSFYDH LADEEVVMST THPWGFPSSS SKRSRRSSSR
101: PFNRDASASS SRPRAAVEVV VSSAQANFLR DFKRFDTVDN FSQHHYASQG NASKQHSRTW VKKVQADWKI LENDLPEAIS VRACESRMDL MRAVIVGAEG
201: TPYHDGVFFF DIHFPDTYPS VPPMVHYHSG GLRINPNLYN CGKVCLSLLG TWNGNAREQW LPQESTMLQL LVSIQALILN QKPYFNEPAY GRTKGTPSGE
301: AHSKFYSENV YVLSLRTMVY SMRKPPKHFE EFVRSHYFER AHDIVKASNA YIDGAPVGSI VKGGVQDIEE SSESGSMKFR TEVATFMKTV VEELVKLGVK
401: ELDDKLKPPP NAESSNKSNC KRSRSSR
101: PFNRDASASS SRPRAAVEVV VSSAQANFLR DFKRFDTVDN FSQHHYASQG NASKQHSRTW VKKVQADWKI LENDLPEAIS VRACESRMDL MRAVIVGAEG
201: TPYHDGVFFF DIHFPDTYPS VPPMVHYHSG GLRINPNLYN CGKVCLSLLG TWNGNAREQW LPQESTMLQL LVSIQALILN QKPYFNEPAY GRTKGTPSGE
301: AHSKFYSENV YVLSLRTMVY SMRKPPKHFE EFVRSHYFER AHDIVKASNA YIDGAPVGSI VKGGVQDIEE SSESGSMKFR TEVATFMKTV VEELVKLGVK
401: ELDDKLKPPP NAESSNKSNC KRSRSSR
001: MVEIKDSSNV RKLKEEFLRD FKRFDTVEDF SDHHYAAEGS PAKLSLWHLK FKGRPKNWVK DIQKEWKILD KNLPETIFVR ACESRIDLLR AVIIGAEGTP
101: YHDGLFFFDI QFPDTYPSVP PKVHYHSGGL RINPNLYKCG KVCLSLISTW TGKKREKWLP KESTMLQLLV SIQALILNEK PYYNEPGYEK SMGTPLGESY
201: SKDYSENVFV FSLKTMHFEE FVRSHFFVRS HDIVKACNAY KDGAPVGSID KGGVKKQTRQ RGSLKFRINV TSFMKTVVDE FVNLGAIREA NHRGEPNPTL
301: FSCFFFCYLE LIICSV
101: YHDGLFFFDI QFPDTYPSVP PKVHYHSGGL RINPNLYKCG KVCLSLISTW TGKKREKWLP KESTMLQLLV SIQALILNEK PYYNEPGYEK SMGTPLGESY
201: SKDYSENVFV FSLKTMHFEE FVRSHFFVRS HDIVKACNAY KDGAPVGSID KGGVKKQTRQ RGSLKFRINV TSFMKTVVDE FVNLGAIREA NHRGEPNPTL
301: FSCFFFCYLE LIICSV
Arabidopsis Description
UBC39Putative ubiquitin-conjugating enzyme E2 39 [Source:UniProtKB/Swiss-Prot;Acc:F4HPP7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.