CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42541	Soybean	nucleus	95.09	89.87
HORVU3Hr1G109730.1	Barley	cytosol	22.1	61.49
HORVU1Hr1G090980.2	Barley	cytosol	24.78	55.5
PGSC0003DMT400047166	Potato	nucleus	52.68	51.08
Solyc07g053960.2.1	Tomato	nucleus	52.01	50.32
Zm00001d009007_P001	Maize	cytosol	27.23	49.8
GSMUA_Achr7P25120_001	Banana	cytosol	33.04	49.5
TraesCS5D01G272300.1	Wheat	cytosol, nucleus, plastid	36.38	47.66
KRH26136	Soybean	cytosol	32.14	47.37
Os01t0677500-00	Rice	cytosol	34.15	44.35
Zm00001d015028_P001	Maize	cytosol, mitochondrion, nucleus	19.87	44.06
Zm00001d051483_P001	Maize	mitochondrion, nucleus, peroxisome	19.87	44.06
HORVU5Hr1G000190.3	Barley	cytosol	12.72	43.85
HORVU2Hr1G062530.3	Barley	cytosol	12.5	43.08
VIT_12s0028g03630.t01	Wine grape	nucleus	48.88	42.86
KRH26135	Soybean	cytosol	35.94	41.39
TraesCS3D01G164200.1	Wheat	nucleus, plastid	41.07	40.8
TraesCS3B01G183000.1	Wheat	nucleus, plastid	41.07	40.71
TraesCS3B01G183600.1	Wheat	mitochondrion, nucleus	34.15	40.58
TraesCS3D01G164800.2	Wheat	mitochondrion, nucleus, plastid	34.15	40.48
KRH50716	Soybean	nucleus	29.24	40.43
TraesCS3A01G156300.1	Wheat	nucleus, plastid	40.85	40.31
KXG31477	Sorghum	mitochondrion, plastid	33.04	40.22
TraesCS3A01G157200.1	Wheat	mitochondrion, nucleus, plastid	33.48	40.11
TraesCS3B01G183800.2	Wheat	nucleus	32.81	39.95
HORVU3Hr1G031950.4	Barley	mitochondrion	32.59	39.78
TraesCS3D01G164900.3	Wheat	nucleus	32.59	39.67
TraesCS5D01G272400.1	Wheat	nucleus	39.96	39.51
TraesCS3A01G157300.2	Wheat	nucleus	32.37	39.51
Zm00001d039285_P001	Maize	cytosol, plastid	39.51	39.33
EES17914	Sorghum	plastid	40.18	39.13
KRH02368	Soybean	cytosol	25.67	38.98
Zm00001d039280_P005	Maize	mitochondrion, nucleus, plastid	32.37	38.87
GSMUA_Achr6P22670_001	Banana	cytosol	39.73	38.86
TraesCS5B01G264000.1	Wheat	nucleus	39.29	38.85
KXG31481	Sorghum	nucleus	39.73	38.78
Zm00001d047959_P001	Maize	cytosol	19.2	38.56
Os05t0232500-01	Rice	nucleus, plastid	40.18	38.54
GSMUA_Achr10P...	Banana	nucleus	40.85	38.45
Zm00001d009513_P003	Maize	cytosol	33.93	38.29
HORVU3Hr1G031730.4	Barley	nucleus, plastid	40.85	38.12
HORVU3Hr1G031890.10	Barley	cytosol, nucleus	33.71	37.94
HORVU1Hr1G029800.11	Barley	plastid	39.96	37.53
Zm00001d049101_P001	Maize	cytosol	12.95	37.18
Os09t0294300-01	Rice	nucleus	35.71	36.95
Os01t0232500-01	Rice	nucleus	39.96	36.91
TraesCS1A01G129500.2	Wheat	nucleus	40.4	36.71
KRH02367	Soybean	cytosol, golgi, nucleus	27.46	36.39
Os05t0557600-01	Rice	cytosol	40.85	35.95
TraesCS1B01G146400.2	Wheat	plastid	40.4	34.87
TraesCS1D01G125200.2	Wheat	plastid	40.18	34.55
KRH02369	Soybean	cytosol	25.67	34.53
EES19929	Sorghum	nucleus	38.84	34.32
GSMUA_Achr9P00210_001	Banana	plastid	40.85	34.08
TraesCS1B01G415500.2	Wheat	nucleus	41.07	32.8
KXG33109	Sorghum	nucleus	39.06	32.77
TraesCS1A01G388000.1	Wheat	cytosol, mitochondrion, nucleus	40.85	32.62
TraesCS1D01G396000.2	Wheat	cytosol, mitochondrion, nucleus	40.62	32.56
Os01t0233900-01	Rice	mitochondrion	33.48	32.26
TraesCS3A01G269200.1	Wheat	nucleus	37.72	31.89
TraesCS3D01G269000.1	Wheat	nucleus	37.72	31.89
TraesCS3B01G303300.1	Wheat	nucleus	37.5	31.7
HORVU1Hr1G085630.1	Barley	cytosol, nucleus	40.62	31.43
KRH27240	Soybean	cytosol	45.09	28.69
HORVU3Hr1G062370.3	Barley	golgi	37.72	28.69
KRH22096	Soybean	cytosol	45.98	28.49
Os01t0229900-01	Rice	mitochondrion	14.06	23.16
KRH55293	Soybean	cytosol, peroxisome, plastid	38.84	20.02
KRH21442	Soybean	nucleus	35.71	17.41
KRH20454	Soybean	cytosol, nucleus, peroxisome	35.94	17.26
KRH10881	Soybean	nucleus	35.27	17.1
KRH50043	Soybean	cytosol	35.27	17.04
KRG90672	Soybean	nucleus	33.93	13.52
Os03t0679300-01	Rice	mitochondrion	3.35	9.04
KRH36075	Soybean	nucleus	2.23	1.89

Protein Annotations

Gene3D:3.10.110.10	MapMan:35.1	UniProt:A0A0R0K0B6	EMBL:ACUP02003279	EnsemblPlantsGene:GLYMA_05G1402001	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	GO:GO:0031625	GO:GO:0061630	InterPro:IPR000608	InterPro:IPR016135
EnsemblPlants:KRH58633	ProteinID:KRH58633	ProteinID:KRH58633.1	PFAM:PF00179	PFscan:PS50127	PANTHER:PTHR44273
PANTHER:PTHR44273:SF5	SMART:SM00212	SUPFAM:SSF54495	InterPro:UBQ-conjugat_E2	InterPro:UBQ-conjugating_enzyme/RWD	UniParc:UPI0006ED5E8E
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:33281455..33285862

Molecular Weight (calculated)

50078.8 Da

IEP (calculated)

4.406

GRAVY (calculated)

-0.615

Length

448 amino acids

Sequence
(BLAST)

001: DHGNSVTVGE SSGSGDLCKS STSGSLNSNN QNGSNSDISC HDDEDMIDDD ADMIDDDGDE DADYAFDYND DDIYEDDYSS MQDQFDNVDL PPGVEASLPW
101: LKDISSSECK QAIAFSRTES SSKAKVDETD DIVMQKFQQF KQFDTVDSFP DHHYDKEGTK DAQKPKNWAK KIQEEWKILE ENLPETIFVR VCESRMELLR
201: AVIIGPQGTP YHDGLFFFDC LFPSTYPAGP PKVHYHSGGL RLNPNLYQCG KVCLSLLGTW HGRNSENWIP EKSTMLQVLV SIQALILNEK PFFNEPGYPS
301: TYPGSEGQRR SKEYNESTFI LSLKTMMYTL RKPPKHFEEL VAGHFRTRAF EILRACKSYT EGAPVGSVVH NLAPSSGNSS TANAQKEFES AVSRMMNTLI
401: AFFTKNGSTD CDEFRSPEIY SLSAVATSNL EIYKIESGTT TTTTLTQV

Best Arabidopsis Sequence Match ( AT1G53023.1 )
(BLAST)

001: MVEIKDSSNV RKLKEEFLRD FKRFDTVEDF SDHHYAAEGS PAKLSLWHLK FKGRPKNWVK DIQKEWKILD KNLPETIFVR ACESRIDLLR AVIIGAEGTP
101: YHDGLFFFDI QFPDTYPSVP PKVHYHSGGL RINPNLYKCG KVCLSLISTW TGKKREKWLP KESTMLQLLV SIQALILNEK PYYNEPGYEK SMGTPLGESY
201: SKDYSENVFV FSLKTMHFEE FVRSHFFVRS HDIVKACNAY KDGAPVGSID KGGVKKQTRQ RGSLKFRINV TSFMKTVVDE FVNLGAIREA NHRGEPNPTL
301: FSCFFFCYLE LIICSV

Arabidopsis Description

UBC39Putative ubiquitin-conjugating enzyme E2 39 [Source:UniProtKB/Swiss-Prot;Acc:F4HPP7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.