Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001591.1-P | Field mustard | nucleus | 94.77 | 80.7 |
| CDX75824 | Canola | cytosol | 81.26 | 79.87 |
| CDY30673 | Canola | nucleus | 26.8 | 67.96 |
| CDY51802 | Canola | cytosol | 28.1 | 62.93 |
| CDY20117 | Canola | nucleus | 78.21 | 60.03 |
| HORVU3Hr1G109730.1 | Barley | cytosol | 20.91 | 59.63 |
| CDX98552 | Canola | cytosol | 70.37 | 59.38 |
| CDX97660 | Canola | cytosol | 70.37 | 58.51 |
| CDY21838 | Canola | cytosol | 77.78 | 55.01 |
| CDY25883 | Canola | cytosol | 32.9 | 53.36 |
| AT3G15355.1 | Thale cress | nucleus | 67.76 | 51.07 |
| HORVU1Hr1G090980.2 | Barley | cytosol | 21.79 | 50.0 |
| CDY25884 | Canola | plastid | 35.95 | 49.85 |
| GSMUA_Achr7P25120_001 | Banana | cytosol | 31.37 | 48.16 |
| CDX71178 | Canola | cytosol | 43.57 | 46.4 |
| CDY55875 | Canola | nucleus | 42.7 | 45.9 |
| KRH26136 | Soybean | cytosol | 30.07 | 45.39 |
| Zm00001d009007_P001 | Maize | cytosol | 23.75 | 44.49 |
| CDY26018 | Canola | cytosol | 49.02 | 44.29 |
| CDY24125 | Canola | cytosol | 45.75 | 43.21 |
| Os01t0677500-00 | Rice | cytosol | 32.03 | 42.61 |
| CDY25886 | Canola | cytosol | 43.14 | 42.58 |
| CDY47562 | Canola | cytosol | 44.66 | 42.53 |
| CDY02528 | Canola | cytosol | 44.44 | 42.5 |
| TraesCS5D01G272300.1 | Wheat | cytosol, nucleus, plastid | 30.28 | 40.64 |
| Zm00001d015028_P001 | Maize | cytosol, mitochondrion, nucleus | 17.86 | 40.59 |
| Zm00001d051483_P001 | Maize | mitochondrion, nucleus, peroxisome | 17.86 | 40.59 |
| KRH26135 | Soybean | cytosol | 33.55 | 39.59 |
| HORVU2Hr1G062530.3 | Barley | cytosol | 10.68 | 37.69 |
| Zm00001d009513_P003 | Maize | cytosol | 32.46 | 37.53 |
| KXG31477 | Sorghum | mitochondrion, plastid | 30.07 | 37.5 |
| HORVU5Hr1G000190.3 | Barley | cytosol | 10.46 | 36.92 |
| TraesCS3B01G183600.1 | Wheat | mitochondrion, nucleus | 30.07 | 36.6 |
| TraesCS3D01G164800.2 | Wheat | mitochondrion, nucleus, plastid | 30.07 | 36.51 |
| TraesCS3A01G157200.1 | Wheat | mitochondrion, nucleus, plastid | 29.63 | 36.36 |
| Zm00001d039280_P005 | Maize | mitochondrion, nucleus, plastid | 29.41 | 36.19 |
| Zm00001d047959_P001 | Maize | cytosol | 17.43 | 35.87 |
| GSMUA_Achr6P22670_001 | Banana | cytosol | 35.51 | 35.59 |
| HORVU3Hr1G031950.4 | Barley | mitochondrion | 28.1 | 35.15 |
| TraesCS3A01G157300.2 | Wheat | nucleus | 28.1 | 35.15 |
| Os09t0294300-01 | Rice | nucleus | 33.12 | 35.1 |
| TraesCS3B01G183800.2 | Wheat | nucleus | 27.89 | 34.78 |
| TraesCS3D01G164900.3 | Wheat | nucleus | 27.89 | 34.78 |
| TraesCS3B01G183000.1 | Wheat | nucleus, plastid | 34.2 | 34.73 |
| TraesCS3D01G164200.1 | Wheat | nucleus, plastid | 33.99 | 34.59 |
| TraesCS3A01G156300.1 | Wheat | nucleus, plastid | 33.99 | 34.36 |
| Zm00001d039285_P001 | Maize | cytosol, plastid | 33.55 | 34.22 |
| HORVU3Hr1G031890.10 | Barley | cytosol, nucleus | 29.41 | 33.92 |
| EES17914 | Sorghum | plastid | 33.77 | 33.7 |
| TraesCS5D01G272400.1 | Wheat | nucleus | 33.12 | 33.55 |
| Os05t0232500-01 | Rice | nucleus, plastid | 33.77 | 33.19 |
| KXG31481 | Sorghum | nucleus | 33.12 | 33.12 |
| TraesCS5B01G264000.1 | Wheat | nucleus | 32.68 | 33.11 |
| Os05t0557600-01 | Rice | cytosol | 36.6 | 33.01 |
| Zm00001d049101_P001 | Maize | cytosol | 11.11 | 32.69 |
| Os01t0232500-01 | Rice | nucleus | 34.42 | 32.58 |
| CDX72600 | Canola | cytosol | 8.5 | 32.5 |
| GSMUA_Achr10P... | Banana | nucleus | 33.55 | 32.35 |
| GSMUA_Achr9P00210_001 | Banana | plastid | 37.69 | 32.22 |
| HORVU1Hr1G029800.11 | Barley | plastid | 33.12 | 31.87 |
| HORVU3Hr1G031730.4 | Barley | nucleus, plastid | 33.12 | 31.67 |
| TraesCS1A01G129500.2 | Wheat | nucleus | 33.99 | 31.64 |
| EES19929 | Sorghum | nucleus | 34.2 | 30.97 |
| TraesCS3D01G269000.1 | Wheat | nucleus | 35.73 | 30.94 |
| TraesCS3B01G303300.1 | Wheat | nucleus | 35.73 | 30.94 |
| TraesCS3A01G269200.1 | Wheat | nucleus | 35.73 | 30.94 |
| KXG33109 | Sorghum | nucleus | 35.73 | 30.71 |
| Os01t0233900-01 | Rice | mitochondrion | 30.28 | 29.89 |
| TraesCS1B01G146400.2 | Wheat | plastid | 33.77 | 29.87 |
| TraesCS1D01G125200.2 | Wheat | plastid | 33.77 | 29.75 |
| TraesCS1B01G415500.2 | Wheat | nucleus | 35.73 | 29.23 |
| TraesCS1D01G396000.2 | Wheat | cytosol, mitochondrion, nucleus | 35.51 | 29.16 |
| TraesCS1A01G388000.1 | Wheat | cytosol, mitochondrion, nucleus | 35.51 | 29.06 |
| HORVU1Hr1G085630.1 | Barley | cytosol, nucleus | 36.38 | 28.84 |
| KRH27240 | Soybean | cytosol | 43.57 | 28.41 |
| Solyc10g007000.2.1 | Tomato | cytosol | 40.52 | 27.89 |
| VIT_19s0014g02760.t01 | Wine grape | nucleus | 45.32 | 27.73 |
| HORVU3Hr1G062370.3 | Barley | golgi | 35.51 | 27.67 |
| KRH22096 | Soybean | cytosol | 42.7 | 27.11 |
| PGSC0003DMT400064440 | Potato | nucleus | 42.05 | 26.51 |
| PGSC0003DMT400039746 | Potato | nucleus | 40.3 | 25.52 |
| Os01t0229900-01 | Rice | mitochondrion | 15.03 | 25.37 |
| Solyc12g013820.1.1 | Tomato | nucleus | 40.96 | 25.34 |
| CDY42703 | Canola | cytosol, mitochondrion, nucleus | 29.63 | 20.24 |
| KRH55293 | Soybean | cytosol, peroxisome, plastid | 38.13 | 20.14 |
| CDY53783 | Canola | nucleus | 31.37 | 17.0 |
| CDY37693 | Canola | nucleus | 31.37 | 16.65 |
| CDX89761 | Canola | nucleus | 32.68 | 14.33 |
| CDY02226 | Canola | endoplasmic reticulum, extracellular | 28.1 | 10.64 |
| Os03t0679300-01 | Rice | mitochondrion | 3.7 | 10.24 |
Protein Annotations
| EnsemblPlants:CDX82439 | EnsemblPlantsGene:GSBRNA2T00137575001 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44273 | PANTHER:PTHR44273:SF5 | PFAM:PF00179 | PFscan:PS50127 | ProteinID:CDX82439 |
| ProteinID:CDX82439.1 | SEG:seg | SMART:SM00212 | SUPFAM:SSF54495 | UniParc:UPI0004EE842A | MapMan:35.1 |
Description
BnaA03g33820D
Coordinates
chrLK031828:-:1290361..1292812
Molecular Weight (calculated)
51191.2 Da
IEP (calculated)
5.067
GRAVY (calculated)
-0.565
Length
459 amino acids
Sequence
(BLAST)
(BLAST)
001: MKPEIVYTTL TPNKGTTPGA MQNGGVLDNN NVDNKNKGKA IQLGSLSEDD HQLEYDPGSS PQSDSLLDPD ALIYEDDSDH YGYEMELEEE EEEEADDYVS
101: EYQALFDAKE KELPAATSSS KKPKKLPHNS KGFTPNSAYA LPQIYLDPQA PVPVPAPAVP APASSTVLLP TQNKPKVKRN MDDYLGKFVF FKRFDIVEDL
201: VDHQYASKGT ASKKHSKEWA KRIQEEWRTL ENDLPEMIFV RAYESRMDLL RAVIIGADGT PYHDGLFFFD IFFPDTYPSV PPVVHYHSGG LRINPNLYNS
301: GKVCLSLLGT WSGAASQMWI PTKSTMLQVL VSIQGLILNE KPYFNEPGLA RTAGSPSGER QSKAYSENTF LLSLKTMVYN MRRPPKYFED FSYGHFFSCA
401: HDVLKACDAY RNGAPVASLE FILLGVLGLE PEEEDKPSET KVAESSRSKR PKRGGVSSK
101: EYQALFDAKE KELPAATSSS KKPKKLPHNS KGFTPNSAYA LPQIYLDPQA PVPVPAPAVP APASSTVLLP TQNKPKVKRN MDDYLGKFVF FKRFDIVEDL
201: VDHQYASKGT ASKKHSKEWA KRIQEEWRTL ENDLPEMIFV RAYESRMDLL RAVIIGADGT PYHDGLFFFD IFFPDTYPSV PPVVHYHSGG LRINPNLYNS
301: GKVCLSLLGT WSGAASQMWI PTKSTMLQVL VSIQGLILNE KPYFNEPGLA RTAGSPSGER QSKAYSENTF LLSLKTMVYN MRRPPKYFED FSYGHFFSCA
401: HDVLKACDAY RNGAPVASLE FILLGVLGLE PEEEDKPSET KVAESSRSKR PKRGGVSSK
001: MEPNVVEIAT PPAASCSRIR TPTKAETPEV IDVEEYDLQN GGVPNGNNVD YKNKGKAIDF DSMSYGDYGE EDEYAVGSPG DDYGYPESSP LSNSLLDPES
101: LIYEDDENYS EQYDFEMEAE PDNYSMYQDL FDGKDIPTGV EVSMDWFPNS ADKESASSSK SSHANNGNNS SKKATKASGI HSQFSSDMET PVAQPWNALP
201: HKAEGVIPNS AYALPQNSKA FQPPYAVHYS ALKTAFSNYL QPQTPDTVLG EAPAPAAGSS GLLPPNTPGF KSNAARFKEE PPILPPDDSR VKRNMEDYLG
301: LYLFFKRFDI VEDFSDHHYA SKGTTSKQHS KDWAKRIQDE WRILEKDLPE MIFVRAYESR MDLLRAVIIG AQGTPYHDGL FFFDIFFPDT YPSTPPIVHY
401: HSGGLRINPN LYNCGKVCLS LLGTWSGNQR EKWIPNTSTM LQVLVSIQGL ILNQKPYFNE PGYERSAGSA HGESTSKAYS ENTFILSLKT MVYTMRRPPK
501: YFEDFAYGHF FSCAHDVLKA CNAYRNGATP GYLVKGAPDV EENSAGMSSL KFRTDVATFV ETVLLKEFIL LGVLGLEPEE EEKTPETIIV AESSKCTRSR
601: SKRDRVSSS
101: LIYEDDENYS EQYDFEMEAE PDNYSMYQDL FDGKDIPTGV EVSMDWFPNS ADKESASSSK SSHANNGNNS SKKATKASGI HSQFSSDMET PVAQPWNALP
201: HKAEGVIPNS AYALPQNSKA FQPPYAVHYS ALKTAFSNYL QPQTPDTVLG EAPAPAAGSS GLLPPNTPGF KSNAARFKEE PPILPPDDSR VKRNMEDYLG
301: LYLFFKRFDI VEDFSDHHYA SKGTTSKQHS KDWAKRIQDE WRILEKDLPE MIFVRAYESR MDLLRAVIIG AQGTPYHDGL FFFDIFFPDT YPSTPPIVHY
401: HSGGLRINPN LYNCGKVCLS LLGTWSGNQR EKWIPNTSTM LQVLVSIQGL ILNQKPYFNE PGYERSAGSA HGESTSKAYS ENTFILSLKT MVYTMRRPPK
501: YFEDFAYGHF FSCAHDVLKA CNAYRNGATP GYLVKGAPDV EENSAGMSSL KFRTDVATFV ETVLLKEFIL LGVLGLEPEE EEKTPETIIV AESSKCTRSR
601: SKRDRVSSS
Arabidopsis Description
UBC25Probable ubiquitin-conjugating enzyme E2 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.