Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY02528 | Canola | cytosol | 97.72 | 98.12 |
| Bra030965.1-P | Field mustard | nucleus | 95.02 | 97.45 |
| CDY30673 | Canola | nucleus | 30.29 | 80.66 |
| CDY51802 | Canola | cytosol | 32.78 | 77.07 |
| CDY25883 | Canola | cytosol | 44.19 | 75.27 |
| CDY55875 | Canola | nucleus | 64.11 | 72.37 |
| CDY25884 | Canola | plastid | 49.59 | 72.21 |
| CDX71178 | Canola | cytosol | 64.32 | 71.93 |
| CDY26018 | Canola | cytosol | 74.9 | 71.06 |
| CDY24125 | Canola | cytosol | 69.5 | 68.93 |
| AT1G53023.1 | Thale cress | cytosol | 44.61 | 68.04 |
| CDY25886 | Canola | cytosol | 65.15 | 67.53 |
| AT1G53025.2 | Thale cress | nucleus | 72.82 | 63.02 |
| HORVU3Hr1G109730.1 | Barley | cytosol | 19.71 | 59.01 |
| HORVU1Hr1G090980.2 | Barley | cytosol | 22.82 | 55.0 |
| GSMUA_Achr7P25120_001 | Banana | cytosol | 30.08 | 48.49 |
| KRH26136 | Soybean | cytosol | 30.08 | 47.7 |
| Zm00001d009007_P001 | Maize | cytosol | 22.82 | 44.9 |
| CDX82439 | Canola | cytosol | 42.53 | 44.66 |
| CDX75824 | Canola | cytosol | 42.53 | 43.9 |
| Os01t0677500-00 | Rice | cytosol | 30.91 | 43.19 |
| Zm00001d051483_P001 | Maize | mitochondrion, nucleus, peroxisome | 17.84 | 42.57 |
| TraesCS5D01G272300.1 | Wheat | cytosol, nucleus, plastid | 30.08 | 42.4 |
| HORVU2Hr1G062530.3 | Barley | cytosol | 11.41 | 42.31 |
| Zm00001d015028_P001 | Maize | cytosol, mitochondrion, nucleus | 17.63 | 42.08 |
| HORVU5Hr1G000190.3 | Barley | cytosol | 11.2 | 41.54 |
| CDX98552 | Canola | cytosol | 46.47 | 41.18 |
| KRH26135 | Soybean | cytosol | 33.2 | 41.13 |
| KXG31477 | Sorghum | mitochondrion, plastid | 30.91 | 40.49 |
| CDX97660 | Canola | cytosol | 46.06 | 40.22 |
| TraesCS3D01G164800.2 | Wheat | mitochondrion, nucleus, plastid | 31.54 | 40.21 |
| TraesCS3A01G157200.1 | Wheat | mitochondrion, nucleus, plastid | 31.12 | 40.11 |
| TraesCS3B01G183600.1 | Wheat | mitochondrion, nucleus | 31.33 | 40.05 |
| Zm00001d039280_P005 | Maize | mitochondrion, nucleus, plastid | 30.08 | 38.87 |
| TraesCS3A01G157300.2 | Wheat | nucleus | 29.25 | 38.42 |
| TraesCS3B01G183800.2 | Wheat | nucleus | 29.25 | 38.32 |
| CDY20117 | Canola | nucleus | 47.51 | 38.29 |
| HORVU3Hr1G031890.10 | Barley | cytosol, nucleus | 31.54 | 38.19 |
| HORVU3Hr1G031950.4 | Barley | mitochondrion | 29.05 | 38.15 |
| Os09t0294300-01 | Rice | nucleus | 34.23 | 38.11 |
| TraesCS3D01G164900.3 | Wheat | nucleus | 28.84 | 37.77 |
| Zm00001d047959_P001 | Maize | cytosol | 17.22 | 37.22 |
| GSMUA_Achr6P22670_001 | Banana | cytosol | 34.65 | 36.46 |
| Zm00001d009513_P003 | Maize | cytosol | 29.67 | 36.02 |
| CDY21838 | Canola | cytosol | 47.72 | 35.44 |
| Os05t0557600-01 | Rice | cytosol | 36.93 | 34.97 |
| TraesCS3D01G164200.1 | Wheat | nucleus, plastid | 32.37 | 34.59 |
| EES19929 | Sorghum | nucleus | 36.1 | 34.32 |
| TraesCS3B01G183000.1 | Wheat | nucleus, plastid | 32.16 | 34.29 |
| Zm00001d039285_P001 | Maize | cytosol, plastid | 31.95 | 34.22 |
| TraesCS3A01G156300.1 | Wheat | nucleus, plastid | 32.16 | 34.14 |
| Zm00001d049101_P001 | Maize | cytosol | 11.0 | 33.97 |
| TraesCS5D01G272400.1 | Wheat | nucleus | 31.74 | 33.77 |
| EES17914 | Sorghum | plastid | 32.16 | 33.7 |
| Os05t0232500-01 | Rice | nucleus, plastid | 32.37 | 33.4 |
| GSMUA_Achr10P... | Banana | nucleus | 32.99 | 33.4 |
| TraesCS5B01G264000.1 | Wheat | nucleus | 31.33 | 33.33 |
| GSMUA_Achr9P00210_001 | Banana | plastid | 36.93 | 33.15 |
| HORVU1Hr1G029800.11 | Barley | plastid | 32.57 | 32.91 |
| KXG31481 | Sorghum | nucleus | 31.33 | 32.9 |
| TraesCS3D01G269000.1 | Wheat | nucleus | 36.1 | 32.83 |
| TraesCS3A01G269200.1 | Wheat | nucleus | 36.1 | 32.83 |
| TraesCS1A01G129500.2 | Wheat | nucleus | 33.4 | 32.66 |
| TraesCS3B01G303300.1 | Wheat | nucleus | 35.89 | 32.64 |
| Os01t0232500-01 | Rice | nucleus | 32.57 | 32.37 |
| Os01t0233900-01 | Rice | mitochondrion | 31.12 | 32.26 |
| HORVU3Hr1G031730.4 | Barley | nucleus, plastid | 31.95 | 32.08 |
| KXG33109 | Sorghum | nucleus | 35.48 | 32.02 |
| TraesCS1B01G415500.2 | Wheat | nucleus | 37.14 | 31.91 |
| TraesCS1D01G396000.2 | Wheat | cytosol, mitochondrion, nucleus | 36.72 | 31.66 |
| TraesCS1A01G388000.1 | Wheat | cytosol, mitochondrion, nucleus | 36.51 | 31.37 |
| KRH27240 | Soybean | cytosol | 45.44 | 31.11 |
| TraesCS1D01G125200.2 | Wheat | plastid | 33.4 | 30.9 |
| TraesCS1B01G146400.2 | Wheat | plastid | 33.2 | 30.83 |
| HORVU1Hr1G085630.1 | Barley | cytosol, nucleus | 36.93 | 30.74 |
| Solyc10g007000.2.1 | Tomato | cytosol | 41.91 | 30.28 |
| HORVU3Hr1G062370.3 | Barley | golgi | 36.51 | 29.88 |
| KRH22096 | Soybean | cytosol | 44.61 | 29.74 |
| VIT_19s0014g02760.t01 | Wine grape | nucleus | 45.85 | 29.47 |
| CDX72600 | Canola | cytosol | 7.26 | 29.17 |
| PGSC0003DMT400064440 | Potato | nucleus | 42.95 | 28.43 |
| PGSC0003DMT400039746 | Potato | nucleus | 38.59 | 25.66 |
| Solyc12g013820.1.1 | Tomato | nucleus | 38.59 | 25.07 |
| Os01t0229900-01 | Rice | mitochondrion | 13.07 | 23.16 |
| KRH55293 | Soybean | cytosol, peroxisome, plastid | 40.66 | 22.55 |
| CDY42703 | Canola | cytosol, mitochondrion, nucleus | 29.05 | 20.83 |
| CDY53783 | Canola | nucleus | 31.74 | 18.06 |
| CDY37693 | Canola | nucleus | 31.54 | 17.57 |
| CDX89761 | Canola | nucleus | 31.74 | 14.61 |
| CDY02226 | Canola | endoplasmic reticulum, extracellular | 27.39 | 10.89 |
| Os03t0679300-01 | Rice | mitochondrion | 3.32 | 9.64 |
Protein Annotations
| EnsemblPlants:CDY47562 | EnsemblPlantsGene:GSBRNA2T00087649001 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44273 | PANTHER:PTHR44273:SF5 | PFAM:PF00179 | PFscan:PS50127 | ProteinID:CDY47562 |
| ProteinID:CDY47562.1 | SEG:seg | SMART:SM00212 | SUPFAM:SSF54495 | UniParc:UPI0004EBA5BD | UniProt:A0A078IBR9 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC03g69050DBnaC03g69050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IBR9]
Coordinates
chrLK032722:+:22875..25905
Molecular Weight (calculated)
53364.2 Da
IEP (calculated)
8.700
GRAVY (calculated)
-0.423
Length
482 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPDVMEIDP PPLASASRTR KPRKVNLEVI DVEQYHVDKM NKGKAIQDGH NPFSHVANGV MPIDVDSYTV VLNDIPTGVK VVMSTTQPCE FQNYSSKGTS
101: KSSRNSSNSF LATPSSVPQS LDFASLSASF AQNNQTVSSS AVQPVDSDAS ASSSSAEAVN SSQANFLKDF KRFDTVEDFS DHHYLSKGKA SKQHSKTWLK
201: KVQADWKILE NDLPETIFVR ACESRMDLLR AVIIGAEGTP YHDGLFFFDI QFPDSYPSVP PKVHYHSGGL RINPNLYNCG KVCLSLLGTW TGNKREKWLP
301: QESTMLQLLV SIQALILNQK PYFNEPGYEP TKGTVSGEAH SKVYSENVFI LSLKTMVYSM RKPPKHFEEF VHSHYFVRAL DIVKACNAYK DGAPVGSILK
401: GGVQGIEETS QSGSKKFRTD VAAFMKTVVG EFVKLGIKEL EEKPKPPPVV NANTESNTAN RKRSRSSSIK EFLANIGRCV FQ
101: KSSRNSSNSF LATPSSVPQS LDFASLSASF AQNNQTVSSS AVQPVDSDAS ASSSSAEAVN SSQANFLKDF KRFDTVEDFS DHHYLSKGKA SKQHSKTWLK
201: KVQADWKILE NDLPETIFVR ACESRMDLLR AVIIGAEGTP YHDGLFFFDI QFPDSYPSVP PKVHYHSGGL RINPNLYNCG KVCLSLLGTW TGNKREKWLP
301: QESTMLQLLV SIQALILNQK PYFNEPGYEP TKGTVSGEAH SKVYSENVFI LSLKTMVYSM RKPPKHFEEF VHSHYFVRAL DIVKACNAYK DGAPVGSILK
401: GGVQGIEETS QSGSKKFRTD VAAFMKTVVG EFVKLGIKEL EEKPKPPPVV NANTESNTAN RKRSRSSSIK EFLANIGRCV FQ
001: MEPDVVEIPP PPLIASGSRT RKPRKAVPEV IDVESYEFRN VGVVKDNNVV DKKNKGKAIQ VDSFSFNNVQ SHHHGSSLLN LETFQDYYGH KNIPFSEFAN
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSSIKEFLAN IGRCVFQ
101: QPIDVDDYSM YQDVLDPKDV PAGAEVTVPW GLNSSSKGTA KSSISIMRSQ SMKGYGTVSL ATTNVPQLWD YTLPQQNQAI YSSVSFSAVQ PQTPDVVMVT
201: NPTPNPFSYD ASASSSHPIA AEPISSVQDS SNARKLKEEF LRDFKRFDTV EDFSDHHYAS KGKSSKQHSK NWVKKVQADW KILENDLPEA ISVRACESRM
301: DLLRAVIIGA EGTPYHDGLF FFDIQFPDTY PSVPPNVHYH SGGLRINPNL YNCGKVCLSL LGTWAGSARE KWLPNESTML QLLVSIQALI LNEKPYFNEP
401: GYVQSAGTAS GESKSKVYSE NVFLLSLKTM VYSIRRPPQH FEEYVQNHYF VRSHDIVKAC NAYKAGAPLG SMVKGGVQDL EEARQSGSKK FKTDVASFMQ
501: TVVDEFVKLG VKELAEKPEP PMSNANTENQ SKKKTRKRSR SSSIKEFLAN IGRCVFQ
Arabidopsis Description
Ubiquitin-conjugating enzyme family protein [Source:TAIR;Acc:AT1G53025]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.