Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20117 | Canola | nucleus | 88.29 | 95.82 |
| CDX98552 | Canola | cytosol | 65.33 | 77.94 |
| CDX82439 | Canola | cytosol | 55.01 | 77.78 |
| CDX97660 | Canola | cytosol | 65.18 | 76.63 |
| CDX75824 | Canola | cytosol | 51.62 | 71.73 |
| CDY30673 | Canola | nucleus | 19.26 | 69.06 |
| CDY51802 | Canola | cytosol | 20.8 | 65.85 |
| AT3G15355.1 | Thale cress | nucleus | 58.86 | 62.73 |
| HORVU3Hr1G109730.1 | Barley | cytosol | 14.79 | 59.63 |
| CDY25883 | Canola | cytosol | 25.27 | 57.95 |
| CDY25884 | Canola | plastid | 27.43 | 53.78 |
| HORVU1Hr1G090980.2 | Barley | cytosol | 16.18 | 52.5 |
| CDY55875 | Canola | nucleus | 34.51 | 52.46 |
| CDX71178 | Canola | cytosol | 34.36 | 51.74 |
| CDY26018 | Canola | cytosol | 39.14 | 50.0 |
| GSMUA_Achr7P25120_001 | Banana | cytosol | 22.96 | 49.83 |
| CDY24125 | Canola | cytosol | 37.13 | 49.59 |
| CDY25886 | Canola | cytosol | 34.67 | 48.39 |
| CDY02528 | Canola | cytosol | 35.44 | 47.92 |
| CDY47562 | Canola | cytosol | 35.44 | 47.72 |
| KRH26136 | Soybean | cytosol | 21.88 | 46.71 |
| Zm00001d009007_P001 | Maize | cytosol | 17.57 | 46.53 |
| Os01t0677500-00 | Rice | cytosol | 23.88 | 44.93 |
| TraesCS5D01G272300.1 | Wheat | cytosol, nucleus, plastid | 22.8 | 43.27 |
| Zm00001d015028_P001 | Maize | cytosol, mitochondrion, nucleus | 13.1 | 42.08 |
| Zm00001d051483_P001 | Maize | mitochondrion, nucleus, peroxisome | 13.1 | 42.08 |
| HORVU2Hr1G062530.3 | Barley | cytosol | 8.32 | 41.54 |
| HORVU5Hr1G000190.3 | Barley | cytosol | 8.32 | 41.54 |
| KRH26135 | Soybean | cytosol | 24.65 | 41.13 |
| Zm00001d009513_P003 | Maize | cytosol | 25.12 | 41.06 |
| GSMUA_Achr6P22670_001 | Banana | cytosol | 28.2 | 39.96 |
| TraesCS3B01G183600.1 | Wheat | mitochondrion, nucleus | 22.96 | 39.52 |
| TraesCS3D01G164800.2 | Wheat | mitochondrion, nucleus, plastid | 22.96 | 39.42 |
| KXG31477 | Sorghum | mitochondrion, plastid | 22.34 | 39.4 |
| TraesCS3A01G157200.1 | Wheat | mitochondrion, nucleus, plastid | 22.65 | 39.3 |
| TraesCS3D01G164200.1 | Wheat | nucleus, plastid | 26.96 | 38.8 |
| TraesCS3B01G183000.1 | Wheat | nucleus, plastid | 26.96 | 38.72 |
| Os09t0294300-01 | Rice | nucleus | 25.73 | 38.57 |
| Zm00001d039285_P001 | Maize | cytosol, plastid | 26.66 | 38.44 |
| TraesCS3A01G156300.1 | Wheat | nucleus, plastid | 26.81 | 38.33 |
| EES17914 | Sorghum | plastid | 27.12 | 38.26 |
| HORVU3Hr1G031950.4 | Barley | mitochondrion | 21.26 | 37.6 |
| TraesCS3A01G157300.2 | Wheat | nucleus | 21.26 | 37.6 |
| Zm00001d039280_P005 | Maize | mitochondrion, nucleus, plastid | 21.57 | 37.53 |
| TraesCS5D01G272400.1 | Wheat | nucleus | 26.04 | 37.31 |
| KXG31481 | Sorghum | nucleus | 26.35 | 37.25 |
| TraesCS3D01G164900.3 | Wheat | nucleus | 21.11 | 37.23 |
| TraesCS3B01G183800.2 | Wheat | nucleus | 21.11 | 37.23 |
| Zm00001d047959_P001 | Maize | cytosol | 12.79 | 37.22 |
| Os05t0557600-01 | Rice | cytosol | 29.12 | 37.13 |
| HORVU3Hr1G031890.10 | Barley | cytosol, nucleus | 22.65 | 36.93 |
| HORVU3Hr1G031730.4 | Barley | nucleus, plastid | 27.27 | 36.88 |
| Os05t0232500-01 | Rice | nucleus, plastid | 26.35 | 36.62 |
| GSMUA_Achr10P... | Banana | nucleus | 26.81 | 36.55 |
| HORVU1Hr1G029800.11 | Barley | plastid | 26.81 | 36.48 |
| TraesCS5B01G264000.1 | Wheat | nucleus | 25.42 | 36.42 |
| TraesCS1A01G129500.2 | Wheat | nucleus | 27.43 | 36.11 |
| GSMUA_Achr9P00210_001 | Banana | plastid | 29.28 | 35.38 |
| Zm00001d049101_P001 | Maize | cytosol | 8.47 | 35.26 |
| Os01t0232500-01 | Rice | nucleus | 26.19 | 35.05 |
| EES19929 | Sorghum | nucleus | 27.27 | 34.91 |
| TraesCS1B01G146400.2 | Wheat | plastid | 27.27 | 34.1 |
| TraesCS1D01G125200.2 | Wheat | plastid | 27.27 | 33.97 |
| TraesCS3B01G303300.1 | Wheat | nucleus | 27.27 | 33.4 |
| TraesCS3A01G269200.1 | Wheat | nucleus | 27.27 | 33.4 |
| TraesCS3D01G269000.1 | Wheat | nucleus | 27.27 | 33.4 |
| CDX72600 | Canola | cytosol | 6.16 | 33.33 |
| TraesCS1B01G415500.2 | Wheat | nucleus | 28.66 | 33.16 |
| KRH27240 | Soybean | cytosol | 35.59 | 32.81 |
| TraesCS1D01G396000.2 | Wheat | cytosol, mitochondrion, nucleus | 28.2 | 32.74 |
| KXG33109 | Sorghum | nucleus | 26.81 | 32.58 |
| HORVU1Hr1G085630.1 | Barley | cytosol, nucleus | 28.97 | 32.47 |
| TraesCS1A01G388000.1 | Wheat | cytosol, mitochondrion, nucleus | 28.04 | 32.44 |
| Solyc10g007000.2.1 | Tomato | cytosol | 33.13 | 32.23 |
| VIT_19s0014g02760.t01 | Wine grape | nucleus | 36.67 | 31.73 |
| Os01t0233900-01 | Rice | mitochondrion | 22.5 | 31.4 |
| KRH22096 | Soybean | cytosol | 34.98 | 31.4 |
| PGSC0003DMT400064440 | Potato | nucleus | 33.74 | 30.08 |
| HORVU3Hr1G062370.3 | Barley | golgi | 27.27 | 30.05 |
| PGSC0003DMT400039746 | Potato | nucleus | 32.67 | 29.24 |
| Solyc12g013820.1.1 | Tomato | nucleus | 32.97 | 28.84 |
| Os01t0229900-01 | Rice | mitochondrion | 10.48 | 25.0 |
| KRH55293 | Soybean | cytosol, peroxisome, plastid | 29.74 | 22.21 |
| CDY42703 | Canola | cytosol, mitochondrion, nucleus | 21.88 | 21.13 |
| CDY53783 | Canola | nucleus | 24.35 | 18.65 |
| CDY37693 | Canola | nucleus | 24.5 | 18.38 |
| CDX89761 | Canola | nucleus | 24.65 | 15.28 |
| CDY02226 | Canola | endoplasmic reticulum, extracellular | 21.57 | 11.55 |
| Os03t0679300-01 | Rice | mitochondrion | 2.77 | 10.84 |
Protein Annotations
| EnsemblPlants:CDY21838 | EnsemblPlantsGene:GSBRNA2T00018131001 | Gene3D:3.10.110.10 | InterPro:IPR000608 | InterPro:IPR016135 | InterPro:UBQ-conjugat_E2 |
| InterPro:UBQ-conjugating_enzyme/RWD | PANTHER:PTHR44273 | PANTHER:PTHR44273:SF5 | PFAM:PF00179 | PFscan:PS50127 | ProteinID:CDY21838 |
| ProteinID:CDY21838.1 | SEG:seg | SMART:SM00212 | SUPFAM:SSF54495 | UniParc:UPI0004EDB58F | UniProt:A0A078GAU7 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC01g36100DBnaC01g36100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GAU7]
Coordinates
chrLK032125:+:97145..100287
Molecular Weight (calculated)
72057.7 Da
IEP (calculated)
4.546
GRAVY (calculated)
-0.603
Length
649 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPEIAHPVA SCSTTLKAAT PEANGVEQYE GVVNNNNVDS KNKGKAIQLG DDDEQFEGSA SDCYDTTNND ESYPGSSPLS NSLLDPDSLI YEDDDDYSDQ
101: YGYEMEDELE EEDDGADDYV SEYQALFDAK EKDIPAGVEV TMDWLPNSET AKSSGSGKCS RDEHGIKPEA PSSSSKKATV GSGIHSSWNA LPHNSKGVIP
201: NSAYALPMKT QTYNYPAHAL KFSSSSDHLE PQTPDTVMGE APVPAPASAS SGLVLPVPNH PPWYKGHKMY PSARPRVEEV ISAQSCSRVK RNMEDYLGKY
301: LFFKKFDIVE DLGDHEFATR GTTTKQEVIS AQSCSRVKRN MEDYLGKYLF FKKFDIVEDL GDHEFATRGT TTKQHSKEWM KRIQEEWRIL ENDLPEMIFV
401: RAYESRMDLM RAVIVGADGT PYHDGLFFFD IYFPDTYPSV PPMVHYQSGG LRINPNLYNC GKVCLSLLGT WSGAPREKWI PNNSTMLQVL VSIQGLILNE
501: KPYFNEPGYE RTAGSAGGEA QSKAYSENTF LLSLKTMVYN MRRPPKYFED FSCGHFFSCA HDVLRACTAY RNGAPVASLV RGKVKEGEES SERCSEKFSQ
601: DVGTFVDTLL LKEFILLGVL GLEPEEDKSS EIDVAESSNG SPRGGMSSN
101: YGYEMEDELE EEDDGADDYV SEYQALFDAK EKDIPAGVEV TMDWLPNSET AKSSGSGKCS RDEHGIKPEA PSSSSKKATV GSGIHSSWNA LPHNSKGVIP
201: NSAYALPMKT QTYNYPAHAL KFSSSSDHLE PQTPDTVMGE APVPAPASAS SGLVLPVPNH PPWYKGHKMY PSARPRVEEV ISAQSCSRVK RNMEDYLGKY
301: LFFKKFDIVE DLGDHEFATR GTTTKQEVIS AQSCSRVKRN MEDYLGKYLF FKKFDIVEDL GDHEFATRGT TTKQHSKEWM KRIQEEWRIL ENDLPEMIFV
401: RAYESRMDLM RAVIVGADGT PYHDGLFFFD IYFPDTYPSV PPMVHYQSGG LRINPNLYNC GKVCLSLLGT WSGAPREKWI PNNSTMLQVL VSIQGLILNE
501: KPYFNEPGYE RTAGSAGGEA QSKAYSENTF LLSLKTMVYN MRRPPKYFED FSCGHFFSCA HDVLRACTAY RNGAPVASLV RGKVKEGEES SERCSEKFSQ
601: DVGTFVDTLL LKEFILLGVL GLEPEEDKSS EIDVAESSNG SPRGGMSSN
001: MEPNVVEIAT PPAASCSRIR TPTKAETPEV IDVEEYDLQN GGVPNGNNVD YKNKGKAIDF DSMSYGDYGE EDEYAVGSPG DDYGYPESSP LSNSLLDPES
101: LIYEDDENYS EQYDFEMEAE PDNYSMYQDL FDGKDIPTGV EVSMDWFPNS ADKESASSSK SSHANNGNNS SKKATKASGI HSQFSSDMET PVAQPWNALP
201: HKAEGVIPNS AYALPQNSKA FQPPYAVHYS ALKTAFSNYL QPQTPDTVLG EAPAPAAGSS GLLPPNTPGF KSNAARFKEE PPILPPDDSR VKRNMEDYLG
301: LYLFFKRFDI VEDFSDHHYA SKGTTSKQHS KDWAKRIQDE WRILEKDLPE MIFVRAYESR MDLLRAVIIG AQGTPYHDGL FFFDIFFPDT YPSTPPIVHY
401: HSGGLRINPN LYNCGKVCLS LLGTWSGNQR EKWIPNTSTM LQVLVSIQGL ILNQKPYFNE PGYERSAGSA HGESTSKAYS ENTFILSLKT MVYTMRRPPK
501: YFEDFAYGHF FSCAHDVLKA CNAYRNGATP GYLVKGAPDV EENSAGMSSL KFRTDVATFV ETVLLKEFIL LGVLGLEPEE EEKTPETIIV AESSKCTRSR
601: SKRDRVSSS
101: LIYEDDENYS EQYDFEMEAE PDNYSMYQDL FDGKDIPTGV EVSMDWFPNS ADKESASSSK SSHANNGNNS SKKATKASGI HSQFSSDMET PVAQPWNALP
201: HKAEGVIPNS AYALPQNSKA FQPPYAVHYS ALKTAFSNYL QPQTPDTVLG EAPAPAAGSS GLLPPNTPGF KSNAARFKEE PPILPPDDSR VKRNMEDYLG
301: LYLFFKRFDI VEDFSDHHYA SKGTTSKQHS KDWAKRIQDE WRILEKDLPE MIFVRAYESR MDLLRAVIIG AQGTPYHDGL FFFDIFFPDT YPSTPPIVHY
401: HSGGLRINPN LYNCGKVCLS LLGTWSGNQR EKWIPNTSTM LQVLVSIQGL ILNQKPYFNE PGYERSAGSA HGESTSKAYS ENTFILSLKT MVYTMRRPPK
501: YFEDFAYGHF FSCAHDVLKA CNAYRNGATP GYLVKGAPDV EENSAGMSSL KFRTDVATFV ETVLLKEFIL LGVLGLEPEE EEKTPETIIV AESSKCTRSR
601: SKRDRVSSS
Arabidopsis Description
UBC25Probable ubiquitin-conjugating enzyme E2 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUQ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.